RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 KLHDC1Q8N7A1 406 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 ZNF596Q8TC21 504 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 GRAMD2BQ96HH9 432 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 PAXXQ9BUH6 204 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 TNFRSF19Q9NS68 423 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 AURKAIP1Q9NWT8 199 aaPredicted RBP7.18□□□□□ -1.26
COL12A1-208ENST00000486533 MRPL27Q9P0M9 148 aaKnown RBP7.18□□□□□ -1.26
COL12A1-208ENST00000486533 SMIM27A0A1W2PRY6 76 aa7.17□□□□□ -1.26
COL12A1-208ENST00000486533 H0YJW9 148 aa7.17□□□□□ -1.26
COL12A1-208ENST00000486533 HOXA3O43365 443 aaPredicted RBP7.17□□□□□ -1.26
COL12A1-208ENST00000486533 SERF1AO75920 110 aa7.17□□□□□ -1.26
COL12A1-208ENST00000486533 MGST1P10620 155 aaKnown RBP7.17□□□□□ -1.26
COL12A1-208ENST00000486533 UBE2G1P62253 170 aa7.17□□□□□ -1.26
COL12A1-208ENST00000486533 DEFB112Q30KQ8 113 aa7.17□□□□□ -1.26
COL12A1-208ENST00000486533 RUSC1-AS1Q66K80 236 aa7.17□□□□□ -1.26
COL12A1-208ENST00000486533 FAM216BQ8N7L0 139 aa7.17□□□□□ -1.26
COL12A1-208ENST00000486533 THAP8Q8NA92 274 aa7.17□□□□□ -1.26
COL12A1-208ENST00000486533 LEAP2Q969E1 77 aa7.17□□□□□ -1.26
COL12A1-208ENST00000486533 BORCS7Q96B45 105 aa7.17□□□□□ -1.26
COL12A1-208ENST00000486533 HSPB9Q9BQS6 159 aa7.17□□□□□ -1.26
COL12A1-208ENST00000486533 MIEN1Q9BRT3 115 aa7.17□□□□□ -1.26
COL12A1-208ENST00000486533 SERTAD4Q9NUC0 356 aa7.17□□□□□ -1.26
COL12A1-208ENST00000486533 AMMECR1Q9Y4X0 333 aaPredicted RBP7.17□□□□□ -1.26
COL12A1-208ENST00000486533 C20orf202A1L168 122 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 SLC17A3O00476 420 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 TNFRSF13BO14836 293 aaPredicted RBP7.16□□□□□ -1.26
COL12A1-208ENST00000486533 TCAPO15273 167 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 IGHV3-7P01780 117 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 APCSP02743 223 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 ZNF137PP52743 207 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 ARF6P62330 175 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 SUMO1P63165 101 aaKnown RBP7.16□□□□□ -1.26
COL12A1-208ENST00000486533 TCF23Q7RTU1 214 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 TGIF2LXQ8IUE1 241 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 TMEM256Q8N2U0 113 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 OR9G1Q8NH87 305 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 IGF2BP2-AS1Q96M15 143 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 ZNF747Q9BV97 191 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 MRPL20Q9BYC9 149 aaKnown RBP7.16□□□□□ -1.26
COL12A1-208ENST00000486533 RNF24Q9Y225 148 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 CENPVL3A0A0U1RRI6 287 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 GRIFINA4D1Z8 144 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 PEX7O00628 323 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 ZNF253O75346 499 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 RPLP1P05386 114 aaKnown RBP7.16□□□□□ -1.26
COL12A1-208ENST00000486533 AMTP48728 403 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 PMCHL1Q16048 86 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 CT83Q5H943 113 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 DUX4L9Q6RFH8 374 aaPredicted RBP7.16□□□□□ -1.26
COL12A1-208ENST00000486533 ZNF705AQ6ZN79 300 aaPredicted RBP7.16□□□□□ -1.26
COL12A1-208ENST00000486533 TMEM136Q6ZRR5 245 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 TEX45Q8NA69 505 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 MISP3Q96FF7 219 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 TRGV9Q99603 122 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 SSBP4Q9BWG4 385 aaPredicted RBP7.16□□□□□ -1.26
COL12A1-208ENST00000486533 SIRPDQ9H106 197 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 ONECUT1Q9UBC0 465 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 KAAG1Q9UBP8 84 aa7.16□□□□□ -1.26
COL12A1-208ENST00000486533 MEGF8Q7Z7M0 2845 aa7.15□□□□□ -1.26
COL12A1-208ENST00000486533 TRRAPQ9Y4A5 3859 aa7.15□□□□□ -1.26
COL12A1-208ENST00000486533 GGTLC3B5MD39 225 aa7.15□□□□□ -1.27
COL12A1-208ENST00000486533 FCN3O75636 299 aa7.15□□□□□ -1.27
COL12A1-208ENST00000486533 SELLP14151 372 aa7.15□□□□□ -1.27
COL12A1-208ENST00000486533 PRRX1P54821 245 aa7.15□□□□□ -1.27
COL12A1-208ENST00000486533 H1FXQ92522 213 aaKnown RBP7.15□□□□□ -1.27
COL12A1-208ENST00000486533 FMC1Q96HJ9 113 aa7.15□□□□□ -1.27
COL12A1-208ENST00000486533 TMEM68Q96MH6 324 aa7.15□□□□□ -1.27
COL12A1-208ENST00000486533 SRSF8Q9BRL6 282 aaKnown RBP7.15□□□□□ -1.27
COL12A1-208ENST00000486533 SLC25A2Q9BXI2 301 aa7.15□□□□□ -1.27
COL12A1-208ENST00000486533 ZNF355PQ9NSJ1 428 aa7.15□□□□□ -1.27
COL12A1-208ENST00000486533 IGHV1-69DA0A0B4J2H0 117 aa7.14□□□□□ -1.27
COL12A1-208ENST00000486533 DIRC3C9JPN6 131 aa7.14□□□□□ -1.27
COL12A1-208ENST00000486533 ZNF324O75467 553 aaPredicted RBP7.14□□□□□ -1.27
COL12A1-208ENST00000486533 IGHV1-69P01742 117 aa7.14□□□□□ -1.27
COL12A1-208ENST00000486533 IGKV1-16P04430 117 aa7.14□□□□□ -1.27
COL12A1-208ENST00000486533 GPX1P07203 203 aa7.14□□□□□ -1.27
COL12A1-208ENST00000486533 TPTE2P1Q5T6R2 138 aa7.14□□□□□ -1.27
COL12A1-208ENST00000486533 Q6YL49 198 aa7.14□□□□□ -1.27
COL12A1-208ENST00000486533 Q6ZWC4 215 aa7.14□□□□□ -1.27
COL12A1-208ENST00000486533 VMO1Q7Z5L0 202 aa7.14□□□□□ -1.27
COL12A1-208ENST00000486533 ZNF329Q86UD4 541 aa7.14□□□□□ -1.27
COL12A1-208ENST00000486533 GNB4Q9HAV0 340 aa7.14□□□□□ -1.27
COL12A1-208ENST00000486533 ZNF492Q9P255 531 aa7.14□□□□□ -1.27
COL12A1-208ENST00000486533 UQCR10Q9UDW1 63 aa7.14□□□□□ -1.27
COL12A1-208ENST00000486533 PSMB11A5LHX3 300 aa7.13□□□□□ -1.27
COL12A1-208ENST00000486533 FAM231BA6NCW3 169 aa7.13□□□□□ -1.27
COL12A1-208ENST00000486533 SRRM4A7MD48 611 aaKnown RBP7.13□□□□□ -1.27
COL12A1-208ENST00000486533 RBP4P02753 201 aa7.13□□□□□ -1.27
COL12A1-208ENST00000486533 RPL27AP46776 148 aaKnown RBP7.13□□□□□ -1.27
COL12A1-208ENST00000486533 KRTDAPP60985 99 aa7.13□□□□□ -1.27
COL12A1-208ENST00000486533 OR5I1Q13606 314 aa7.13□□□□□ -1.27
COL12A1-208ENST00000486533 KLF5Q13887 457 aaPredicted RBP7.13□□□□□ -1.27
COL12A1-208ENST00000486533 C5orf17Q8NAS9 161 aa7.13□□□□□ -1.27
COL12A1-208ENST00000486533 TSKUQ8WUA8 353 aa7.13□□□□□ -1.27
COL12A1-208ENST00000486533 ZNF503Q96F45 646 aa7.13□□□□□ -1.27
COL12A1-208ENST00000486533 FAM167A-AS1Q96KT0 104 aa7.13□□□□□ -1.27
COL12A1-208ENST00000486533 RNF5Q99942 180 aa7.13□□□□□ -1.27
COL12A1-208ENST00000486533 GFRA4Q9GZZ7 299 aa7.13□□□□□ -1.27
COL12A1-208ENST00000486533 RNASE7Q9H1E1 156 aaKnown RBP7.13□□□□□ -1.27
COL12A1-208ENST00000486533 TBL2Q9Y4P3 447 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms