RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 PHYHIPLQ96FC7 376 aa11.62□□□□□ -0.55
SEMA4D-219ENST00000486935 IGHV3OR16-13A0A075B7E8 117 aa11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 ELOA3CA0A087WX78 387 aaPredicted RBP11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 IGHV3-74A0A0B4J1X5 117 aa11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 IGHV3-66A0A0C4DH42 116 aa11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 EIF3GO75821 320 aaKnown RBP eCLIP11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 NPPCP23582 126 aa11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 CD300EQ496F6 205 aaPredicted RBP11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 FAM78BQ5VT40 261 aa11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 SPATA31B1PQ5VZV4 182 aa11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 TEX261Q6UWH6 196 aa11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 LINC00305Q7Z4B0 112 aa11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 OR2K2Q8NGT1 345 aa11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 DYNLRB2Q8TF09 96 aa11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 GATAD1Q8WUU5 269 aa11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 SCRT1Q9BWW7 348 aa11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 SLC25A22Q9H936 323 aa11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 DAZ1Q9NQZ3 744 aaKnown RBP11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 RPRMQ9NS64 109 aa11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 MRPL27Q9P0M9 148 aaKnown RBP11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 SORL1Q92673 2214 aa11.61□□□□□ -0.55
SEMA4D-219ENST00000486935 A0A1W2PPV4 95 aa11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 TMEM213A2RRL7 107 aa11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 A8MWP6 167 aa11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 UMAD1C9J7I0 102 aa11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 K7EMT4 169 aa11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 APOHP02749 345 aaPredicted RBP11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 FOLR2P14207 255 aa11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 CDC34P49427 236 aaPredicted RBP11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 RHOBP62745 196 aa11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 HAGHQ16775 308 aa11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 DEFB114Q30KQ6 69 aa11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 CASC10Q5T4H9 136 aa11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 LEMD1Q68G75 181 aa11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 MIR17HGQ75NE6 70 aa11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 FAM213BQ8TBF2 198 aa11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 NARS2Q96I59 477 aaKnown RBP11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 RNF2Q99496 336 aa11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 SLC25A39Q9BZJ4 359 aaPredicted RBP11.6□□□□□ -0.55
SEMA4D-219ENST00000486935 TRAV5A0A0B4J249 113 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 IGHV7-4-1A0A0J9YVY3 117 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 C2orf70A6NJV1 201 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 ZNF785A8K8V0 405 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 H3BRN7 92 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 IFNA7P01567 189 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 CRYBB3P26998 211 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 S100A7P31151 101 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 FHITP49789 147 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 SULT1A2P50226 295 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 CD81P60033 236 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 GUCA2BQ16661 112 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 MORN5Q5VZ52 161 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 S100A7AQ86SG5 101 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 RPP25LQ8N5L8 163 aaKnown RBP11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 ZNF680Q8NEM1 530 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 CITED4Q96RK1 184 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 SHANK2-AS3Q9BTD1 123 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 MRPL32Q9BYC8 188 aaKnown RBP11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 ACTR3CQ9C0K3 210 aaPredicted RBP11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 SEPSECSQ9HD40 501 aaKnown RBP11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 FUT9Q9Y231 359 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 SELENOKQ9Y6D0 94 aa11.59□□□□□ -0.55
SEMA4D-219ENST00000486935 ZNF98A6NK75 572 aa11.58□□□□□ -0.56
SEMA4D-219ENST00000486935 HMGB3O15347 200 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-219ENST00000486935 CBLN1P23435 193 aa11.58□□□□□ -0.56
SEMA4D-219ENST00000486935 RAB5CP51148 216 aa11.58□□□□□ -0.56
SEMA4D-219ENST00000486935 IFITM2Q01629 132 aa11.58□□□□□ -0.56
SEMA4D-219ENST00000486935 SSX7Q7RTT5 188 aa11.58□□□□□ -0.56
SEMA4D-219ENST00000486935 SPATA25Q9BR10 227 aa11.58□□□□□ -0.56
SEMA4D-219ENST00000486935 UBQLN2Q9UHD9 624 aa11.58□□□□□ -0.56
SEMA4D-219ENST00000486935 PFDN2Q9UHV9 154 aa11.58□□□□□ -0.56
SEMA4D-219ENST00000486935 ZNF705EA8MWA4 302 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-219ENST00000486935 CD7P09564 240 aa11.57□□□□□ -0.56
SEMA4D-219ENST00000486935 ZNF726P1Q15940 193 aa11.57□□□□□ -0.56
SEMA4D-219ENST00000486935 DPPA3Q6W0C5 159 aa11.57□□□□□ -0.56
SEMA4D-219ENST00000486935 RNF141Q8WVD5 230 aa11.57□□□□□ -0.56
SEMA4D-219ENST00000486935 RAB24Q969Q5 203 aa11.57□□□□□ -0.56
SEMA4D-219ENST00000486935 GRAMD2BQ96HH9 432 aa11.57□□□□□ -0.56
SEMA4D-219ENST00000486935 RHPN1-AS1Q9BWJ2 59 aa11.57□□□□□ -0.56
SEMA4D-219ENST00000486935 TECRQ9NZ01 308 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-219ENST00000486935 SMPXQ9UHP9 88 aa11.57□□□□□ -0.56
SEMA4D-219ENST00000486935 U3KQE9 123 aa11.57□□□□□ -0.56
SEMA4D-219ENST00000486935 CTXND1A0A1B0GTU2 59 aa11.56□□□□□ -0.56
SEMA4D-219ENST00000486935 A0A1W2PS18 150 aa11.56□□□□□ -0.56
SEMA4D-219ENST00000486935 CHEK1O14757 476 aa11.56□□□□□ -0.56
SEMA4D-219ENST00000486935 C8orf88P0DMB2 117 aa11.56□□□□□ -0.56
SEMA4D-219ENST00000486935 BMI1P35226 326 aa11.56□□□□□ -0.56
SEMA4D-219ENST00000486935 ZFAND6Q6FIF0 208 aa11.56□□□□□ -0.56
SEMA4D-219ENST00000486935 LCN15Q6UWW0 184 aa11.56□□□□□ -0.56
SEMA4D-219ENST00000486935 DEFB125Q8N687 156 aa11.56□□□□□ -0.56
SEMA4D-219ENST00000486935 SLC25A2Q9BXI2 301 aa11.56□□□□□ -0.56
SEMA4D-219ENST00000486935 TMEM231Q9H6L2 316 aa11.56□□□□□ -0.56
SEMA4D-219ENST00000486935 A0A1B0GV50 99 aa11.55□□□□□ -0.56
SEMA4D-219ENST00000486935 MAP1LC3B2A6NCE7 125 aa11.55□□□□□ -0.56
SEMA4D-219ENST00000486935 BUB3O43684 328 aa11.55□□□□□ -0.56
SEMA4D-219ENST00000486935 OR7C2O60412 319 aa11.55□□□□□ -0.56
SEMA4D-219ENST00000486935 TAS2R45P59539 299 aa11.55□□□□□ -0.56
SEMA4D-219ENST00000486935 KHDC3LQ587J8 217 aa11.55□□□□□ -0.56
SEMA4D-219ENST00000486935 C16orf54Q6UWD8 224 aa11.55□□□□□ -0.56
SEMA4D-219ENST00000486935 OR8I2Q8N0Y5 310 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms