RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 OR9G4Q8NGQ1 327 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 FAM213BQ8TBF2 198 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 TMEM190Q8WZ59 177 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 DLX4Q92988 240 aaPredicted RBP5.34□□□□□ -1.55
UBR4-214ENST00000486515 RAX2Q96IS3 184 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 SH3BGRL3Q9H299 93 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 CYTL1Q9NRR1 136 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 TECRQ9NZ01 308 aaKnown RBP5.34□□□□□ -1.55
UBR4-214ENST00000486515 MRPL27Q9P0M9 148 aaKnown RBP5.34□□□□□ -1.55
UBR4-214ENST00000486515 UBQLN2Q9UHD9 624 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 RYR2Q92736 4967 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 IGHV3OR16-8A0A075B7F1 116 aa5.33□□□□□ -1.56
UBR4-214ENST00000486515 WI2-2373I1.2A0A1W2PRP0 233 aa5.33□□□□□ -1.56
UBR4-214ENST00000486515 HELTA6NFD8 242 aa5.33□□□□□ -1.56
UBR4-214ENST00000486515 ZNF785A8K8V0 405 aa5.33□□□□□ -1.56
UBR4-214ENST00000486515 ZNF705EA8MWA4 302 aaPredicted RBP5.33□□□□□ -1.56
UBR4-214ENST00000486515 F8W735 103 aaPredicted RBP5.33□□□□□ -1.56
UBR4-214ENST00000486515 DNASE2O00115 360 aaPredicted RBP5.33□□□□□ -1.56
UBR4-214ENST00000486515 ZNF207O43670 478 aaKnown RBP5.33□□□□□ -1.56
UBR4-214ENST00000486515 HBE1P02100 147 aa5.33□□□□□ -1.56
UBR4-214ENST00000486515 H2AFB1P0C5Y9 115 aa5.33□□□□□ -1.56
UBR4-214ENST00000486515 RPL7P18124 248 aaKnown RBP5.33□□□□□ -1.56
UBR4-214ENST00000486515 ATF4P18848 351 aaPredicted RBP5.33□□□□□ -1.56
UBR4-214ENST00000486515 INSL3P51460 131 aa5.33□□□□□ -1.56
UBR4-214ENST00000486515 ZNF124Q15973 351 aa5.33□□□□□ -1.56
UBR4-214ENST00000486515 FAM74A1Q5RGS3 127 aa5.33□□□□□ -1.56
UBR4-214ENST00000486515 C1orf194Q5T5A4 169 aa5.33□□□□□ -1.56
UBR4-214ENST00000486515 TEX261Q6UWH6 196 aa5.33□□□□□ -1.56
UBR4-214ENST00000486515 C18orf65Q6ZTR6 163 aa5.33□□□□□ -1.56
UBR4-214ENST00000486515 SLC25A39Q9BZJ4 359 aaPredicted RBP5.33□□□□□ -1.56
UBR4-214ENST00000486515 FUT9Q9Y231 359 aa5.33□□□□□ -1.56
UBR4-214ENST00000486515 IGHV7-4-1A0A0J9YVY3 117 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 CTXND1A0A1B0GTU2 59 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 SEC14L6B5MCN3 397 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 GATCO43716 136 aaKnown RBP5.32□□□□□ -1.56
UBR4-214ENST00000486515 CXorf1O96002 111 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 IFNA1P01562 189 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 C8orf88P0DMB2 117 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 FOLR2P14207 255 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 CBLN1P23435 193 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 CRYBB3P26998 211 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 MEOX2P50222 304 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 SULT1A2P50226 295 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 PPT1P50897 306 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 KRTAP10-3P60369 221 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 USF2Q15853 346 aaPredicted RBP5.32□□□□□ -1.56
UBR4-214ENST00000486515 TM4SF20Q53R12 229 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 C9orf66Q5T8R8 295 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 SAMD13Q5VXD3 122 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 LCN12Q6JVE5 192 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 CFAP161Q6P656 301 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 UNQ9165/PRO28630Q6UXU0 137 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 PQLC2Q6ZP29 291 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 ZNF767PQ75MW2 155 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 SFT2D1Q8WV19 159 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 RCC1LQ96I51 464 aaKnown RBP5.32□□□□□ -1.56
UBR4-214ENST00000486515 UHRF2Q96PU4 802 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 RHPN1-AS1Q9BWJ2 59 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 TMEM167BQ9NRX6 74 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 CBY1Q9Y3M2 126 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 PLXNB1O43157 2135 aa5.32□□□□□ -1.56
UBR4-214ENST00000486515 IGHV3OR16-13A0A075B7E8 117 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 IGHV3-49A0A0A0MS15 119 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 IGHV3-74A0A0B4J1X5 117 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 IGHV3-66A0A0C4DH42 116 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 MAP1LC3B2A6NCE7 125 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 C2orf70A6NJV1 201 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 ZNF98A6NK75 572 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 A8MWP6 167 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 H3BRN7 92 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 ID1P41134 155 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 UBE2L3P68036 154 aaKnown RBP5.31□□□□□ -1.56
UBR4-214ENST00000486515 FHL3Q13643 280 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 GUK1Q16774 197 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 LCN15Q6UWW0 184 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 SIGLEC15Q6ZMC9 328 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 IL34Q6ZMJ4 242 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 ZNF680Q8NEM1 530 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 TMEM37Q8WXS4 190 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 RAB24Q969Q5 203 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 SAT2Q96F10 170 aaPredicted RBP5.31□□□□□ -1.56
UBR4-214ENST00000486515 SHANK2-AS3Q9BTD1 123 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 PAXXQ9BUH6 204 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 MAP1LC3BQ9GZQ8 125 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 OR51M1Q9H341 326 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 AAMDCQ9H7C9 122 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 ZFAND3Q9H8U3 227 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 RPRMQ9NS64 109 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 SMPXQ9UHP9 88 aa5.31□□□□□ -1.56
UBR4-214ENST00000486515 NOTCH3Q9UM47 2321 aa5.3□□□□□ -1.56
UBR4-214ENST00000486515 IGKV3-7A0A075B6H7 116 aa5.3□□□□□ -1.56
UBR4-214ENST00000486515 CHEK1O14757 476 aa5.3□□□□□ -1.56
UBR4-214ENST00000486515 BUB3O43684 328 aa5.3□□□□□ -1.56
UBR4-214ENST00000486515 PSMB3P49720 205 aa5.3□□□□□ -1.56
UBR4-214ENST00000486515 CMC4P56277 68 aaPredicted RBP5.3□□□□□ -1.56
UBR4-214ENST00000486515 SNRPD3P62318 126 aaKnown RBP5.3□□□□□ -1.56
UBR4-214ENST00000486515 PSG9Q00887 426 aa5.3□□□□□ -1.56
UBR4-214ENST00000486515 GUCA2BQ16661 112 aa5.3□□□□□ -1.56
UBR4-214ENST00000486515 MIR17HGQ75NE6 70 aa5.3□□□□□ -1.56
UBR4-214ENST00000486515 TCF24Q7RTU0 167 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms