RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 GCSAMLQ5JQS6 135 aa7.29□□□□□ -1.24
SND1-213ENST00000486037 AKR1C8PQ5T2L2 129 aa7.29□□□□□ -1.24
SND1-213ENST00000486037 Q6ZRG5 221 aa7.29□□□□□ -1.24
SND1-213ENST00000486037 SSX7Q7RTT5 188 aa7.29□□□□□ -1.24
SND1-213ENST00000486037 STPG3Q8N7X2 389 aa7.29□□□□□ -1.24
SND1-213ENST00000486037 NECAP1Q8NC96 275 aa7.29□□□□□ -1.24
SND1-213ENST00000486037 BPIFCQ8NFQ6 507 aa7.29□□□□□ -1.24
SND1-213ENST00000486037 FAM213BQ8TBF2 198 aa7.29□□□□□ -1.24
SND1-213ENST00000486037 LRRC20Q8TCA0 184 aa7.29□□□□□ -1.24
SND1-213ENST00000486037 VN1R17PQ8TDU5 208 aa7.29□□□□□ -1.24
SND1-213ENST00000486037 C21orf62Q9NYP8 219 aa7.29□□□□□ -1.24
SND1-213ENST00000486037 THYN1Q9P016 225 aa7.29□□□□□ -1.24
SND1-213ENST00000486037 ANKRD34BA5PLL1 514 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 PRSS29PA6NIE9 313 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 ZFP92A6NM28 416 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 OR11H12B2RN74 326 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 H3BUA1 57 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 EIF3GO75821 320 aaKnown RBP eCLIP7.28□□□□□ -1.24
SND1-213ENST00000486037 IGKV1-17P01599 117 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 TRGV3P03979 118 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 EDN2P20800 178 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 RAB5CP51148 216 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 C15orf32Q32M92 178 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 PXDC1Q5TGL8 231 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 ZNF502Q8TBZ5 544 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 SAT2Q96F10 170 aaPredicted RBP7.28□□□□□ -1.24
SND1-213ENST00000486037 ZNF414Q96IQ9 312 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 TRGV9Q99603 122 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 KCNIP2Q9NS61 270 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 SLC39A9Q9NUM3 307 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 SELENOKQ9Y6D0 94 aa7.28□□□□□ -1.24
SND1-213ENST00000486037 LINC00862A6NCI5 91 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 FAM223BA6NKX1 122 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 TEX46H3BTG2 121 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 TRBV12-3P01733 135 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 FCGR2BP31994 310 aaPredicted RBP7.27□□□□□ -1.25
SND1-213ENST00000486037 NPBWR1P48145 328 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 TPPP2P59282 170 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 B2MP61769 119 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 BLOC1S1P78537 153 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 ACOT6Q3I5F7 207 aaPredicted RBP7.27□□□□□ -1.25
SND1-213ENST00000486037 CD300EQ496F6 205 aaPredicted RBP7.27□□□□□ -1.25
SND1-213ENST00000486037 Q56UQ5 140 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 FAM122CQ6P4D5 195 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 SPSB3Q6PJ21 355 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 DPPA3Q6W0C5 159 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 FAM223AQ8IWN6 122 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 SLC7A5P1Q8MH63 180 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 MAPKAPK5-AS1Q8N8E1 139 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 OR10G4Q8NGN3 311 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 OR10G9Q8NGN4 311 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 OR10G7Q8NGN6 311 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 CCDC140Q96MF4 163 aa7.27□□□□□ -1.25
SND1-213ENST00000486037 DMBT1Q9UGM3 2413 aaPredicted RBP7.27□□□□□ -1.25
SND1-213ENST00000486037 OR2T8A6NH00 312 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 GNG7O60262 68 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 MBP02144 154 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 CTSGP08311 255 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 M6PRP20645 277 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 GPR183P32249 361 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 ADMP35318 185 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 SELENOTP62341 195 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 ATP5G2Q06055 141 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 SPATA31B1PQ5VZV4 182 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 PATE2Q6UY27 113 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 WFDC3Q8IUB2 231 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 LYPD6BQ8NI32 183 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 MBD3L1Q8WWY6 194 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 EEF1AKMT3Q96AZ1 226 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 TXN2Q99757 166 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 CHRDL1Q9BU40 450 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 SLC25A22Q9H936 323 aa7.26□□□□□ -1.25
SND1-213ENST00000486037 TRAV30A0A087WSZ9 112 aa7.25□□□□□ -1.25
SND1-213ENST00000486037 CTXND1A0A1B0GTU2 59 aa7.25□□□□□ -1.25
SND1-213ENST00000486037 A0A1B0GV50 99 aa7.25□□□□□ -1.25
SND1-213ENST00000486037 TOMM40O96008 361 aa7.25□□□□□ -1.25
SND1-213ENST00000486037 H2AFB1P0C5Y9 115 aa7.25□□□□□ -1.25
SND1-213ENST00000486037 PSG1P11464 419 aa7.25□□□□□ -1.25
SND1-213ENST00000486037 ZP3P21754 424 aa7.25□□□□□ -1.25
SND1-213ENST00000486037 CCL20P78556 96 aa7.25□□□□□ -1.25
SND1-213ENST00000486037 LCN15Q6UWW0 184 aa7.25□□□□□ -1.25
SND1-213ENST00000486037 CLEC19AQ6UXS0 136 aa7.25□□□□□ -1.25
SND1-213ENST00000486037 TMEM37Q8WXS4 190 aa7.25□□□□□ -1.25
SND1-213ENST00000486037 ACTR3CQ9C0K3 210 aaPredicted RBP7.25□□□□□ -1.25
SND1-213ENST00000486037 HRH4Q9H3N8 390 aa7.25□□□□□ -1.25
SND1-213ENST00000486037 MED9Q9NWA0 146 aa7.25□□□□□ -1.25
SND1-213ENST00000486037 DOK5Q9P104 306 aa7.25□□□□□ -1.25
SND1-213ENST00000486037 HMCN2Q8NDA2 5059 aa7.25□□□□□ -1.25
SND1-213ENST00000486037 TRBV7-1A0A0A6YYK4 115 aa7.24□□□□□ -1.25
SND1-213ENST00000486037 MAP1LC3B2A6NCE7 125 aa7.24□□□□□ -1.25
SND1-213ENST00000486037 HMGB3O15347 200 aaKnown RBP7.24□□□□□ -1.25
SND1-213ENST00000486037 TGOLN2O43493 480 aa7.24□□□□□ -1.25
SND1-213ENST00000486037 CLEC3BP05452 202 aa7.24□□□□□ -1.25
SND1-213ENST00000486037 OR5G3P0C626 314 aa7.24□□□□□ -1.25
SND1-213ENST00000486037 RD3LP0DJH9 198 aa7.24□□□□□ -1.25
SND1-213ENST00000486037 CDC34P49427 236 aaPredicted RBP7.24□□□□□ -1.25
SND1-213ENST00000486037 FGF8P55075 233 aaPredicted RBP7.24□□□□□ -1.25
SND1-213ENST00000486037 PLP1P60201 277 aa7.24□□□□□ -1.25
SND1-213ENST00000486037 NANOS2P60321 138 aaKnown RBP7.24□□□□□ -1.25
SND1-213ENST00000486037 YPEL3P61236 119 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms