RNA–Protein interactions for RNA: ENST00000485943.1

USP40-216, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-216ENST00000485943 LEMD1Q68G75 181 aa6.02□□□□□ -1.45
USP40-216ENST00000485943 C16orf54Q6UWD8 224 aa6.02□□□□□ -1.45
USP40-216ENST00000485943 ADAMTSL5Q6ZMM2 481 aa6.02□□□□□ -1.45
USP40-216ENST00000485943 APRG1Q8IVJ8 170 aa6.02□□□□□ -1.45
USP40-216ENST00000485943 OR5C1Q8NGR4 320 aa6.02□□□□□ -1.45
USP40-216ENST00000485943 WFDC10AQ9H1F0 79 aa6.02□□□□□ -1.45
USP40-216ENST00000485943 SLC45A2Q9UMX9 530 aa6.02□□□□□ -1.45
USP40-216ENST00000485943 FXYD6-FXYD2A0A087WZ82 144 aa6.01□□□□□ -1.45
USP40-216ENST00000485943 A8MZ25 164 aa6.01□□□□□ -1.45
USP40-216ENST00000485943 UBE2CO00762 179 aa6.01□□□□□ -1.45
USP40-216ENST00000485943 CCNKO75909 580 aa6.01□□□□□ -1.45
USP40-216ENST00000485943 RPL12P30050 165 aaKnown RBP6.01□□□□□ -1.45
USP40-216ENST00000485943 B2MP61769 119 aa6.01□□□□□ -1.45
USP40-216ENST00000485943 EWSR1Q01844 656 aaKnown RBP eCLIP6.01□□□□□ -1.45
USP40-216ENST00000485943 HAGHQ16775 308 aa6.01□□□□□ -1.45
USP40-216ENST00000485943 ACTL10Q5JWF8 245 aa6.01□□□□□ -1.45
USP40-216ENST00000485943 BPIFA4PQ86YQ2 179 aa6.01□□□□□ -1.45
USP40-216ENST00000485943 SBSPONQ8IVN8 264 aa6.01□□□□□ -1.45
USP40-216ENST00000485943 FAM110AQ9BQ89 295 aa6.01□□□□□ -1.45
USP40-216ENST00000485943 RSG1Q9BU20 258 aa6.01□□□□□ -1.45
USP40-216ENST00000485943 SMIM3Q9BZL3 60 aa6.01□□□□□ -1.45
USP40-216ENST00000485943 ARV1Q9H2C2 271 aa6.01□□□□□ -1.45
USP40-216ENST00000485943 MAP6D1Q9H9H5 199 aa6.01□□□□□ -1.45
USP40-216ENST00000485943 RPRMQ9NS64 109 aa6.01□□□□□ -1.45
USP40-216ENST00000485943 CMYA5Q8N3K9 4069 aa6□□□□□ -1.45
USP40-216ENST00000485943 IGSF23A1L1A6 192 aa6□□□□□ -1.45
USP40-216ENST00000485943 ZNF98A6NK75 572 aa6□□□□□ -1.45
USP40-216ENST00000485943 BUB3O43684 328 aa6□□□□□ -1.45
USP40-216ENST00000485943 MPC2O95563 127 aa6□□□□□ -1.45
USP40-216ENST00000485943 CA1P00915 261 aaPredicted RBP6□□□□□ -1.45
USP40-216ENST00000485943 PAX9P55771 341 aa6□□□□□ -1.45
USP40-216ENST00000485943 ZNF266Q14584 549 aa6□□□□□ -1.45
USP40-216ENST00000485943 LINC00305Q7Z4B0 112 aa6□□□□□ -1.45
USP40-216ENST00000485943 ZNF738Q8NE65 137 aa6□□□□□ -1.45
USP40-216ENST00000485943 OR4B1Q8NGF8 309 aa6□□□□□ -1.45
USP40-216ENST00000485943 IL17DQ8TAD2 202 aa6□□□□□ -1.45
USP40-216ENST00000485943 ASB13Q8WXK3 278 aa6□□□□□ -1.45
USP40-216ENST00000485943 WWC2-AS2Q96NR7 200 aa6□□□□□ -1.45
USP40-216ENST00000485943 C1QTNF4Q9BXJ3 329 aa6□□□□□ -1.45
USP40-216ENST00000485943 SLC25A39Q9BZJ4 359 aaPredicted RBP6□□□□□ -1.45
USP40-216ENST00000485943 CSTL1Q9H114 145 aa6□□□□□ -1.45
USP40-216ENST00000485943 OR5AC2Q9NZP5 309 aa6□□□□□ -1.45
USP40-216ENST00000485943 MBD2Q9UBB5 411 aa6□□□□□ -1.45
USP40-216ENST00000485943 IGKV1D-37A0A075B6S9 117 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 BORCS7-ASMTA0A0B4J1R7 106 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 A0A1W2PPV4 95 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 SPRY2O43597 315 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 PSMB3P49720 205 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 RHOBP62745 196 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 NHLH2Q02577 135 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 FCN2Q15485 313 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 DEFB135Q30KP9 77 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 TMEM41BQ5BJD5 291 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 XP32Q5T750 250 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 MIC13Q5XKP0 118 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 MORN3Q6PF18 240 aaPredicted RBP5.99□□□□□ -1.45
USP40-216ENST00000485943 NUDT10Q8NFP7 164 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 GLMPQ8WWB7 406 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 NUDT11Q96G61 164 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 ZNF414Q96IQ9 312 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 UHRF2Q96PU4 802 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 ATP5SQ99766 215 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 TMEM208Q9BTX3 173 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 AAMDCQ9H7C9 122 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 DNAJC4Q9NNZ3 241 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 TIMM9Q9Y5J7 89 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 PXMP4Q9Y6I8 212 aa5.99□□□□□ -1.45
USP40-216ENST00000485943 IGKV1OR2-108A0A075B7D4 117 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 KIR2DL5BA0A0G2JN68 375 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 KIR2DL5BA0A0G2JPC4 375 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 KNCNA6PVL3 124 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 PRSS46E5RG02 174 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 H3BRN7 92 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 K7EQG2 157 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 ISLRO14498 428 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 DUSP14O95147 198 aaKnown RBP5.98□□□□□ -1.45
USP40-216ENST00000485943 IGKV3-20P01619 116 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 GIPP09681 153 aaPredicted RBP5.98□□□□□ -1.45
USP40-216ENST00000485943 SPP1P10451 314 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 H2BFSP57053 126 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 TAS2R45P59539 299 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 ODF3L2Q3SX64 289 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 FAM90A2PQ658T7 463 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 LCN15Q6UWW0 184 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 KIR2DL5AQ8N109 375 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 OR2T35Q8NGX2 323 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 KIR2DL5BQ8NHK3 375 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 GATAD1Q8WUU5 269 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 MGST2Q99735 147 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 SHANK2-AS3Q9BTD1 123 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 SCRT1Q9BWW7 348 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 SLC25A32Q9H2D1 315 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 SLC39A9Q9NUM3 307 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 WDR83OSQ9Y284 106 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 HSPB11Q9Y547 144 aa5.98□□□□□ -1.45
USP40-216ENST00000485943 RBMY1BA6NDE4 496 aaKnown RBP5.97□□□□□ -1.45
USP40-216ENST00000485943 RBMY1EA6NEQ0 496 aaKnown RBP5.97□□□□□ -1.45
USP40-216ENST00000485943 PMS2P5A8MQ11 134 aa5.97□□□□□ -1.45
USP40-216ENST00000485943 OR7C2O60412 319 aa5.97□□□□□ -1.45
USP40-216ENST00000485943 RBMY1DP0C7P1 496 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms