RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 PSMG4Q5JS54 123 aa7.42□□□□□ -1.22
SPTLC1-206ENST00000482632 STHQ8IWL8 128 aa7.42□□□□□ -1.22
SPTLC1-206ENST00000482632 GGACTQ9BVM4 153 aa7.42□□□□□ -1.22
SPTLC1-206ENST00000482632 SCRT1Q9BWW7 348 aa7.42□□□□□ -1.22
SPTLC1-206ENST00000482632 C11orf1Q9H5F2 150 aa7.42□□□□□ -1.22
SPTLC1-206ENST00000482632 TRAV2A0A0B4J234 112 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 ZNF98A6NK75 572 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 K7EQG2 157 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 MPC2O95563 127 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 GALR1P47211 349 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 CAMLGP49069 296 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 NHLH2Q02577 135 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 FCN2Q15485 313 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 S100A7AQ86SG5 101 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 OR5C1Q8NGR4 320 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 THAP6Q8TBB0 222 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 LINC00052Q96N35 136 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 UHRF2Q96PU4 802 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 MGST2Q99735 147 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 TM2D3Q9BRN9 247 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 SLC25A32Q9H2D1 315 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 NRN1Q9NPD7 142 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 MBD2Q9UBB5 411 aa7.41□□□□□ -1.22
SPTLC1-206ENST00000482632 KNCNA6PVL3 124 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 H0YIZ8 118 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 CXCL3P19876 107 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 ID1P41134 155 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 ATP6V1FQ16864 119 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 DEFB135Q30KP9 77 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 ACTL10Q5JWF8 245 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 C1orf194Q5T5A4 169 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 MIC13Q5XKP0 118 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 Q6ZRG5 221 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 STPG3Q8N7X2 389 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 LRRC20Q8TCA0 184 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 DCANP1Q8TF63 244 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 C16orf92Q96LL3 132 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 WWC2-AS2Q96NR7 200 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 RSG1Q9BU20 258 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 SLC25A39Q9BZJ4 359 aaPredicted RBP7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 SMIM3Q9BZL3 60 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 ARV1Q9H2C2 271 aa7.4□□□□□ -1.22
SPTLC1-206ENST00000482632 DNAH9Q9NYC9 4486 aa7.4□□□□□ -1.23
SPTLC1-206ENST00000482632 H3BRN7 92 aa7.39□□□□□ -1.23
SPTLC1-206ENST00000482632 C10orf113Q5VZT2 155 aa7.39□□□□□ -1.23
SPTLC1-206ENST00000482632 LINC00322Q6ZN03 302 aaPredicted RBP7.39□□□□□ -1.23
SPTLC1-206ENST00000482632 OR11H7Q8NGC8 314 aa7.39□□□□□ -1.23
SPTLC1-206ENST00000482632 SLC45A2Q9UMX9 530 aa7.39□□□□□ -1.23
SPTLC1-206ENST00000482632 WDR83OSQ9Y284 106 aa7.39□□□□□ -1.23
SPTLC1-206ENST00000482632 CA1P00915 261 aaPredicted RBP7.38□□□□□ -1.23
SPTLC1-206ENST00000482632 RPL12P30050 165 aaKnown RBP7.38□□□□□ -1.23
SPTLC1-206ENST00000482632 B2MP61769 119 aa7.38□□□□□ -1.23
SPTLC1-206ENST00000482632 LCE3BQ5TA77 95 aa7.38□□□□□ -1.23
SPTLC1-206ENST00000482632 LINC00305Q7Z4B0 112 aa7.38□□□□□ -1.23
SPTLC1-206ENST00000482632 ZNF709Q8N972 641 aa7.38□□□□□ -1.23
SPTLC1-206ENST00000482632 OR1L4Q8NGR5 311 aa7.38□□□□□ -1.23
SPTLC1-206ENST00000482632 GPR82Q96P67 336 aa7.38□□□□□ -1.23
SPTLC1-206ENST00000482632 SHANK2-AS3Q9BTD1 123 aa7.38□□□□□ -1.23
SPTLC1-206ENST00000482632 RNF126Q9BV68 326 aa7.38□□□□□ -1.23
SPTLC1-206ENST00000482632 CSTL1Q9H114 145 aa7.38□□□□□ -1.23
SPTLC1-206ENST00000482632 HSPB11Q9Y547 144 aa7.38□□□□□ -1.23
SPTLC1-206ENST00000482632 PXMP4Q9Y6I8 212 aa7.38□□□□□ -1.23
SPTLC1-206ENST00000482632 IFNA5P01569 189 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 IGKV3-20P01619 116 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 SNRPCP09234 159 aaKnown RBP7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 RPL7P18124 248 aaKnown RBP7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 PSMB3P49720 205 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 MEOX2P50222 304 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 DEFB1P60022 68 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 PLP1P60201 277 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 OPCMLQ14982 345 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 VWC2Q2TAL6 325 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 PXDC1Q5TGL8 231 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 PATE2Q6UY27 113 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 SCGB1C1Q8TD33 95 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 ATP5SQ99766 215 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 NPCDR1Q9BY65 106 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 SLC39A9Q9NUM3 307 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 RNF24Q9Y225 148 aa7.37□□□□□ -1.23
SPTLC1-206ENST00000482632 RYR2Q92736 4967 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 COL7A1Q02388 2944 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 FXYD6-FXYD2A0A087WZ82 144 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 KIR2DL5BA0A0G2JN68 375 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 KIR2DL5BA0A0G2JPC4 375 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 C17orf112F2Z3M2 114 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 UBE2CO00762 179 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 SPRY2O43597 315 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 MPDU1O75352 247 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 RPL29P47914 159 aaKnown RBP7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 OXA1LQ15070 435 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 IGFL4Q6B9Z1 124 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 KIR2DL5AQ8N109 375 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 OR4B1Q8NGF8 309 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 KIR2DL5BQ8NHK3 375 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 CLUHP3Q96NS8 147 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 PFDN5Q99471 154 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 DNAJC4Q9NNZ3 241 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 TENM3Q9P273 2699 aa7.36□□□□□ -1.23
SPTLC1-206ENST00000482632 SACSQ9NZJ4 4579 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms