RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 MORN5Q5VZ52 161 aa15.07■□□□□ 0
TRAPPC12-220ENST00000482645 DPPA3Q6W0C5 159 aa15.07■□□□□ 0
TRAPPC12-220ENST00000482645 ZNF767PQ75MW2 155 aa15.07■□□□□ 0
TRAPPC12-220ENST00000482645 MIR17HGQ75NE6 70 aa15.07■□□□□ 0
TRAPPC12-220ENST00000482645 PCNPQ8WW12 178 aaKnown RBP15.07■□□□□ 0
TRAPPC12-220ENST00000482645 RNF2Q99496 336 aa15.07■□□□□ 0
TRAPPC12-220ENST00000482645 SCRT1Q9BWW7 348 aa15.07■□□□□ 0
TRAPPC12-220ENST00000482645 MRPL32Q9BYC8 188 aaKnown RBP15.07■□□□□ 0
TRAPPC12-220ENST00000482645 SLC25A39Q9BZJ4 359 aaPredicted RBP15.07■□□□□ 0
TRAPPC12-220ENST00000482645 ACTR3CQ9C0K3 210 aaPredicted RBP15.07■□□□□ 0
TRAPPC12-220ENST00000482645 FUT9Q9Y231 359 aa15.07■□□□□ 0
TRAPPC12-220ENST00000482645 H3BRN7 92 aa15.06■□□□□ 0
TRAPPC12-220ENST00000482645 CHEK1O14757 476 aa15.06■□□□□ 0
TRAPPC12-220ENST00000482645 IGLV1-51P01701 117 aa15.06■□□□□ 0
TRAPPC12-220ENST00000482645 CRYBB3P26998 211 aa15.06■□□□□ 0
TRAPPC12-220ENST00000482645 ZNF726P1Q15940 193 aa15.06■□□□□ 0
TRAPPC12-220ENST00000482645 LEMD1Q68G75 181 aa15.06■□□□□ 0
TRAPPC12-220ENST00000482645 NOTCH1P46531 2555 aa15.05■□□□□ 0
TRAPPC12-220ENST00000482645 BMI1P35226 326 aa15.05■□□□□ -0
TRAPPC12-220ENST00000482645 DEFB114Q30KQ6 69 aa15.05■□□□□ -0
TRAPPC12-220ENST00000482645 SHANK2-AS3Q9BTD1 123 aa15.05■□□□□ -0
TRAPPC12-220ENST00000482645 TECRQ9NZ01 308 aaKnown RBP15.05■□□□□ -0
TRAPPC12-220ENST00000482645 TRAV5A0A0B4J249 113 aa15.04■□□□□ -0
TRAPPC12-220ENST00000482645 CTXND1A0A1B0GTU2 59 aa15.04■□□□□ -0
TRAPPC12-220ENST00000482645 A0A1B0GV50 99 aa15.04■□□□□ -0
TRAPPC12-220ENST00000482645 IZUMO1RA6ND01 250 aa15.04■□□□□ -0
TRAPPC12-220ENST00000482645 S100A7AQ86SG5 101 aa15.04■□□□□ -0
TRAPPC12-220ENST00000482645 RAB24Q969Q5 203 aa15.04■□□□□ -0
TRAPPC12-220ENST00000482645 NBEAL1Q6ZS30 2694 aa15.04■□□□□ -0
TRAPPC12-220ENST00000482645 IGKV3-7A0A075B6H7 116 aa15.03■□□□□ -0
TRAPPC12-220ENST00000482645 A0A1W2PS18 150 aa15.03■□□□□ -0
TRAPPC12-220ENST00000482645 MAP1LC3B2A6NCE7 125 aa15.03■□□□□ -0
TRAPPC12-220ENST00000482645 LCN15Q6UWW0 184 aa15.03■□□□□ -0
TRAPPC12-220ENST00000482645 RBPMS2Q6ZRY4 209 aaKnown RBP15.03■□□□□ -0
TRAPPC12-220ENST00000482645 MAP1LC3BQ9GZQ8 125 aa15.03■□□□□ -0
TRAPPC12-220ENST00000482645 TMEM231Q9H6L2 316 aa15.03■□□□□ -0
TRAPPC12-220ENST00000482645 ZNF98A6NK75 572 aa15.02■□□□□ -0
TRAPPC12-220ENST00000482645 RGS13O14921 159 aa15.02■□□□□ -0
TRAPPC12-220ENST00000482645 WIPF1O43516 503 aa15.02■□□□□ -0
TRAPPC12-220ENST00000482645 S100A7P31151 101 aa15.02■□□□□ -0
TRAPPC12-220ENST00000482645 FGF8P55075 233 aaPredicted RBP15.02■□□□□ -0
TRAPPC12-220ENST00000482645 RPL11P62913 178 aaKnown RBP15.02■□□□□ -0
TRAPPC12-220ENST00000482645 LCN12Q6JVE5 192 aa15.02■□□□□ -0
TRAPPC12-220ENST00000482645 TMEM61Q8N0U2 210 aa15.02■□□□□ -0
TRAPPC12-220ENST00000482645 GRAMD2BQ96HH9 432 aa15.02■□□□□ -0
TRAPPC12-220ENST00000482645 SLC25A2Q9BXI2 301 aa15.02■□□□□ -0
TRAPPC12-220ENST00000482645 PFDN2Q9UHV9 154 aa15.02■□□□□ -0
TRAPPC12-220ENST00000482645 H2AFB1P0C5Y9 115 aa15.02□□□□□ -0.01
TRAPPC12-220ENST00000482645 TAS2R45P59539 299 aa15.02□□□□□ -0.01
TRAPPC12-220ENST00000482645 KRTAP10-11P60412 298 aa15.02□□□□□ -0.01
TRAPPC12-220ENST00000482645 GUCA2BQ16661 112 aa15.02□□□□□ -0.01
TRAPPC12-220ENST00000482645 KHDC3LQ587J8 217 aa15.02□□□□□ -0.01
TRAPPC12-220ENST00000482645 TCF24Q7RTU0 167 aa15.02□□□□□ -0.01
TRAPPC12-220ENST00000482645 IQCF2Q8IXL9 164 aa15.02□□□□□ -0.01
TRAPPC12-220ENST00000482645 LRRC20Q8TCA0 184 aa15.02□□□□□ -0.01
TRAPPC12-220ENST00000482645 OR7C2O60412 319 aa15.01□□□□□ -0.01
TRAPPC12-220ENST00000482645 ARL14EPLP0DKL9 152 aa15.01□□□□□ -0.01
TRAPPC12-220ENST00000482645 RAB14P61106 215 aa15.01□□□□□ -0.01
TRAPPC12-220ENST00000482645 BEAN1Q3B7T3 259 aa15.01□□□□□ -0.01
TRAPPC12-220ENST00000482645 SFT2D1Q8WV19 159 aa15.01□□□□□ -0.01
TRAPPC12-220ENST00000482645 U3KQE9 123 aa15.01□□□□□ -0.01
TRAPPC12-220ENST00000482645 SORL1Q92673 2214 aa15□□□□□ -0.01
TRAPPC12-220ENST00000482645 BUB3O43684 328 aa15□□□□□ -0.01
TRAPPC12-220ENST00000482645 PRB2P02812 416 aaPredicted RBP15□□□□□ -0.01
TRAPPC12-220ENST00000482645 BLOC1S1P78537 153 aa15□□□□□ -0.01
TRAPPC12-220ENST00000482645 EGFEM1PQ0D2K5 195 aa15□□□□□ -0.01
TRAPPC12-220ENST00000482645 OR2K2Q8NGT1 345 aa15□□□□□ -0.01
TRAPPC12-220ENST00000482645 SAT2Q96F10 170 aaPredicted RBP15□□□□□ -0.01
TRAPPC12-220ENST00000482645 DNAH3Q8TD57 4116 aa14.99□□□□□ -0.01
TRAPPC12-220ENST00000482645 NMBP08949 121 aa14.99□□□□□ -0.01
TRAPPC12-220ENST00000482645 STAG3L2P0CL84 134 aa14.99□□□□□ -0.01
TRAPPC12-220ENST00000482645 STAG3L3P0CL85 134 aa14.99□□□□□ -0.01
TRAPPC12-220ENST00000482645 PYYP10082 97 aa14.99□□□□□ -0.01
TRAPPC12-220ENST00000482645 TFPI2P48307 235 aa14.99□□□□□ -0.01
TRAPPC12-220ENST00000482645 C16orf54Q6UWD8 224 aa14.99□□□□□ -0.01
TRAPPC12-220ENST00000482645 OR8I2Q8N0Y5 310 aa14.99□□□□□ -0.01
TRAPPC12-220ENST00000482645 GBGT1Q8N5D6 347 aa14.99□□□□□ -0.01
TRAPPC12-220ENST00000482645 FAM167A-AS1Q96KT0 104 aa14.99□□□□□ -0.01
TRAPPC12-220ENST00000482645 ZNF256Q9Y2P7 627 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC12-220ENST00000482645 GP9P14770 177 aa14.98□□□□□ -0.01
TRAPPC12-220ENST00000482645 PRR25Q96S07 402 aa14.98□□□□□ -0.01
TRAPPC12-220ENST00000482645 HRH4Q9H3N8 390 aa14.98□□□□□ -0.01
TRAPPC12-220ENST00000482645 RNF24Q9Y225 148 aa14.98□□□□□ -0.01
TRAPPC12-220ENST00000482645 CXorf1O96002 111 aa14.97□□□□□ -0.01
TRAPPC12-220ENST00000482645 OR10J4P0C629 311 aa14.97□□□□□ -0.01
TRAPPC12-220ENST00000482645 UBE2L3P68036 154 aaKnown RBP14.97□□□□□ -0.01
TRAPPC12-220ENST00000482645 GLMPQ8WWB7 406 aa14.97□□□□□ -0.01
TRAPPC12-220ENST00000482645 MBD3L1Q8WWY6 194 aa14.97□□□□□ -0.01
TRAPPC12-220ENST00000482645 ZNF503Q96F45 646 aa14.97□□□□□ -0.01
TRAPPC12-220ENST00000482645 PAXXQ9BUH6 204 aa14.97□□□□□ -0.01
TRAPPC12-220ENST00000482645 ZMAT5Q9UDW3 170 aaKnown RBP14.97□□□□□ -0.01
TRAPPC12-220ENST00000482645 SNRPCP09234 159 aaKnown RBP14.97□□□□□ -0.01
TRAPPC12-220ENST00000482645 KPRPQ5T749 579 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC12-220ENST00000482645 SIGLEC15Q6ZMC9 328 aa14.97□□□□□ -0.01
TRAPPC12-220ENST00000482645 PQLC2Q6ZP29 291 aa14.97□□□□□ -0.01
TRAPPC12-220ENST00000482645 BPIFA4PQ86YQ2 179 aa14.97□□□□□ -0.01
TRAPPC12-220ENST00000482645 WFDC3Q8IUB2 231 aa14.97□□□□□ -0.01
TRAPPC12-220ENST00000482645 STXBP6Q8NFX7 210 aa14.97□□□□□ -0.01
TRAPPC12-220ENST00000482645 TRAV25A0A0B4J276 109 aa14.96□□□□□ -0.02
TRAPPC12-220ENST00000482645 HELTA6NFD8 242 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms