RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 UNQ5815/PRO19632Q6UWF5 114 aa6.91□□□□□ -1.3
CDC42SE1-204ENST00000483763 Q6ZS46 218 aa6.91□□□□□ -1.3
CDC42SE1-204ENST00000483763 C16orf82Q7Z2V1 217 aa6.91□□□□□ -1.3
CDC42SE1-204ENST00000483763 ZNF491Q8N8L2 437 aa6.91□□□□□ -1.3
CDC42SE1-204ENST00000483763 LINC01356Q8N9X3 169 aa6.91□□□□□ -1.3
CDC42SE1-204ENST00000483763 OR1L6Q8NGR2 347 aa6.91□□□□□ -1.3
CDC42SE1-204ENST00000483763 OCC1Q8TAD7 63 aa6.91□□□□□ -1.3
CDC42SE1-204ENST00000483763 C11orf52Q96A22 123 aa6.91□□□□□ -1.3
CDC42SE1-204ENST00000483763 TMEM242Q9NWH2 141 aa6.91□□□□□ -1.3
CDC42SE1-204ENST00000483763 A0A1W2PRE2 83 aa6.9□□□□□ -1.3
CDC42SE1-204ENST00000483763 OR2T8A6NH00 312 aa6.9□□□□□ -1.3
CDC42SE1-204ENST00000483763 H3BUX3 64 aa6.9□□□□□ -1.3
CDC42SE1-204ENST00000483763 K7EN84 100 aa6.9□□□□□ -1.3
CDC42SE1-204ENST00000483763 TGFAP01135 160 aa6.9□□□□□ -1.3
CDC42SE1-204ENST00000483763 GP9P14770 177 aa6.9□□□□□ -1.3
CDC42SE1-204ENST00000483763 CDX1P47902 265 aaPredicted RBP6.9□□□□□ -1.3
CDC42SE1-204ENST00000483763 CIARTQ8N365 385 aaPredicted RBP6.9□□□□□ -1.3
CDC42SE1-204ENST00000483763 NECAP1Q8NC96 275 aa6.9□□□□□ -1.3
CDC42SE1-204ENST00000483763 ZNF414Q96IQ9 312 aa6.9□□□□□ -1.3
CDC42SE1-204ENST00000483763 RNF2Q99496 336 aa6.9□□□□□ -1.3
CDC42SE1-204ENST00000483763 SLC25A39Q9BZJ4 359 aaPredicted RBP6.9□□□□□ -1.3
CDC42SE1-204ENST00000483763 C21orf62Q9NYP8 219 aa6.9□□□□□ -1.3
CDC42SE1-204ENST00000483763 MRPL27Q9P0M9 148 aaKnown RBP6.9□□□□□ -1.3
CDC42SE1-204ENST00000483763 IGHV3-35A0A0C4DH35 117 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 A4D1N5 150 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 CXorf65A6NEN9 183 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 CLDN34H7C241 214 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 GNG7O60262 68 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 IL4P05112 153 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 CTSGP08311 255 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 HIST1H1BP16401 226 aaKnown RBP6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 ADMP35318 185 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 RANP62826 216 aaKnown RBP6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 BLCAPP62952 87 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 LOXL1Q08397 574 aaPredicted RBP6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 USF2Q15853 346 aaPredicted RBP6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 C15orf32Q32M92 178 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 KRTAP1-3Q8IUG1 177 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 RNF152Q8N8N0 203 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 BLNKQ8WV28 456 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 CHRDL1Q9BU40 450 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 CLEC5AQ9NY25 188 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 FBXL7Q9UJT9 491 aa6.9□□□□□ -1.31
CDC42SE1-204ENST00000483763 IGHV3OR16-8A0A075B7F1 116 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 MYCNOSP40205 109 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 CDPF1Q6NVV7 123 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 MBD6Q96DN6 1003 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 MS4A10Q96PG2 267 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 HIGD1AQ9Y241 93 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 ARL2-SNX15V9GYD0 113 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 TRBV9A0A0B4J1U6 114 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 DLEU1O43261 78 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 TOMM40O96008 361 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 PFN1P07737 140 aaKnown RBP6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 PRB4P10163 310 aaPredicted RBP6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 ZNF25P17030 456 aaPredicted RBP6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 MFAP4P55083 255 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 GNG5P63218 68 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 RHOGP84095 191 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 Q56UQ5 140 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 FAM110DQ8TAY7 271 aaPredicted RBP6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 RNF125Q96EQ8 232 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 C17orf77Q96MU5 243 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 MOB4Q9Y3A3 225 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 CR1P17927 2039 aa6.89□□□□□ -1.31
CDC42SE1-204ENST00000483763 WI2-2373I1.2A0A1W2PRP0 233 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 HELTA6NFD8 242 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 M0QZK8 103 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 NBEAP1P0C6P0 100 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 OR5I1Q13606 314 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 ZNF329Q86UD4 541 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 ZNF48Q96MX3 618 aaPredicted RBP6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 TMEM160Q9NX00 188 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 THYN1Q9P016 225 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 TRAV34A0A0B4J273 112 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 A6NDX4 124 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 IGLV2-8P01709 118 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 CLEC3BP05452 202 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 IGHV4-31P0DP07 118 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 GATA3P23771 443 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 DDTP30046 118 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 RPS10P46783 165 aaKnown RBP6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 YPEL3P61236 119 aaPredicted RBP6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 C19orf54Q5BKX5 351 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 CENPWQ5EE01 88 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 PRSS57Q6UWY2 283 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 SFRP2Q96HF1 295 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 SGK494Q96LW2 274 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 CCDC140Q96MF4 163 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 NOL4LQ96MY1 436 aaPredicted RBP6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 CTDSP1Q9GZU7 261 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 ZNF586Q9NXT0 402 aa6.88□□□□□ -1.31
CDC42SE1-204ENST00000483763 JMJD1CQ15652 2540 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 H7BYZ3 331 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 GPR183P32249 361 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 FAM3BP58499 235 aaPredicted RBP6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 KLK9Q2XQG4 91 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 DEFB112Q30KQ8 113 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 TEX38Q6PEX7 206 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 NHLRC2Q8NBF2 726 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms