RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.27□□□□□ -2.21
SMC4-218ENST00000486711 TRBV6-4A0A1B0GX49 114 aa1.27□□□□□ -2.21
SMC4-218ENST00000486711 TMEM238C9JI98 176 aa1.27□□□□□ -2.21
SMC4-218ENST00000486711 E7EUB6 86 aa1.27□□□□□ -2.21
SMC4-218ENST00000486711 M0R233 179 aa1.27□□□□□ -2.21
SMC4-218ENST00000486711 ERC2-IT1O76042 136 aa1.27□□□□□ -2.21
SMC4-218ENST00000486711 DNAL4O96015 105 aa1.27□□□□□ -2.21
SMC4-218ENST00000486711 TRGC2P03986 189 aa1.27□□□□□ -2.21
SMC4-218ENST00000486711 IFNA4P05014 189 aa1.27□□□□□ -2.21
SMC4-218ENST00000486711 CD2P06729 351 aa1.27□□□□□ -2.21
SMC4-218ENST00000486711 ZNF25P17030 456 aaPredicted RBP1.27□□□□□ -2.21
SMC4-218ENST00000486711 CDK6Q00534 326 aa1.27□□□□□ -2.21
SMC4-218ENST00000486711 STX19Q8N4C7 294 aa1.27□□□□□ -2.21
SMC4-218ENST00000486711 SMIM20Q8N5G0 67 aa1.27□□□□□ -2.21
SMC4-218ENST00000486711 PRRT1Q99946 306 aa1.27□□□□□ -2.21
SMC4-218ENST00000486711 BIN3Q9NQY0 253 aa1.27□□□□□ -2.21
SMC4-218ENST00000486711 FLG2Q5D862 2391 aaPredicted RBP1.27□□□□□ -2.21
SMC4-218ENST00000486711 TLCD2A6NGC4 264 aa1.26□□□□□ -2.21
SMC4-218ENST00000486711 MFSD11O43934 449 aa1.26□□□□□ -2.21
SMC4-218ENST00000486711 RAB5CP51148 216 aa1.26□□□□□ -2.21
SMC4-218ENST00000486711 TMBIM6P55061 237 aa1.26□□□□□ -2.21
SMC4-218ENST00000486711 ARPP19P56211 112 aa1.26□□□□□ -2.21
SMC4-218ENST00000486711 POP5Q969H6 163 aaKnown RBP1.26□□□□□ -2.21
SMC4-218ENST00000486711 CHCHD1Q96BP2 118 aaKnown RBP1.26□□□□□ -2.21
SMC4-218ENST00000486711 MUCL1Q96DR8 90 aa1.26□□□□□ -2.21
SMC4-218ENST00000486711 GPX7Q96SL4 187 aaPredicted RBP1.26□□□□□ -2.21
SMC4-218ENST00000486711 MAP1LC3BQ9GZQ8 125 aa1.26□□□□□ -2.21
SMC4-218ENST00000486711 TMEM14CQ9P0S9 112 aa1.26□□□□□ -2.21
SMC4-218ENST00000486711 UFC1Q9Y3C8 167 aa1.26□□□□□ -2.21
SMC4-218ENST00000486711 CACNA1BQ00975 2339 aa1.26□□□□□ -2.21
SMC4-218ENST00000486711 ADGRB2O60241 1585 aa1.25□□□□□ -2.21
SMC4-218ENST00000486711 ARHGEF11O15085 1522 aa1.25□□□□□ -2.21
SMC4-218ENST00000486711 HELZ2Q9BYK8 2649 aaKnown RBP1.25□□□□□ -2.21
SMC4-218ENST00000486711 CCL25O15444 150 aa1.25□□□□□ -2.21
SMC4-218ENST00000486711 INSL3P51460 131 aa1.25□□□□□ -2.21
SMC4-218ENST00000486711 TRIQKQ629K1 86 aa1.25□□□□□ -2.21
SMC4-218ENST00000486711 PPP1R2P3Q6NXS1 205 aa1.25□□□□□ -2.21
SMC4-218ENST00000486711 GRINAQ7Z429 371 aa1.25□□□□□ -2.21
SMC4-218ENST00000486711 TEN1Q86WV5 123 aa1.25□□□□□ -2.21
SMC4-218ENST00000486711 NUP35Q8NFH5 326 aa1.25□□□□□ -2.21
SMC4-218ENST00000486711 LINC00052Q96N35 136 aa1.25□□□□□ -2.21
SMC4-218ENST00000486711 HOPXQ9BPY8 73 aaPredicted RBP1.25□□□□□ -2.21
SMC4-218ENST00000486711 CACYBPQ9HB71 228 aaKnown RBP1.25□□□□□ -2.21
SMC4-218ENST00000486711 OR52A1Q9UKL2 312 aa1.25□□□□□ -2.21
SMC4-218ENST00000486711 POLEQ07864 2286 aa1.25□□□□□ -2.21
SMC4-218ENST00000486711 TECTAO75443 2155 aa1.25□□□□□ -2.21
SMC4-218ENST00000486711 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
SMC4-218ENST00000486711 EXPH5Q8NEV8 1989 aa1.25□□□□□ -2.21
SMC4-218ENST00000486711 CEP164Q9UPV0 1460 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 COL6A6A6NMZ7 2263 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 TRAV5A0A0B4J249 113 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 IGHV1-58A0A0C4DH39 117 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 OR2T8A6NH00 312 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 CXCL1P09341 107 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 G0S2P27469 103 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 SERPINB1P30740 379 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 KLRD1Q13241 179 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 C3orf33Q6P1S2 294 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 PATE2Q6UY27 113 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 ZNF833PQ6ZTB9 187 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 NEK7Q8TDX7 302 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 RAB37Q96AX2 223 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 BOLA2Q9H3K6 86 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 LAMTOR3Q9UHA4 124 aa1.24□□□□□ -2.21
SMC4-218ENST00000486711 TNRC6BQ9UPQ9 1833 aaKnown RBP1.24□□□□□ -2.21
SMC4-218ENST00000486711 EML6Q6ZMW3 1958 aa1.23□□□□□ -2.21
SMC4-218ENST00000486711 F8W1H4 67 aa1.23□□□□□ -2.21
SMC4-218ENST00000486711 NUPR1O60356 82 aa1.23□□□□□ -2.21
SMC4-218ENST00000486711 HIST1H2BKO60814 126 aa1.23□□□□□ -2.21
SMC4-218ENST00000486711 HIST1H2BJP06899 126 aa1.23□□□□□ -2.21
SMC4-218ENST00000486711 CXCL8P10145 99 aa1.23□□□□□ -2.21
SMC4-218ENST00000486711 GNG10P50151 68 aa1.23□□□□□ -2.21
SMC4-218ENST00000486711 C1orf134Q5TEV5 83 aa1.23□□□□□ -2.21
SMC4-218ENST00000486711 C1orf140Q5VVS0 124 aa1.23□□□□□ -2.21
SMC4-218ENST00000486711 LINC00322Q6ZN03 302 aaPredicted RBP1.23□□□□□ -2.21
SMC4-218ENST00000486711 GKN2Q86XP6 184 aa1.23□□□□□ -2.21
SMC4-218ENST00000486711 FAM24BQ8N5W8 94 aa1.23□□□□□ -2.21
SMC4-218ENST00000486711 PLEKHB2Q96CS7 222 aa1.23□□□□□ -2.21
SMC4-218ENST00000486711 RTL8AQ9BWD3 113 aa1.23□□□□□ -2.21
SMC4-218ENST00000486711 NISCHQ9Y2I1 1504 aa1.23□□□□□ -2.21
SMC4-218ENST00000486711 DLG5Q8TDM6 1919 aa1.23□□□□□ -2.21
SMC4-218ENST00000486711 ROCK1Q13464 1354 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 A0A087WSZ3 146 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 PPP5D1E7EU14 171 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 H3BRM9 83 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 GPR31O00270 319 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 RER1O15258 196 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 PIAS1O75925 651 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 CSN2P05814 226 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 IDO1P14902 403 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 S100A5P33763 92 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 GLRXP35754 106 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 PSG9Q00887 426 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 SPRNQ5BIV9 151 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 DYDC1Q8WWB3 177 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 HYLS1Q96M11 299 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 AMELYQ99218 206 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 MED11Q9P086 117 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 NCAPD3P42695 1498 aa1.22□□□□□ -2.21
SMC4-218ENST00000486711 SCN8AQ9UQD0 1980 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms