RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 MEOX2P50222 304 aa11.56□□□□□ -0.56
CCM2-215ENST00000482714 SAMD13Q5VXD3 122 aa11.56□□□□□ -0.56
CCM2-215ENST00000482714 STXBP6Q8NFX7 210 aa11.56□□□□□ -0.56
CCM2-215ENST00000482714 SEPSECSQ9HD40 501 aaKnown RBP11.56□□□□□ -0.56
CCM2-215ENST00000482714 DOK5Q9P104 306 aa11.56□□□□□ -0.56
CCM2-215ENST00000482714 ZNF785A8K8V0 405 aa11.55□□□□□ -0.56
CCM2-215ENST00000482714 GALR1P47211 349 aa11.55□□□□□ -0.56
CCM2-215ENST00000482714 RHOBP62745 196 aa11.55□□□□□ -0.56
CCM2-215ENST00000482714 FAM78BQ5VT40 261 aa11.55□□□□□ -0.56
CCM2-215ENST00000482714 SIGLEC15Q6ZMC9 328 aa11.55□□□□□ -0.56
CCM2-215ENST00000482714 BPIFA4PQ86YQ2 179 aa11.55□□□□□ -0.56
CCM2-215ENST00000482714 TMEM61Q8N0U2 210 aa11.55□□□□□ -0.56
CCM2-215ENST00000482714 UHRF2Q96PU4 802 aa11.55□□□□□ -0.56
CCM2-215ENST00000482714 SLC25A32Q9H2D1 315 aa11.55□□□□□ -0.56
CCM2-215ENST00000482714 IGHV3-66A0A0C4DH42 116 aa11.54□□□□□ -0.56
CCM2-215ENST00000482714 UMAD1C9J7I0 102 aa11.54□□□□□ -0.56
CCM2-215ENST00000482714 G3V4G9 280 aa11.54□□□□□ -0.56
CCM2-215ENST00000482714 TAS2R45P59539 299 aa11.54□□□□□ -0.56
CCM2-215ENST00000482714 OR10G4Q8NGN3 311 aa11.54□□□□□ -0.56
CCM2-215ENST00000482714 OR10G9Q8NGN4 311 aa11.54□□□□□ -0.56
CCM2-215ENST00000482714 OR10G7Q8NGN6 311 aa11.54□□□□□ -0.56
CCM2-215ENST00000482714 FUT9Q9Y231 359 aa11.54□□□□□ -0.56
CCM2-215ENST00000482714 ZNF256Q9Y2P7 627 aaPredicted RBP11.54□□□□□ -0.56
CCM2-215ENST00000482714 A0A1W2PPV4 95 aa11.53□□□□□ -0.56
CCM2-215ENST00000482714 OR4C46A6NHA9 309 aa11.53□□□□□ -0.56
CCM2-215ENST00000482714 RPL11P62913 178 aaKnown RBP11.53□□□□□ -0.56
CCM2-215ENST00000482714 BEAN1Q3B7T3 259 aa11.53□□□□□ -0.56
CCM2-215ENST00000482714 FAM110AQ9BQ89 295 aa11.53□□□□□ -0.56
CCM2-215ENST00000482714 SLC25A22Q9H936 323 aa11.53□□□□□ -0.56
CCM2-215ENST00000482714 TMEM14CQ9P0S9 112 aa11.53□□□□□ -0.56
CCM2-215ENST00000482714 TMEM41BQ5BJD5 291 aa11.52□□□□□ -0.56
CCM2-215ENST00000482714 AKR1C8PQ5T2L2 129 aa11.52□□□□□ -0.56
CCM2-215ENST00000482714 SCRT1Q9BWW7 348 aa11.52□□□□□ -0.56
CCM2-215ENST00000482714 NRN1Q9NPD7 142 aa11.52□□□□□ -0.56
CCM2-215ENST00000482714 IZUMO1RA6ND01 250 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 DNASE2O00115 360 aaPredicted RBP11.51□□□□□ -0.57
CCM2-215ENST00000482714 GP9P14770 177 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 RAB5CP51148 216 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 GUCA2BQ16661 112 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 GUK1Q16774 197 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 GCSAMLQ5JQS6 135 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 RPP25LQ8N5L8 163 aaKnown RBP11.51□□□□□ -0.57
CCM2-215ENST00000482714 ACTR3CQ9C0K3 210 aaPredicted RBP11.51□□□□□ -0.57
CCM2-215ENST00000482714 SH3BGRL3Q9H299 93 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 MS4A6AQ9H2W1 248 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 RPRMQ9NS64 109 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 A0A087X0K7 114 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 MRPS12O15235 138 aaKnown RBP11.51□□□□□ -0.57
CCM2-215ENST00000482714 DPPA3Q6W0C5 159 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 PQLC2Q6ZP29 291 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 PHYHIPLQ96FC7 376 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 HRH4Q9H3N8 390 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 CLEC5AQ9NY25 188 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 RFNGQ9Y644 331 aa11.51□□□□□ -0.57
CCM2-215ENST00000482714 K7EQG2 157 aa11.5□□□□□ -0.57
CCM2-215ENST00000482714 HIST1H1EP10412 219 aaKnown RBP11.5□□□□□ -0.57
CCM2-215ENST00000482714 ATF4P18848 351 aaPredicted RBP11.5□□□□□ -0.57
CCM2-215ENST00000482714 LEMD1Q68G75 181 aa11.5□□□□□ -0.57
CCM2-215ENST00000482714 MIR17HGQ75NE6 70 aa11.5□□□□□ -0.57
CCM2-215ENST00000482714 GTSCR1Q86UQ5 136 aa11.5□□□□□ -0.57
CCM2-215ENST00000482714 DCANP1Q8TF63 244 aa11.5□□□□□ -0.57
CCM2-215ENST00000482714 FAM167A-AS1Q96KT0 104 aa11.5□□□□□ -0.57
CCM2-215ENST00000482714 SMAD5-AS1Q9Y6J3 95 aa11.5□□□□□ -0.57
CCM2-215ENST00000482714 NOTCH1P46531 2555 aa11.5□□□□□ -0.57
CCM2-215ENST00000482714 TRAV5A0A0B4J249 113 aa11.49□□□□□ -0.57
CCM2-215ENST00000482714 ID1P41134 155 aa11.49□□□□□ -0.57
CCM2-215ENST00000482714 CDC34P49427 236 aaPredicted RBP11.49□□□□□ -0.57
CCM2-215ENST00000482714 NKX2-5P52952 324 aaPredicted RBP11.49□□□□□ -0.57
CCM2-215ENST00000482714 KRTAP10-11P60412 298 aa11.49□□□□□ -0.57
CCM2-215ENST00000482714 RAB2AP61019 212 aa11.49□□□□□ -0.57
CCM2-215ENST00000482714 KHDC3LQ587J8 217 aa11.49□□□□□ -0.57
CCM2-215ENST00000482714 OR51M1Q9H341 326 aa11.49□□□□□ -0.57
CCM2-215ENST00000482714 ISLRO14498 428 aa11.48□□□□□ -0.57
CCM2-215ENST00000482714 ZNF253O75346 499 aa11.48□□□□□ -0.57
CCM2-215ENST00000482714 STAG3L2P0CL84 134 aa11.48□□□□□ -0.57
CCM2-215ENST00000482714 STAG3L3P0CL85 134 aa11.48□□□□□ -0.57
CCM2-215ENST00000482714 IGLC2P0DOY2 106 aa11.48□□□□□ -0.57
CCM2-215ENST00000482714 PDE6HQ13956 83 aa11.48□□□□□ -0.57
CCM2-215ENST00000482714 MORN5Q5VZ52 161 aa11.48□□□□□ -0.57
CCM2-215ENST00000482714 FAM122CQ6P4D5 195 aa11.48□□□□□ -0.57
CCM2-215ENST00000482714 GBGT1Q8N5D6 347 aa11.48□□□□□ -0.57
CCM2-215ENST00000482714 RAB24Q969Q5 203 aa11.48□□□□□ -0.57
CCM2-215ENST00000482714 IGKV3-7A0A075B6H7 116 aa11.47□□□□□ -0.57
CCM2-215ENST00000482714 CTXND1A0A1B0GTU2 59 aa11.47□□□□□ -0.57
CCM2-215ENST00000482714 SNRPD3P62318 126 aaKnown RBP11.47□□□□□ -0.57
CCM2-215ENST00000482714 LCN15Q6UWW0 184 aa11.47□□□□□ -0.57
CCM2-215ENST00000482714 TMED6Q8WW62 240 aa11.47□□□□□ -0.57
CCM2-215ENST00000482714 SLC50A1Q9BRV3 221 aa11.47□□□□□ -0.57
CCM2-215ENST00000482714 PAXXQ9BUH6 204 aa11.47□□□□□ -0.57
CCM2-215ENST00000482714 SLC25A2Q9BXI2 301 aa11.47□□□□□ -0.57
CCM2-215ENST00000482714 DNAH3Q8TD57 4116 aa11.46□□□□□ -0.57
CCM2-215ENST00000482714 NBEAP1P0C6P0 100 aa11.46□□□□□ -0.57
CCM2-215ENST00000482714 SPATA31B1PQ5VZV4 182 aa11.46□□□□□ -0.57
CCM2-215ENST00000482714 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.46□□□□□ -0.57
CCM2-215ENST00000482714 WFDC3Q8IUB2 231 aa11.46□□□□□ -0.57
CCM2-215ENST00000482714 RNF141Q8WVD5 230 aa11.46□□□□□ -0.57
CCM2-215ENST00000482714 SOCS3O14543 225 aa11.45□□□□□ -0.58
CCM2-215ENST00000482714 OR7C2O60412 319 aa11.45□□□□□ -0.58
CCM2-215ENST00000482714 CXorf1O96002 111 aa11.45□□□□□ -0.58
CCM2-215ENST00000482714 PSMB3P49720 205 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms