RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 SAMD13Q5VXD3 122 aa15.47■□□□□ 0.07
SEC13-217ENST00000482647 UHRF2Q96PU4 802 aa15.47■□□□□ 0.07
SEC13-217ENST00000482647 RSG1Q9BU20 258 aa15.47■□□□□ 0.07
SEC13-217ENST00000482647 DNAJC4Q9NNZ3 241 aa15.47■□□□□ 0.07
SEC13-217ENST00000482647 HSPB11Q9Y547 144 aa15.47■□□□□ 0.07
SEC13-217ENST00000482647 KIR2DL5BA0A0G2JN68 375 aa15.46■□□□□ 0.07
SEC13-217ENST00000482647 KIR2DL5BA0A0G2JPC4 375 aa15.46■□□□□ 0.07
SEC13-217ENST00000482647 RPL35AP18077 110 aaKnown RBP15.46■□□□□ 0.07
SEC13-217ENST00000482647 OPCMLQ14982 345 aa15.46■□□□□ 0.07
SEC13-217ENST00000482647 PSMG4Q5JS54 123 aa15.46■□□□□ 0.07
SEC13-217ENST00000482647 MIC13Q5XKP0 118 aa15.46■□□□□ 0.07
SEC13-217ENST00000482647 KIR2DL5AQ8N109 375 aa15.46■□□□□ 0.07
SEC13-217ENST00000482647 KIR2DL5BQ8NHK3 375 aa15.46■□□□□ 0.07
SEC13-217ENST00000482647 SLC39A9Q9NUM3 307 aa15.46■□□□□ 0.07
SEC13-217ENST00000482647 UBE2CO00762 179 aa15.45■□□□□ 0.06
SEC13-217ENST00000482647 RPL7P18124 248 aaKnown RBP15.45■□□□□ 0.06
SEC13-217ENST00000482647 MEOX2P50222 304 aa15.45■□□□□ 0.06
SEC13-217ENST00000482647 B2MP61769 119 aa15.45■□□□□ 0.06
SEC13-217ENST00000482647 C10orf113Q5VZT2 155 aa15.45■□□□□ 0.06
SEC13-217ENST00000482647 LINC00305Q7Z4B0 112 aa15.45■□□□□ 0.06
SEC13-217ENST00000482647 OR1L4Q8NGR5 311 aa15.45■□□□□ 0.06
SEC13-217ENST00000482647 TMEM37Q8WXS4 190 aa15.45■□□□□ 0.06
SEC13-217ENST00000482647 ATP5SQ99766 215 aa15.45■□□□□ 0.06
SEC13-217ENST00000482647 NPCDR1Q9BY65 106 aa15.45■□□□□ 0.06
SEC13-217ENST00000482647 ZNF709Q8N972 641 aa15.44■□□□□ 0.06
SEC13-217ENST00000482647 PFDN5Q99471 154 aa15.44■□□□□ 0.06
SEC13-217ENST00000482647 WDR61Q9GZS3 305 aaKnown RBP15.44■□□□□ 0.06
SEC13-217ENST00000482647 PXMP4Q9Y6I8 212 aa15.44■□□□□ 0.06
SEC13-217ENST00000482647 ISLRO14498 428 aa15.43■□□□□ 0.06
SEC13-217ENST00000482647 ATF4P18848 351 aaPredicted RBP15.43■□□□□ 0.06
SEC13-217ENST00000482647 PSMB3P49720 205 aa15.43■□□□□ 0.06
SEC13-217ENST00000482647 STHQ8IWL8 128 aa15.43■□□□□ 0.06
SEC13-217ENST00000482647 LINC00052Q96N35 136 aa15.43■□□□□ 0.06
SEC13-217ENST00000482647 SMIM3Q9BZL3 60 aa15.43■□□□□ 0.06
SEC13-217ENST00000482647 CSTL1Q9H114 145 aa15.43■□□□□ 0.06
SEC13-217ENST00000482647 STAB2Q8WWQ8 2551 aa15.42■□□□□ 0.06
SEC13-217ENST00000482647 SOCS3O14543 225 aa15.42■□□□□ 0.06
SEC13-217ENST00000482647 IFNA5P01569 189 aa15.42■□□□□ 0.06
SEC13-217ENST00000482647 ACTL10Q5JWF8 245 aa15.42■□□□□ 0.06
SEC13-217ENST00000482647 SCGB1C1Q8TD33 95 aa15.42■□□□□ 0.06
SEC13-217ENST00000482647 C16orf92Q96LL3 132 aa15.42■□□□□ 0.06
SEC13-217ENST00000482647 KCNIP2Q9NS61 270 aa15.42■□□□□ 0.06
SEC13-217ENST00000482647 KNCNA6PVL3 124 aa15.41■□□□□ 0.06
SEC13-217ENST00000482647 C17orf112F2Z3M2 114 aa15.41■□□□□ 0.06
SEC13-217ENST00000482647 Q5BKY6 102 aa15.41■□□□□ 0.06
SEC13-217ENST00000482647 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.41■□□□□ 0.06
SEC13-217ENST00000482647 Q6ZWC4 215 aa15.41■□□□□ 0.06
SEC13-217ENST00000482647 OR2T35Q8NGX2 323 aa15.41■□□□□ 0.06
SEC13-217ENST00000482647 RETNQ9HD89 108 aa15.41■□□□□ 0.06
SEC13-217ENST00000482647 GATAD1Q8WUU5 269 aa15.4■□□□□ 0.06
SEC13-217ENST00000482647 C17orf77Q96MU5 243 aa15.4■□□□□ 0.06
SEC13-217ENST00000482647 WWC2-AS2Q96NR7 200 aa15.4■□□□□ 0.06
SEC13-217ENST00000482647 TRPT1Q86TN4 253 aaKnown RBP15.39■□□□□ 0.05
SEC13-217ENST00000482647 BPIFA4PQ86YQ2 179 aa15.39■□□□□ 0.05
SEC13-217ENST00000482647 INO80EQ8NBZ0 244 aaPredicted RBP15.39■□□□□ 0.05
SEC13-217ENST00000482647 AQP10Q96PS8 301 aa15.39■□□□□ 0.05
SEC13-217ENST00000482647 TENM3Q9P273 2699 aa15.39■□□□□ 0.05
SEC13-217ENST00000482647 A0A087X0K7 114 aa15.38■□□□□ 0.05
SEC13-217ENST00000482647 WFDC1Q9HC57 220 aa15.38■□□□□ 0.05
SEC13-217ENST00000482647 TP53TG1Q9Y2A0 90 aa15.38■□□□□ 0.05
SEC13-217ENST00000482647 SPRY2O43597 315 aa15.37■□□□□ 0.05
SEC13-217ENST00000482647 MORN5Q5VZ52 161 aa15.37■□□□□ 0.05
SEC13-217ENST00000482647 LRRC20Q8TCA0 184 aa15.37■□□□□ 0.05
SEC13-217ENST00000482647 PARD6GQ9BYG4 376 aaPredicted RBP15.37■□□□□ 0.05
SEC13-217ENST00000482647 RPRMQ9NS64 109 aa15.37■□□□□ 0.05
SEC13-217ENST00000482647 TRAV5A0A0B4J249 113 aa15.36■□□□□ 0.05
SEC13-217ENST00000482647 MRPS12O15235 138 aaKnown RBP15.36■□□□□ 0.05
SEC13-217ENST00000482647 SPP1P10451 314 aa15.36■□□□□ 0.05
SEC13-217ENST00000482647 DEFB135Q30KP9 77 aa15.36■□□□□ 0.05
SEC13-217ENST00000482647 MORN3Q6PF18 240 aaPredicted RBP15.36■□□□□ 0.05
SEC13-217ENST00000482647 FOXI2Q6ZQN5 318 aa15.36■□□□□ 0.05
SEC13-217ENST00000482647 OVOL2Q9BRP0 275 aa15.36■□□□□ 0.05
SEC13-217ENST00000482647 FXYD6-FXYD2A0A087WZ82 144 aa15.35■□□□□ 0.05
SEC13-217ENST00000482647 TRAV8-2A0A0B4J237 113 aa15.35■□□□□ 0.05
SEC13-217ENST00000482647 H3BMM0 161 aa15.35■□□□□ 0.05
SEC13-217ENST00000482647 CA1P00915 261 aaPredicted RBP15.35■□□□□ 0.05
SEC13-217ENST00000482647 HLA-DRB4P13762 266 aa15.35■□□□□ 0.05
SEC13-217ENST00000482647 GCSAMLQ5JQS6 135 aa15.35■□□□□ 0.05
SEC13-217ENST00000482647 SPATA31B1PQ5VZV4 182 aa15.35■□□□□ 0.05
SEC13-217ENST00000482647 EBLN2Q6P2I7 272 aa15.35■□□□□ 0.05
SEC13-217ENST00000482647 RNF183Q96D59 192 aa15.35■□□□□ 0.05
SEC13-217ENST00000482647 C20orf173Q96LM9 149 aa15.35■□□□□ 0.05
SEC13-217ENST00000482647 SAV1Q9H4B6 383 aaPredicted RBP15.35■□□□□ 0.05
SEC13-217ENST00000482647 HLA-DRB4X5D2U9 266 aa15.35■□□□□ 0.05
SEC13-217ENST00000482647 CXCL2P19875 107 aa15.34■□□□□ 0.05
SEC13-217ENST00000482647 NUTF2P61970 127 aaKnown RBP15.34■□□□□ 0.05
SEC13-217ENST00000482647 ZNF266Q14584 549 aa15.34■□□□□ 0.05
SEC13-217ENST00000482647 TMEM41BQ5BJD5 291 aa15.34■□□□□ 0.05
SEC13-217ENST00000482647 FAM78BQ5VT40 261 aa15.34■□□□□ 0.05
SEC13-217ENST00000482647 IGFL4Q6B9Z1 124 aa15.34■□□□□ 0.05
SEC13-217ENST00000482647 HRH4Q9H3N8 390 aa15.34■□□□□ 0.05
SEC13-217ENST00000482647 TNFSF18Q9UNG2 199 aa15.34■□□□□ 0.05
SEC13-217ENST00000482647 IGLC2P0DOY2 106 aa15.33■□□□□ 0.04
SEC13-217ENST00000482647 GUK1Q16774 197 aa15.33■□□□□ 0.04
SEC13-217ENST00000482647 LCN15Q6UWW0 184 aa15.33■□□□□ 0.04
SEC13-217ENST00000482647 DEFB1P60022 68 aa15.32■□□□□ 0.04
SEC13-217ENST00000482647 FFAR4Q5NUL3 377 aa15.32■□□□□ 0.04
SEC13-217ENST00000482647 GDF5OSQ5U4N7 250 aa15.32■□□□□ 0.04
SEC13-217ENST00000482647 RNF182Q8N6D2 247 aa15.32■□□□□ 0.04
SEC13-217ENST00000482647 SLC50A1Q9BRV3 221 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms