RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 TNP2Q05952 138 aa13.19□□□□□ -0.3
GMDS-205ENST00000486793 FCN2Q15485 313 aa13.19□□□□□ -0.3
GMDS-205ENST00000486793 RNF182Q8N6D2 247 aa13.19□□□□□ -0.3
GMDS-205ENST00000486793 BPIFCQ8NFQ6 507 aa13.19□□□□□ -0.3
GMDS-205ENST00000486793 OR1B1Q8NGR6 318 aa13.19□□□□□ -0.3
GMDS-205ENST00000486793 SOSTQ9BQB4 213 aa13.19□□□□□ -0.3
GMDS-205ENST00000486793 PIGBOS1A0A0B4J2F0 54 aa13.18□□□□□ -0.3
GMDS-205ENST00000486793 FABP12A6NFH5 140 aa13.18□□□□□ -0.3
GMDS-205ENST00000486793 WRBO00258 174 aa13.18□□□□□ -0.3
GMDS-205ENST00000486793 INSP01308 110 aa13.18□□□□□ -0.3
GMDS-205ENST00000486793 SLC25A6P12236 298 aa13.18□□□□□ -0.3
GMDS-205ENST00000486793 RPP30P78346 268 aaKnown RBP13.18□□□□□ -0.3
GMDS-205ENST00000486793 TMEM128Q5BJH2 165 aa13.18□□□□□ -0.3
GMDS-205ENST00000486793 CIB3Q96Q77 187 aaPredicted RBP13.18□□□□□ -0.3
GMDS-205ENST00000486793 TMEM147Q9BVK8 224 aa13.18□□□□□ -0.3
GMDS-205ENST00000486793 CCDC59Q9P031 241 aaKnown RBP13.18□□□□□ -0.3
GMDS-205ENST00000486793 F5H768 121 aa13.17□□□□□ -0.3
GMDS-205ENST00000486793 SYNGR2O43760 224 aa13.17□□□□□ -0.3
GMDS-205ENST00000486793 MED6O75586 246 aa13.17□□□□□ -0.3
GMDS-205ENST00000486793 TNFSF8P32971 234 aa13.17□□□□□ -0.3
GMDS-205ENST00000486793 FGL1Q08830 312 aa13.17□□□□□ -0.3
GMDS-205ENST00000486793 BAP18Q8IXM2 172 aa13.17□□□□□ -0.3
GMDS-205ENST00000486793 LRTM2Q8N967 370 aa13.17□□□□□ -0.3
GMDS-205ENST00000486793 ZNRF2Q8NHG8 242 aa13.17□□□□□ -0.3
GMDS-205ENST00000486793 GPR82Q96P67 336 aa13.17□□□□□ -0.3
GMDS-205ENST00000486793 MRPS26Q9BYN8 205 aaKnown RBP13.17□□□□□ -0.3
GMDS-205ENST00000486793 TRAV12-2A0A075B6T6 113 aa13.16□□□□□ -0.3
GMDS-205ENST00000486793 NBDYA0A0U1RRE5 68 aa13.16□□□□□ -0.3
GMDS-205ENST00000486793 PLAC8L1A1L4L8 177 aa13.16□□□□□ -0.3
GMDS-205ENST00000486793 NUDT3O95989 172 aa13.16□□□□□ -0.3
GMDS-205ENST00000486793 VAMP1P23763 118 aa13.16□□□□□ -0.3
GMDS-205ENST00000486793 TSPOP30536 169 aa13.16□□□□□ -0.3
GMDS-205ENST00000486793 B2MP61769 119 aa13.16□□□□□ -0.3
GMDS-205ENST00000486793 SPANXN5Q5MJ07 72 aa13.16□□□□□ -0.3
GMDS-205ENST00000486793 SLC25A39Q9BZJ4 359 aaPredicted RBP13.16□□□□□ -0.3
GMDS-205ENST00000486793 DNAH5Q8TE73 4624 aa13.16□□□□□ -0.3
GMDS-205ENST00000486793 C16orf90A8MZG2 172 aa13.15□□□□□ -0.3
GMDS-205ENST00000486793 RAB2BQ8WUD1 216 aa13.15□□□□□ -0.3
GMDS-205ENST00000486793 HOXB5P09067 269 aa13.14□□□□□ -0.31
GMDS-205ENST00000486793 S100A7P31151 101 aa13.14□□□□□ -0.31
GMDS-205ENST00000486793 AKR1C1Q04828 323 aa13.14□□□□□ -0.31
GMDS-205ENST00000486793 C6orf223Q8N319 242 aa13.14□□□□□ -0.31
GMDS-205ENST00000486793 ZNF738Q8NE65 137 aa13.14□□□□□ -0.31
GMDS-205ENST00000486793 LINC01587Q99440 93 aa13.14□□□□□ -0.31
GMDS-205ENST00000486793 SLIRPQ9GZT3 109 aaKnown RBP13.14□□□□□ -0.31
GMDS-205ENST00000486793 CBY3A6NI87 242 aa13.13□□□□□ -0.31
GMDS-205ENST00000486793 H3BP45 60 aa13.13□□□□□ -0.31
GMDS-205ENST00000486793 BOLA2-SMG1P6H3BVE0 249 aa13.13□□□□□ -0.31
GMDS-205ENST00000486793 ATP5G1P05496 136 aa13.13□□□□□ -0.31
GMDS-205ENST00000486793 FAUP35544 74 aaKnown RBP13.13□□□□□ -0.31
GMDS-205ENST00000486793 ATP5G3P48201 142 aa13.13□□□□□ -0.31
GMDS-205ENST00000486793 ACOT7LQ6ZUV0 252 aa13.13□□□□□ -0.31
GMDS-205ENST00000486793 SHANK2-AS3Q9BTD1 123 aa13.13□□□□□ -0.31
GMDS-205ENST00000486793 STRAPQ9Y3F4 350 aaKnown RBP13.13□□□□□ -0.31
GMDS-205ENST00000486793 LINC00588Q9Y4M8 146 aa13.13□□□□□ -0.31
GMDS-205ENST00000486793 H3BRN7 92 aa13.12□□□□□ -0.31
GMDS-205ENST00000486793 CDK2AP2O75956 126 aa13.12□□□□□ -0.31
GMDS-205ENST00000486793 SFT2D2O95562 160 aa13.12□□□□□ -0.31
GMDS-205ENST00000486793 IL5P05113 134 aa13.12□□□□□ -0.31
GMDS-205ENST00000486793 PRB4P10163 310 aaPredicted RBP13.12□□□□□ -0.31
GMDS-205ENST00000486793 HTN1P15515 57 aa13.12□□□□□ -0.31
GMDS-205ENST00000486793 TMBIM6P55061 237 aa13.12□□□□□ -0.31
GMDS-205ENST00000486793 CCL18P55774 89 aa13.12□□□□□ -0.31
GMDS-205ENST00000486793 RHOBP62745 196 aa13.12□□□□□ -0.31
GMDS-205ENST00000486793 HIST1H1AQ02539 215 aaPredicted RBP13.12□□□□□ -0.31
GMDS-205ENST00000486793 PPP1R1AQ13522 171 aa13.12□□□□□ -0.31
GMDS-205ENST00000486793 CYP2G1PQ6ZSU1 146 aa13.12□□□□□ -0.31
GMDS-205ENST00000486793 TMEM144Q7Z5S9 345 aa13.12□□□□□ -0.31
GMDS-205ENST00000486793 APOBP04114 4563 aaKnown RBP13.12□□□□□ -0.31
GMDS-205ENST00000486793 SMCO3A2RU48 225 aa13.11□□□□□ -0.31
GMDS-205ENST00000486793 HYPMO75409 117 aa13.11□□□□□ -0.31
GMDS-205ENST00000486793 RPL7P18124 248 aaKnown RBP13.11□□□□□ -0.31
GMDS-205ENST00000486793 CXCL3P19876 107 aa13.11□□□□□ -0.31
GMDS-205ENST00000486793 TAS2R60P59551 318 aa13.11□□□□□ -0.31
GMDS-205ENST00000486793 RAP2BP61225 183 aa13.11□□□□□ -0.31
GMDS-205ENST00000486793 TOMM5Q8N4H5 51 aa13.11□□□□□ -0.31
GMDS-205ENST00000486793 OR8A1Q8NGG7 326 aa13.11□□□□□ -0.31
GMDS-205ENST00000486793 TRIM63Q969Q1 353 aa13.11□□□□□ -0.31
GMDS-205ENST00000486793 SLC25A21Q9BQT8 299 aaPredicted RBP13.11□□□□□ -0.31
GMDS-205ENST00000486793 PPP1R14DQ9NXH3 145 aa13.11□□□□□ -0.31
GMDS-205ENST00000486793 HIGD1AQ9Y241 93 aa13.11□□□□□ -0.31
GMDS-205ENST00000486793 NACAE9PAV3 2078 aa13.1□□□□□ -0.31
GMDS-205ENST00000486793 AP3S2P59780 193 aa13.1□□□□□ -0.31
GMDS-205ENST00000486793 PSG3Q16557 428 aa13.1□□□□□ -0.31
GMDS-205ENST00000486793 PYDC2Q56P42 97 aa13.1□□□□□ -0.31
GMDS-205ENST00000486793 MAPKAPK5-AS1Q8N8E1 139 aa13.1□□□□□ -0.31
GMDS-205ENST00000486793 MCFD2Q8NI22 146 aa13.1□□□□□ -0.31
GMDS-205ENST00000486793 RNF141Q8WVD5 230 aa13.1□□□□□ -0.31
GMDS-205ENST00000486793 UHRF2Q96PU4 802 aa13.1□□□□□ -0.31
GMDS-205ENST00000486793 BCL7BQ9BQE9 202 aa13.1□□□□□ -0.31
GMDS-205ENST00000486793 OR5G3P0C626 314 aa13.09□□□□□ -0.31
GMDS-205ENST00000486793 ID3Q02535 119 aa13.09□□□□□ -0.31
GMDS-205ENST00000486793 TMEM256Q8N2U0 113 aa13.09□□□□□ -0.31
GMDS-205ENST00000486793 LRRC20Q8TCA0 184 aa13.09□□□□□ -0.31
GMDS-205ENST00000486793 TIMM8BQ9Y5J9 83 aaPredicted RBP13.09□□□□□ -0.31
GMDS-205ENST00000486793 LINC00869P0C866 280 aa13.08□□□□□ -0.32
GMDS-205ENST00000486793 PLP1P60201 277 aa13.08□□□□□ -0.32
GMDS-205ENST00000486793 POLR2GP62487 172 aaKnown RBP eCLIP13.08□□□□□ -0.32
GMDS-205ENST00000486793 SSX7Q7RTT5 188 aa13.08□□□□□ -0.32
GMDS-205ENST00000486793 C16orf74Q96GX8 76 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms