RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 CDX1P47902 265 aaPredicted RBP11.05□□□□□ -0.64
COL9A1-207ENST00000486080 MEF2BQ02080 365 aaPredicted RBP11.05□□□□□ -0.64
COL9A1-207ENST00000486080 DEFB136Q30KP8 78 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 STXBP6Q8NFX7 210 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 RNF114Q9Y508 228 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 IGHV4OR15-8A0A075B7B6 117 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 A0A087WW49 117 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 ZNF320A2RRD8 509 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 C11orf94C9JXX5 98 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 H3BQ15 152 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 OR4F5Q8NH21 305 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 BLNKQ8WV28 456 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 OR4F4Q96R69 305 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 METTL26Q96S19 204 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 SLC35B3Q9H1N7 401 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 TMEM14CQ9P0S9 112 aa11.05□□□□□ -0.64
COL9A1-207ENST00000486080 MRPS12O15235 138 aaKnown RBP11.04□□□□□ -0.64
COL9A1-207ENST00000486080 CRYBB3P26998 211 aa11.04□□□□□ -0.64
COL9A1-207ENST00000486080 CEBPGP53567 150 aa11.04□□□□□ -0.64
COL9A1-207ENST00000486080 S100A7AQ86SG5 101 aa11.04□□□□□ -0.64
COL9A1-207ENST00000486080 BPIFA4PQ86YQ2 179 aa11.04□□□□□ -0.64
COL9A1-207ENST00000486080 CYB561D1Q8N8Q1 229 aa11.04□□□□□ -0.64
COL9A1-207ENST00000486080 TMEM190Q8WZ59 177 aa11.04□□□□□ -0.64
COL9A1-207ENST00000486080 SMDT1Q9H4I9 107 aa11.04□□□□□ -0.64
COL9A1-207ENST00000486080 KRBOX1C9JBD0 128 aa11.03□□□□□ -0.64
COL9A1-207ENST00000486080 BUB3O43684 328 aa11.03□□□□□ -0.64
COL9A1-207ENST00000486080 NBEAP1P0C6P0 100 aa11.03□□□□□ -0.64
COL9A1-207ENST00000486080 ZP3P21754 424 aa11.03□□□□□ -0.64
COL9A1-207ENST00000486080 NPPCP23582 126 aa11.03□□□□□ -0.64
COL9A1-207ENST00000486080 PROK1P58294 105 aa11.03□□□□□ -0.64
COL9A1-207ENST00000486080 RPEL1Q2QD12 228 aa11.03□□□□□ -0.64
COL9A1-207ENST00000486080 GPHB5Q86YW7 130 aa11.03□□□□□ -0.64
COL9A1-207ENST00000486080 C4orf3Q8WVX3 66 aa11.03□□□□□ -0.64
COL9A1-207ENST00000486080 C17orf77Q96MU5 243 aa11.03□□□□□ -0.64
COL9A1-207ENST00000486080 ZNF586Q9NXT0 402 aa11.03□□□□□ -0.64
COL9A1-207ENST00000486080 U3KQE9 123 aa11.03□□□□□ -0.64
COL9A1-207ENST00000486080 F8W036 122 aa11.02□□□□□ -0.64
COL9A1-207ENST00000486080 TAGLN2P37802 199 aaKnown RBP11.02□□□□□ -0.64
COL9A1-207ENST00000486080 TM4SF20Q53R12 229 aa11.02□□□□□ -0.64
COL9A1-207ENST00000486080 OR8I2Q8N0Y5 310 aa11.02□□□□□ -0.64
COL9A1-207ENST00000486080 KLHL30-AS1Q8NEE0 82 aa11.02□□□□□ -0.64
COL9A1-207ENST00000486080 A0A1W2PRX2 142 aa11.02□□□□□ -0.65
COL9A1-207ENST00000486080 GGTLC3B5MD39 225 aa11.02□□□□□ -0.65
COL9A1-207ENST00000486080 IGLC2P0DOY2 106 aa11.02□□□□□ -0.65
COL9A1-207ENST00000486080 HIST1H1EP10412 219 aaKnown RBP11.02□□□□□ -0.65
COL9A1-207ENST00000486080 EDN2P20800 178 aa11.02□□□□□ -0.65
COL9A1-207ENST00000486080 HOXD3P31249 432 aaPredicted RBP11.02□□□□□ -0.65
COL9A1-207ENST00000486080 FAM106AQ4KMX7 169 aa11.02□□□□□ -0.65
COL9A1-207ENST00000486080 DUX3Q96PT4 197 aa11.02□□□□□ -0.65
COL9A1-207ENST00000486080 CITED2Q99967 270 aaPredicted RBP11.02□□□□□ -0.65
COL9A1-207ENST00000486080 SMAD5-AS1Q9Y6J3 95 aa11.02□□□□□ -0.65
COL9A1-207ENST00000486080 A0A1W2PRE2 83 aa11.01□□□□□ -0.65
COL9A1-207ENST00000486080 RANP62826 216 aaKnown RBP11.01□□□□□ -0.65
COL9A1-207ENST00000486080 SUMO1P63165 101 aaKnown RBP11.01□□□□□ -0.65
COL9A1-207ENST00000486080 C10orf91Q5T1B1 145 aa11.01□□□□□ -0.65
COL9A1-207ENST00000486080 C8orf86Q6ZUL3 223 aa11.01□□□□□ -0.65
COL9A1-207ENST00000486080 LURAP1LQ8IV03 231 aa11.01□□□□□ -0.65
COL9A1-207ENST00000486080 OR11H1Q8NG94 326 aa11.01□□□□□ -0.65
COL9A1-207ENST00000486080 OR4F17Q8NGA8 305 aa11.01□□□□□ -0.65
COL9A1-207ENST00000486080 NDUFB4O95168 129 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 SLURP1P55000 103 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 SYNJ2BPP57105 145 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 SOHLH1Q5JUK2 328 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 FAM90A2PQ658T7 463 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 CCDC28AQ8IWP9 274 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 SEC11CQ9BY50 192 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 ARL2-SNX15V9GYD0 113 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 TRBV19A0A075B6N1 114 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 SCO2A0A1W2PP80 73 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 APOC3P02656 99 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 RPL7P18124 248 aaKnown RBP11□□□□□ -0.65
COL9A1-207ENST00000486080 S100A7P31151 101 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 KRTAP10-3P60369 221 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 OR1N2Q8NGR9 330 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 ELOVL1Q9BW60 279 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 DAZ1Q9NQZ3 744 aaKnown RBP11□□□□□ -0.65
COL9A1-207ENST00000486080 SELENOKQ9Y6D0 94 aa11□□□□□ -0.65
COL9A1-207ENST00000486080 LINC01619G3V211 115 aa10.99□□□□□ -0.65
COL9A1-207ENST00000486080 SLC17A3O00476 420 aa10.99□□□□□ -0.65
COL9A1-207ENST00000486080 PDE6DO43924 150 aa10.99□□□□□ -0.65
COL9A1-207ENST00000486080 GUCA2BQ16661 112 aa10.99□□□□□ -0.65
COL9A1-207ENST00000486080 C1orf194Q5T5A4 169 aa10.99□□□□□ -0.65
COL9A1-207ENST00000486080 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.99□□□□□ -0.65
COL9A1-207ENST00000486080 TXNDC17Q9BRA2 123 aa10.99□□□□□ -0.65
COL9A1-207ENST00000486080 TSSC4Q9Y5U2 329 aaPredicted RBP10.99□□□□□ -0.65
COL9A1-207ENST00000486080 IGHV7-4-1A0A0J9YVY3 117 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 TMEM250H0YL14 139 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 K7EMT4 169 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 MYCNOSP40205 109 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 KLF5Q13887 457 aaPredicted RBP10.98□□□□□ -0.65
COL9A1-207ENST00000486080 C16orf54Q6UWD8 224 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 EXOC3-AS1Q8N2X6 119 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 GLMPQ8WWB7 406 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 WFDC12Q8WWY7 111 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 RPUSD4Q96CM3 377 aaKnown RBP10.98□□□□□ -0.65
COL9A1-207ENST00000486080 RAX2Q96IS3 184 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 DERL1Q9BUN8 251 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 Q9H3A6 140 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 RNF24Q9Y225 148 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 CARHSP1Q9Y2V2 147 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms