RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 PFDN2Q9UHV9 154 aa12.53□□□□□ -0.4
THBS3-207ENST00000486260 A0A1W2PS18 150 aa12.53□□□□□ -0.4
THBS3-207ENST00000486260 SEC14L6B5MCN3 397 aa12.53□□□□□ -0.4
THBS3-207ENST00000486260 S100A7P31151 101 aa12.53□□□□□ -0.4
THBS3-207ENST00000486260 RAB24Q969Q5 203 aa12.53□□□□□ -0.4
THBS3-207ENST00000486260 MARC2Q969Z3 335 aa12.53□□□□□ -0.4
THBS3-207ENST00000486260 RAB5CP51148 216 aa12.52□□□□□ -0.41
THBS3-207ENST00000486260 C16orf54Q6UWD8 224 aa12.52□□□□□ -0.41
THBS3-207ENST00000486260 MLXQ9UH92 298 aa12.52□□□□□ -0.41
THBS3-207ENST00000486260 IFNA7P01567 189 aa12.51□□□□□ -0.41
THBS3-207ENST00000486260 CD33P20138 364 aa12.51□□□□□ -0.41
THBS3-207ENST00000486260 DPPA3Q6W0C5 159 aa12.51□□□□□ -0.41
THBS3-207ENST00000486260 OR8I2Q8N0Y5 310 aa12.51□□□□□ -0.41
THBS3-207ENST00000486260 RNF141Q8WVD5 230 aa12.51□□□□□ -0.41
THBS3-207ENST00000486260 FAM167A-AS1Q96KT0 104 aa12.51□□□□□ -0.41
THBS3-207ENST00000486260 SLC25A2Q9BXI2 301 aa12.51□□□□□ -0.41
THBS3-207ENST00000486260 CTXND1A0A1B0GTU2 59 aa12.51□□□□□ -0.41
THBS3-207ENST00000486260 LINC00862A6NCI5 91 aa12.51□□□□□ -0.41
THBS3-207ENST00000486260 SAP30O75446 220 aa12.51□□□□□ -0.41
THBS3-207ENST00000486260 C1orf194Q5T5A4 169 aa12.51□□□□□ -0.41
THBS3-207ENST00000486260 GLMPQ8WWB7 406 aa12.51□□□□□ -0.41
THBS3-207ENST00000486260 GRAMD2BQ96HH9 432 aa12.51□□□□□ -0.41
THBS3-207ENST00000486260 TMEM231Q9H6L2 316 aa12.51□□□□□ -0.41
THBS3-207ENST00000486260 TECRQ9NZ01 308 aaKnown RBP12.51□□□□□ -0.41
THBS3-207ENST00000486260 ZNF705EA8MWA4 302 aaPredicted RBP12.5□□□□□ -0.41
THBS3-207ENST00000486260 BMI1P35226 326 aa12.5□□□□□ -0.41
THBS3-207ENST00000486260 LCN15Q6UWW0 184 aa12.5□□□□□ -0.41
THBS3-207ENST00000486260 WFDC9Q8NEX5 89 aa12.5□□□□□ -0.41
THBS3-207ENST00000486260 SIGLEC8Q9NYZ4 499 aa12.5□□□□□ -0.41
THBS3-207ENST00000486260 UBQLN2Q9UHD9 624 aa12.5□□□□□ -0.41
THBS3-207ENST00000486260 STAG3L2P0CL84 134 aa12.49□□□□□ -0.41
THBS3-207ENST00000486260 STAG3L3P0CL85 134 aa12.49□□□□□ -0.41
THBS3-207ENST00000486260 TAS2R45P59539 299 aa12.49□□□□□ -0.41
THBS3-207ENST00000486260 SMUG1Q53HV7 270 aa12.49□□□□□ -0.41
THBS3-207ENST00000486260 DYNLRB2Q8TF09 96 aa12.49□□□□□ -0.41
THBS3-207ENST00000486260 RNF24Q9Y225 148 aa12.49□□□□□ -0.41
THBS3-207ENST00000486260 PKD1L1Q8TDX9 2849 aa12.49□□□□□ -0.41
THBS3-207ENST00000486260 LOC105371267A0A1B0GV96 52 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 OR7C2O60412 319 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 SNRPCP09234 159 aaKnown RBP12.48□□□□□ -0.41
THBS3-207ENST00000486260 PYYP10082 97 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 FGF8P55075 233 aaPredicted RBP12.48□□□□□ -0.41
THBS3-207ENST00000486260 KHDC3LQ587J8 217 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 SIGLEC15Q6ZMC9 328 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 TCF24Q7RTU0 167 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 BPIFA4PQ86YQ2 179 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 SFT2D1Q8WV19 159 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 ZNF503Q96F45 646 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 SMAD5-AS1Q9Y6J3 95 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 MAP1LC3B2A6NCE7 125 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 MRPS12O15235 138 aaKnown RBP12.48□□□□□ -0.41
THBS3-207ENST00000486260 H2AFB1P0C5Y9 115 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 ARL14EPLP0DKL9 152 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 GP9P14770 177 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 RPL7P18124 248 aaKnown RBP12.48□□□□□ -0.41
THBS3-207ENST00000486260 RPL11P62913 178 aaKnown RBP12.48□□□□□ -0.41
THBS3-207ENST00000486260 DEFB114Q30KQ6 69 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 PCNPQ8WW12 178 aaKnown RBP12.48□□□□□ -0.41
THBS3-207ENST00000486260 MAP1LC3BQ9GZQ8 125 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 OR51M1Q9H341 326 aa12.48□□□□□ -0.41
THBS3-207ENST00000486260 IGKV3-7A0A075B6H7 116 aa12.47□□□□□ -0.41
THBS3-207ENST00000486260 A0A1B0GV50 99 aa12.47□□□□□ -0.41
THBS3-207ENST00000486260 OR10J4P0C629 311 aa12.47□□□□□ -0.41
THBS3-207ENST00000486260 FAM90A2PQ658T7 463 aa12.47□□□□□ -0.41
THBS3-207ENST00000486260 MBD3L1Q8WWY6 194 aa12.47□□□□□ -0.41
THBS3-207ENST00000486260 GPR82Q96P67 336 aa12.47□□□□□ -0.41
THBS3-207ENST00000486260 PAXXQ9BUH6 204 aa12.47□□□□□ -0.41
THBS3-207ENST00000486260 TMA7Q9Y2S6 64 aaKnown RBP12.47□□□□□ -0.41
THBS3-207ENST00000486260 CMYA5Q8N3K9 4069 aa12.47□□□□□ -0.41
THBS3-207ENST00000486260 CXorf1O96002 111 aa12.46□□□□□ -0.41
THBS3-207ENST00000486260 GALR1P47211 349 aa12.46□□□□□ -0.41
THBS3-207ENST00000486260 CD300EQ496F6 205 aaPredicted RBP12.46□□□□□ -0.41
THBS3-207ENST00000486260 PQLC2Q6ZP29 291 aa12.46□□□□□ -0.41
THBS3-207ENST00000486260 STXBP6Q8NFX7 210 aa12.46□□□□□ -0.41
THBS3-207ENST00000486260 TMEM14CQ9P0S9 112 aa12.46□□□□□ -0.41
THBS3-207ENST00000486260 HELTA6NFD8 242 aa12.46□□□□□ -0.42
THBS3-207ENST00000486260 ZNF785A8K8V0 405 aa12.46□□□□□ -0.42
THBS3-207ENST00000486260 H3BQ15 152 aa12.46□□□□□ -0.42
THBS3-207ENST00000486260 H3BTX0 84 aa12.46□□□□□ -0.42
THBS3-207ENST00000486260 IGLL1P15814 213 aa12.46□□□□□ -0.42
THBS3-207ENST00000486260 C9orf66Q5T8R8 295 aa12.46□□□□□ -0.42
THBS3-207ENST00000486260 IQCF2Q8IXL9 164 aa12.46□□□□□ -0.42
THBS3-207ENST00000486260 FXYD5Q96DB9 178 aa12.46□□□□□ -0.42
THBS3-207ENST00000486260 SAT2Q96F10 170 aaPredicted RBP12.46□□□□□ -0.42
THBS3-207ENST00000486260 C17orf77Q96MU5 243 aa12.46□□□□□ -0.42
THBS3-207ENST00000486260 TMPRSS5Q9H3S3 457 aa12.46□□□□□ -0.42
THBS3-207ENST00000486260 IGLV1-51P01701 117 aa12.45□□□□□ -0.42
THBS3-207ENST00000486260 IGLC2P0DOY2 106 aa12.45□□□□□ -0.42
THBS3-207ENST00000486260 ATF4P18848 351 aaPredicted RBP12.45□□□□□ -0.42
THBS3-207ENST00000486260 GCHFRP30047 84 aa12.45□□□□□ -0.42
THBS3-207ENST00000486260 BLOC1S1P78537 153 aa12.45□□□□□ -0.42
THBS3-207ENST00000486260 TMEM61Q8N0U2 210 aa12.45□□□□□ -0.42
THBS3-207ENST00000486260 GBGT1Q8N5D6 347 aa12.45□□□□□ -0.42
THBS3-207ENST00000486260 CITED4Q96RK1 184 aa12.45□□□□□ -0.42
THBS3-207ENST00000486260 MCRIP2Q9BUT9 160 aaKnown RBP12.45□□□□□ -0.42
THBS3-207ENST00000486260 IZUMO1RA6ND01 250 aa12.44□□□□□ -0.42
THBS3-207ENST00000486260 HIST1H1EP10412 219 aaKnown RBP12.44□□□□□ -0.42
THBS3-207ENST00000486260 UBE2L3P68036 154 aaKnown RBP12.44□□□□□ -0.42
THBS3-207ENST00000486260 RBPMS2Q6ZRY4 209 aaKnown RBP12.44□□□□□ -0.42
THBS3-207ENST00000486260 LRRC20Q8TCA0 184 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms