RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 GCHFRP30047 84 aa6.28□□□□□ -1.4
USP4-210ENST00000483212 SMCPP49901 116 aaPredicted RBP6.28□□□□□ -1.4
USP4-210ENST00000483212 SLURP1P55000 103 aa6.28□□□□□ -1.4
USP4-210ENST00000483212 RPEL1Q2QD12 228 aa6.28□□□□□ -1.4
USP4-210ENST00000483212 KHDC3LQ587J8 217 aa6.28□□□□□ -1.4
USP4-210ENST00000483212 PQLC2Q6ZP29 291 aa6.28□□□□□ -1.4
USP4-210ENST00000483212 NDUFA11Q86Y39 141 aa6.28□□□□□ -1.4
USP4-210ENST00000483212 C1QL4Q86Z23 238 aa6.28□□□□□ -1.4
USP4-210ENST00000483212 OR11H1Q8NG94 326 aa6.28□□□□□ -1.4
USP4-210ENST00000483212 FXYD5Q96DB9 178 aa6.28□□□□□ -1.4
USP4-210ENST00000483212 TMPRSS5Q9H3S3 457 aa6.28□□□□□ -1.4
USP4-210ENST00000483212 TMEM14CQ9P0S9 112 aa6.28□□□□□ -1.4
USP4-210ENST00000483212 NUDT19A8MXV4 375 aa6.27□□□□□ -1.41
USP4-210ENST00000483212 IGLC2P0DOY2 106 aa6.27□□□□□ -1.41
USP4-210ENST00000483212 PYYP10082 97 aa6.27□□□□□ -1.41
USP4-210ENST00000483212 SYNJ2BPP57105 145 aa6.27□□□□□ -1.41
USP4-210ENST00000483212 TAS2R45P59539 299 aa6.27□□□□□ -1.41
USP4-210ENST00000483212 FAM106AQ4KMX7 169 aa6.27□□□□□ -1.41
USP4-210ENST00000483212 TM4SF20Q53R12 229 aa6.27□□□□□ -1.41
USP4-210ENST00000483212 C16orf54Q6UWD8 224 aa6.27□□□□□ -1.41
USP4-210ENST00000483212 IL34Q6ZMJ4 242 aa6.27□□□□□ -1.41
USP4-210ENST00000483212 ADAMTSL5Q6ZMM2 481 aa6.27□□□□□ -1.41
USP4-210ENST00000483212 GLMPQ8WWB7 406 aa6.27□□□□□ -1.41
USP4-210ENST00000483212 DLX4Q92988 240 aaPredicted RBP6.27□□□□□ -1.41
USP4-210ENST00000483212 METTL26Q96S19 204 aa6.27□□□□□ -1.41
USP4-210ENST00000483212 C20orf24Q9BUV8 137 aa6.27□□□□□ -1.41
USP4-210ENST00000483212 OR51M1Q9H341 326 aa6.27□□□□□ -1.41
USP4-210ENST00000483212 DAZ1Q9NQZ3 744 aaKnown RBP6.27□□□□□ -1.41
USP4-210ENST00000483212 SMAD5-AS1Q9Y6J3 95 aa6.27□□□□□ -1.41
USP4-210ENST00000483212 IGHV3-49A0A0A0MS15 119 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 IGHV7-4-1A0A0J9YVY3 117 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 ZNF320A2RRD8 509 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 CCL24O00175 119 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 OR10J4P0C629 311 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 NPPCP23582 126 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 MYCNOSP40205 109 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 PSMB3P49720 205 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 SRSF3P84103 164 aaKnown RBP6.26□□□□□ -1.41
USP4-210ENST00000483212 C1orf194Q5T5A4 169 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 COMMD7Q86VX2 200 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 EIF4E3Q8N5X7 224 aaKnown RBP6.26□□□□□ -1.41
USP4-210ENST00000483212 DPF1Q92782 380 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 MARC2Q969Z3 335 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 FAM210AQ96ND0 272 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 PAXXQ9BUH6 204 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 ZNF586Q9NXT0 402 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 SMPXQ9UHP9 88 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 UFC1Q9Y3C8 167 aa6.26□□□□□ -1.41
USP4-210ENST00000483212 IGHV3OR16-13A0A075B7E8 117 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 A0A087X0K7 114 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 IGHV3-74A0A0B4J1X5 117 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 IGHV3-66A0A0C4DH42 116 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 LOC102723971A0A1B0GUV8 181 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 RAB19A4D1S5 217 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 C2orf70A6NJV1 201 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 C9JQL5 133 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 H3BQ15 152 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 CHEK1O14757 476 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 OR7C2O60412 319 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 NDUFB4O95168 129 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 CD5P06127 495 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 HIST1H1EP10412 219 aaKnown RBP6.25□□□□□ -1.41
USP4-210ENST00000483212 BCL2P10415 239 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 UBE2L3P68036 154 aaKnown RBP6.25□□□□□ -1.41
USP4-210ENST00000483212 GUK1Q16774 197 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 NSUN5P1Q3KNT7 163 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 ZNF506Q5JVG8 444 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 S100A7AQ86SG5 101 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 BPIFA4PQ86YQ2 179 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 SLC7A5P1Q8MH63 180 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 STXBP6Q8NFX7 210 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 TMEM167BQ9NRX6 74 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 GNG13Q9P2W3 67 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 PFDN2Q9UHV9 154 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 YTHDF2Q9Y5A9 579 aaKnown RBP6.25□□□□□ -1.41
USP4-210ENST00000483212 ARL2-SNX15V9GYD0 113 aa6.25□□□□□ -1.41
USP4-210ENST00000483212 TRBV19A0A075B6N1 114 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 RBFOX3A6NFN3 312 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 FAM74A7A6NL05 159 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 GGTLC3B5MD39 225 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 SLC17A3O00476 420 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 PAGE4O60829 102 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 CSN3P07498 182 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 SNRPCP09234 159 aaKnown RBP6.24□□□□□ -1.41
USP4-210ENST00000483212 FOLR2P14207 255 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 RPL7P18124 248 aaKnown RBP6.24□□□□□ -1.41
USP4-210ENST00000483212 CBLN1P23435 193 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 S100A7P31151 101 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 PPT1P50897 306 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 ICAM4Q14773 271 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 NDUFA5Q16718 116 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 HAGHQ16775 308 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 TOR2AQ5JU69 321 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 FAM90A2PQ658T7 463 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 CCDC28AQ8IWP9 274 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 OR8I2Q8N0Y5 310 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 OR9G4Q8NGQ1 327 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 GPR82Q96P67 336 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 RARRES2Q99969 163 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms