RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 UBE2L3P68036 154 aaKnown RBP7.74□□□□□ -1.17
HDAC6-226ENST00000483656 MEF2BQ02080 365 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-226ENST00000483656 FAM209BQ5JX69 171 aa7.74□□□□□ -1.17
HDAC6-226ENST00000483656 NARS2Q96I59 477 aaKnown RBP7.74□□□□□ -1.17
HDAC6-226ENST00000483656 C17orf77Q96MU5 243 aa7.74□□□□□ -1.17
HDAC6-226ENST00000483656 SLC35B3Q9H1N7 401 aa7.74□□□□□ -1.17
HDAC6-226ENST00000483656 IGHV4OR15-8A0A075B7B6 117 aa7.73□□□□□ -1.17
HDAC6-226ENST00000483656 A0A087WW49 117 aa7.73□□□□□ -1.17
HDAC6-226ENST00000483656 C11orf94C9JXX5 98 aa7.73□□□□□ -1.17
HDAC6-226ENST00000483656 NDUFS6O75380 124 aaKnown RBP7.73□□□□□ -1.17
HDAC6-226ENST00000483656 IGLC2P0DOY2 106 aa7.73□□□□□ -1.17
HDAC6-226ENST00000483656 CRYBB3P26998 211 aa7.73□□□□□ -1.17
HDAC6-226ENST00000483656 TAGLN2P37802 199 aaKnown RBP7.73□□□□□ -1.17
HDAC6-226ENST00000483656 CDX1P47902 265 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-226ENST00000483656 FAM90A2PQ658T7 463 aa7.73□□□□□ -1.17
HDAC6-226ENST00000483656 CCDC28AQ8IWP9 274 aa7.73□□□□□ -1.17
HDAC6-226ENST00000483656 CYB561D1Q8N8Q1 229 aa7.73□□□□□ -1.17
HDAC6-226ENST00000483656 STXBP6Q8NFX7 210 aa7.73□□□□□ -1.17
HDAC6-226ENST00000483656 TMEM190Q8WZ59 177 aa7.73□□□□□ -1.17
HDAC6-226ENST00000483656 SEC11CQ9BY50 192 aa7.73□□□□□ -1.17
HDAC6-226ENST00000483656 ZNF586Q9NXT0 402 aa7.73□□□□□ -1.17
HDAC6-226ENST00000483656 CARHSP1Q9Y2V2 147 aaKnown RBP7.73□□□□□ -1.17
HDAC6-226ENST00000483656 SMAD5-AS1Q9Y6J3 95 aa7.73□□□□□ -1.17
HDAC6-226ENST00000483656 ARL2-SNX15V9GYD0 113 aa7.73□□□□□ -1.17
HDAC6-226ENST00000483656 IGHV3-49A0A0A0MS15 119 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 A0A1W2PRE2 83 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 GGTLC3B5MD39 225 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 F8W036 122 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 H3BTX0 84 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 BUB3O43684 328 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 NDUFB4O95168 129 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 NBEAP1P0C6P0 100 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 HIST1H1EP10412 219 aaKnown RBP7.72□□□□□ -1.17
HDAC6-226ENST00000483656 CD28P10747 220 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 MYCNOSP40205 109 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 PROK1P58294 105 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 GUCA2BQ16661 112 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 CST9LP1Q5W188 147 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 GPHB5Q86YW7 130 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 OR4F5Q8NH21 305 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 OR4F4Q96R69 305 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 C20orf24Q9BUV8 137 aa7.72□□□□□ -1.17
HDAC6-226ENST00000483656 IGHV3OR16-13A0A075B7E8 117 aa7.71□□□□□ -1.18
HDAC6-226ENST00000483656 IGHV3-74A0A0B4J1X5 117 aa7.71□□□□□ -1.18
HDAC6-226ENST00000483656 IGHV3-66A0A0C4DH42 116 aa7.71□□□□□ -1.18
HDAC6-226ENST00000483656 TMEM250H0YL14 139 aa7.71□□□□□ -1.18
HDAC6-226ENST00000483656 EDN2P20800 178 aa7.71□□□□□ -1.18
HDAC6-226ENST00000483656 S100A7AQ86SG5 101 aa7.71□□□□□ -1.18
HDAC6-226ENST00000483656 BPIFA4PQ86YQ2 179 aa7.71□□□□□ -1.18
HDAC6-226ENST00000483656 BLNKQ8WV28 456 aa7.71□□□□□ -1.18
HDAC6-226ENST00000483656 METTL26Q96S19 204 aa7.71□□□□□ -1.18
HDAC6-226ENST00000483656 TXNDC17Q9BRA2 123 aa7.71□□□□□ -1.18
HDAC6-226ENST00000483656 ELOVL1Q9BW60 279 aa7.71□□□□□ -1.18
HDAC6-226ENST00000483656 TRBV19A0A075B6N1 114 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 SCO2A0A1W2PP80 73 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 ZNF320A2RRD8 509 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 F6UZH7 168 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 K7EMT4 169 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 APOC3P02656 99 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 CEBPGP53567 150 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 KRTAP10-3P60369 221 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 RANP62826 216 aaKnown RBP7.7□□□□□ -1.18
HDAC6-226ENST00000483656 SUMO1P63165 101 aaKnown RBP7.7□□□□□ -1.18
HDAC6-226ENST00000483656 DEFB136Q30KP8 78 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 TM4SF20Q53R12 229 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 SOHLH1Q5JUK2 328 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 C1orf194Q5T5A4 169 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 ATRAIDQ6UW56 229 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 C16orf54Q6UWD8 224 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 C11orf44Q8N8P7 122 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 C4orf3Q8WVX3 66 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 WFDC12Q8WWY7 111 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 C11orf52Q96A22 123 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 RNF114Q9Y508 228 aa7.7□□□□□ -1.18
HDAC6-226ENST00000483656 IGHV7-4-1A0A0J9YVY3 117 aa7.69□□□□□ -1.18
HDAC6-226ENST00000483656 HAX1O00165 279 aa7.69□□□□□ -1.18
HDAC6-226ENST00000483656 SLC17A3O00476 420 aa7.69□□□□□ -1.18
HDAC6-226ENST00000483656 PDE6DO43924 150 aa7.69□□□□□ -1.18
HDAC6-226ENST00000483656 RPL7P18124 248 aaKnown RBP7.69□□□□□ -1.18
HDAC6-226ENST00000483656 HOXD3P31249 432 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-226ENST00000483656 KLF5Q13887 457 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-226ENST00000483656 RPEL1Q2QD12 228 aa7.69□□□□□ -1.18
HDAC6-226ENST00000483656 FAM106AQ4KMX7 169 aa7.69□□□□□ -1.18
HDAC6-226ENST00000483656 SIGLEC15Q6ZMC9 328 aa7.69□□□□□ -1.18
HDAC6-226ENST00000483656 REC114Q7Z4M0 266 aa7.69□□□□□ -1.18
HDAC6-226ENST00000483656 OR8I2Q8N0Y5 310 aa7.69□□□□□ -1.18
HDAC6-226ENST00000483656 OR4F17Q8NGA8 305 aa7.69□□□□□ -1.18
HDAC6-226ENST00000483656 GLMPQ8WWB7 406 aa7.69□□□□□ -1.18
HDAC6-226ENST00000483656 DUX3Q96PT4 197 aa7.69□□□□□ -1.18
HDAC6-226ENST00000483656 CITED2Q99967 270 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-226ENST00000483656 DERL1Q9BUN8 251 aa7.69□□□□□ -1.18
HDAC6-226ENST00000483656 Q9H3A6 140 aa7.69□□□□□ -1.18
HDAC6-226ENST00000483656 SMPXQ9UHP9 88 aa7.69□□□□□ -1.18
HDAC6-226ENST00000483656 A0A087X0K7 114 aa7.68□□□□□ -1.18
HDAC6-226ENST00000483656 TMEM213A2RRL7 107 aa7.68□□□□□ -1.18
HDAC6-226ENST00000483656 PGPA6NDG6 321 aa7.68□□□□□ -1.18
HDAC6-226ENST00000483656 ADARB2-AS1A8MUL3 147 aa7.68□□□□□ -1.18
HDAC6-226ENST00000483656 LGALS9O00182 355 aa7.68□□□□□ -1.18
HDAC6-226ENST00000483656 S100A7P31151 101 aa7.68□□□□□ -1.18
HDAC6-226ENST00000483656 SLURP1P55000 103 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms