RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 MS4A6AQ9H2W1 248 aa6.64□□□□□ -1.35
COL8A1-207ENST00000483969 C11orf1Q9H5F2 150 aa6.64□□□□□ -1.35
COL8A1-207ENST00000483969 FBXL17Q9UF56 701 aa6.64□□□□□ -1.35
COL8A1-207ENST00000483969 SLC45A2Q9UMX9 530 aa6.64□□□□□ -1.35
COL8A1-207ENST00000483969 ALG5Q9Y673 324 aa6.64□□□□□ -1.35
COL8A1-207ENST00000483969 ORM2P19652 201 aa6.63□□□□□ -1.35
COL8A1-207ENST00000483969 H2BFSP57053 126 aa6.63□□□□□ -1.35
COL8A1-207ENST00000483969 ARL16Q0P5N6 197 aa6.63□□□□□ -1.35
COL8A1-207ENST00000483969 LRRC37A5PQ49AS3 106 aa6.63□□□□□ -1.35
COL8A1-207ENST00000483969 PXDC1Q5TGL8 231 aa6.63□□□□□ -1.35
COL8A1-207ENST00000483969 SBSPONQ8IVN8 264 aa6.63□□□□□ -1.35
COL8A1-207ENST00000483969 TMEM217Q8N7C4 229 aa6.63□□□□□ -1.35
COL8A1-207ENST00000483969 PPP1R1CQ8WVI7 109 aa6.63□□□□□ -1.35
COL8A1-207ENST00000483969 LINC00476Q8WZB0 136 aa6.63□□□□□ -1.35
COL8A1-207ENST00000483969 TMEM147Q9BVK8 224 aa6.63□□□□□ -1.35
COL8A1-207ENST00000483969 SRD5A3Q9H8P0 318 aa6.63□□□□□ -1.35
COL8A1-207ENST00000483969 UQCC1Q9NVA1 299 aa6.63□□□□□ -1.35
COL8A1-207ENST00000483969 RNF24Q9Y225 148 aa6.63□□□□□ -1.35
COL8A1-207ENST00000483969 LOC102724200A0A096LPH7 203 aaPredicted RBP6.62□□□□□ -1.35
COL8A1-207ENST00000483969 B5MCH6 92 aa6.62□□□□□ -1.35
COL8A1-207ENST00000483969 HYPMO75409 117 aa6.62□□□□□ -1.35
COL8A1-207ENST00000483969 MPC2O95563 127 aa6.62□□□□□ -1.35
COL8A1-207ENST00000483969 GATA2P23769 480 aaPredicted RBP6.62□□□□□ -1.35
COL8A1-207ENST00000483969 PLP1P60201 277 aa6.62□□□□□ -1.35
COL8A1-207ENST00000483969 RAP2BP61225 183 aa6.62□□□□□ -1.35
COL8A1-207ENST00000483969 SIGLEC15Q6ZMC9 328 aa6.62□□□□□ -1.35
COL8A1-207ENST00000483969 LINC00322Q6ZN03 302 aaPredicted RBP6.62□□□□□ -1.35
COL8A1-207ENST00000483969 ZNF546Q86UE3 836 aa6.62□□□□□ -1.35
COL8A1-207ENST00000483969 OR8I2Q8N0Y5 310 aa6.62□□□□□ -1.35
COL8A1-207ENST00000483969 STXBP6Q8NFX7 210 aa6.62□□□□□ -1.35
COL8A1-207ENST00000483969 OR1B1Q8NGR6 318 aa6.62□□□□□ -1.35
COL8A1-207ENST00000483969 GLMPQ8WWB7 406 aa6.62□□□□□ -1.35
COL8A1-207ENST00000483969 OR5AC2Q9NZP5 309 aa6.62□□□□□ -1.35
COL8A1-207ENST00000483969 UBQLN2Q9UHD9 624 aa6.62□□□□□ -1.35
COL8A1-207ENST00000483969 IGSF23A1L1A6 192 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 RBMY1BA6NDE4 496 aaKnown RBP6.61□□□□□ -1.35
COL8A1-207ENST00000483969 RBMY1EA6NEQ0 496 aaKnown RBP6.61□□□□□ -1.35
COL8A1-207ENST00000483969 ZNF98A6NK75 572 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 H0YIZ8 118 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 K7EQG2 157 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 AGPAT2O15120 278 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 OR5G3P0C626 314 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 RBMY1DP0C7P1 496 aaKnown RBP6.61□□□□□ -1.35
COL8A1-207ENST00000483969 CAMLGP49069 296 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 PTTG1IPP53801 180 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 EWSR1Q01844 656 aaKnown RBP eCLIP6.61□□□□□ -1.35
COL8A1-207ENST00000483969 NHLH2Q02577 135 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 BAXQ07812 192 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 FGL1Q08830 312 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 OXA1LQ15070 435 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 HAGHQ16775 308 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 VWC2Q2TAL6 325 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 TMEM182Q6ZP80 229 aaPredicted RBP6.61□□□□□ -1.35
COL8A1-207ENST00000483969 Q6ZRG5 221 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 THAP6Q8TBB0 222 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 ASB13Q8WXK3 278 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 GPR82Q96P67 336 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 RNF126Q9BV68 326 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 GGTLC1Q9BX51 225 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 SEPSECSQ9HD40 501 aaKnown RBP6.61□□□□□ -1.35
COL8A1-207ENST00000483969 DKK2Q9UBU2 259 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 HIGD1AQ9Y241 93 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 WDR83OSQ9Y284 106 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 U3KQK5 164 aa6.61□□□□□ -1.35
COL8A1-207ENST00000483969 NOTCH3Q9UM47 2321 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 NOTCH1P46531 2555 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 MPDU1O75352 247 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 LINC00869P0C866 280 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 ID1P41134 155 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 GALR1P47211 349 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 APOC4P55056 127 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 DEFB131AP59861 70 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 SNRPD3P62318 126 aaKnown RBP6.6□□□□□ -1.35
COL8A1-207ENST00000483969 FCN2Q15485 313 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 ODF3L2Q3SX64 289 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 SAMD13Q5VXD3 122 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 APRG1Q8IVJ8 170 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 OR1L4Q8NGR5 311 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 CHAC2Q8WUX2 184 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 MGST2Q99735 147 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 TM2D3Q9BRN9 247 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 ARL6Q9H0F7 186 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 WFDC10AQ9H1F0 79 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 MAP6D1Q9H9H5 199 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 NRN1Q9NPD7 142 aa6.6□□□□□ -1.35
COL8A1-207ENST00000483969 KIR2DL5BA0A0G2JN68 375 aa6.59□□□□□ -1.35
COL8A1-207ENST00000483969 KIR2DL5BA0A0G2JPC4 375 aa6.59□□□□□ -1.35
COL8A1-207ENST00000483969 UBE2CO00762 179 aa6.59□□□□□ -1.35
COL8A1-207ENST00000483969 COX7A2P2O60397 106 aa6.59□□□□□ -1.35
COL8A1-207ENST00000483969 RPL7P18124 248 aaKnown RBP6.59□□□□□ -1.35
COL8A1-207ENST00000483969 CXCL3P19876 107 aa6.59□□□□□ -1.35
COL8A1-207ENST00000483969 RPL12P30050 165 aaKnown RBP6.59□□□□□ -1.35
COL8A1-207ENST00000483969 RPL29P47914 159 aaKnown RBP6.59□□□□□ -1.35
COL8A1-207ENST00000483969 MEOX2P50222 304 aa6.59□□□□□ -1.35
COL8A1-207ENST00000483969 KIR2DL5AQ8N109 375 aa6.59□□□□□ -1.35
COL8A1-207ENST00000483969 ZNF709Q8N972 641 aa6.59□□□□□ -1.35
COL8A1-207ENST00000483969 OR5C1Q8NGR4 320 aa6.59□□□□□ -1.35
COL8A1-207ENST00000483969 KIR2DL5BQ8NHK3 375 aa6.59□□□□□ -1.35
COL8A1-207ENST00000483969 DCANP1Q8TF63 244 aa6.59□□□□□ -1.35
COL8A1-207ENST00000483969 SHANK2-AS3Q9BTD1 123 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms