RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 C8orf46Q8TAG6 207 aa11.81□□□□□ -0.52
ATG4B-220ENST00000482507 F11RQ9Y624 299 aaKnown RBP11.81□□□□□ -0.52
ATG4B-220ENST00000482507 SH2D7A6NKC9 451 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-220ENST00000482507 NPSP0C0P6 89 aa11.8□□□□□ -0.52
ATG4B-220ENST00000482507 PSG1P11464 419 aa11.8□□□□□ -0.52
ATG4B-220ENST00000482507 PLP1P60201 277 aa11.8□□□□□ -0.52
ATG4B-220ENST00000482507 CYB5R2Q6BCY4 276 aa11.8□□□□□ -0.52
ATG4B-220ENST00000482507 BORCS7Q96B45 105 aa11.8□□□□□ -0.52
ATG4B-220ENST00000482507 FBXL15Q9H469 300 aa11.8□□□□□ -0.52
ATG4B-220ENST00000482507 BUB1B-PAK6H3BSN5 160 aa11.8□□□□□ -0.52
ATG4B-220ENST00000482507 DLEU1O43261 78 aa11.8□□□□□ -0.52
ATG4B-220ENST00000482507 HSBP1O75506 76 aa11.8□□□□□ -0.52
ATG4B-220ENST00000482507 RELQ04864 619 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-220ENST00000482507 ATP5L2Q7Z4Y8 100 aa11.8□□□□□ -0.52
ATG4B-220ENST00000482507 PPP1R27Q86WC6 154 aa11.8□□□□□ -0.52
ATG4B-220ENST00000482507 CHRDL1Q9BU40 450 aa11.8□□□□□ -0.52
ATG4B-220ENST00000482507 INSIG2Q9Y5U4 225 aa11.8□□□□□ -0.52
ATG4B-220ENST00000482507 CENPEQ02224 2701 aa11.8□□□□□ -0.52
ATG4B-220ENST00000482507 C2orf70A6NJV1 201 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 M0R2Z0 102 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 TOX4O94842 621 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 IGLC1P0CG04 106 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 COX7A1P24310 79 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 FOXA3P55318 350 aaPredicted RBP11.79□□□□□ -0.52
ATG4B-220ENST00000482507 LDLRAD2Q5SZI1 272 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 SSX8Q7RTT4 187 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 IGFBPL1Q8WX77 278 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 FMC1Q96HJ9 113 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 PGLYRP4Q96LB8 373 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 LYZP61626 148 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 PMCHL1Q16048 86 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 FAM120AOSQ5T036 256 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 EXOC3-AS1Q8N2X6 119 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 OR8B3Q8NGG8 313 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 C22orf15Q8WYQ4 148 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 SMIM12Q96EX1 92 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 OR8B2Q96RD0 313 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 UQCR10Q9UDW1 63 aa11.79□□□□□ -0.52
ATG4B-220ENST00000482507 A0A1W2PPR1 153 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 ZNF785A8K8V0 405 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 I3L2K1 104 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 OVOL3O00110 214 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 IGLV2-11P01706 119 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 HBBP68871 147 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 CIARTQ8N365 385 aaPredicted RBP11.78□□□□□ -0.52
ATG4B-220ENST00000482507 STPG4Q8N801 248 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 CLEC5AQ9NY25 188 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 HIGD1AQ9Y241 93 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 CSMD1Q96PZ7 3565 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 TENM4Q6N022 2769 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 CSMD2Q7Z408 3487 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 A1L4Q6 167 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 VSTM5A8MXK1 200 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 P01737 135 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 PAX2Q02962 417 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 Q56UQ5 140 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 Q6ZN92 141 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 SRSF12Q8WXF0 261 aaKnown RBP11.78□□□□□ -0.52
ATG4B-220ENST00000482507 ASCL2Q99929 193 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 SLC25A39Q9BZJ4 359 aaPredicted RBP11.78□□□□□ -0.52
ATG4B-220ENST00000482507 ZNF492Q9P255 531 aa11.78□□□□□ -0.52
ATG4B-220ENST00000482507 ANKRD39Q53RE8 183 aa11.77□□□□□ -0.52
ATG4B-220ENST00000482507 Q86TA4 180 aa11.77□□□□□ -0.52
ATG4B-220ENST00000482507 TNFRSF14Q92956 283 aa11.77□□□□□ -0.52
ATG4B-220ENST00000482507 A8MWL6 223 aa11.77□□□□□ -0.53
ATG4B-220ENST00000482507 IGKV1-17P01599 117 aa11.77□□□□□ -0.53
ATG4B-220ENST00000482507 APOBEC3AP31941 199 aaPredicted RBP11.77□□□□□ -0.53
ATG4B-220ENST00000482507 LINC00173Q6ZV60 143 aa11.77□□□□□ -0.53
ATG4B-220ENST00000482507 C17orf77Q96MU5 243 aa11.77□□□□□ -0.53
ATG4B-220ENST00000482507 TXN2Q99757 166 aa11.77□□□□□ -0.53
ATG4B-220ENST00000482507 HELZ2Q9BYK8 2649 aaKnown RBP11.76□□□□□ -0.53
ATG4B-220ENST00000482507 CT83Q5H943 113 aa11.76□□□□□ -0.53
ATG4B-220ENST00000482507 GOLT1AQ6ZVE7 132 aa11.76□□□□□ -0.53
ATG4B-220ENST00000482507 ASH1LQ9NR48 2969 aaKnown RBP11.76□□□□□ -0.53
ATG4B-220ENST00000482507 NPIPB6E9PJ23 425 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 LY6LH3BQJ8 138 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 NDUFB8O95169 186 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 RBP4P02753 201 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 HOXB4P17483 251 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-220ENST00000482507 FBLN7Q53RD9 439 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 COL5A1-AS1Q5SY13 56 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 OTORQ9NRC9 128 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 PPP1R14DQ9NXH3 145 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 LAMTOR2Q9Y2Q5 125 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 GOLT1BQ9Y3E0 138 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 PPIAL4CA0A0B4J2A2 164 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 APOHP02749 345 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-220ENST00000482507 PPIAL4GP0DN37 164 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 HNRNPA3P51991 378 aaKnown RBP11.75□□□□□ -0.53
ATG4B-220ENST00000482507 GAGE1Q13065 139 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 ZNF672Q499Z4 452 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-220ENST00000482507 PRNTQ86SH4 94 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 RPEQ96AT9 228 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 TP73-AS1Q9UF72 201 aa11.75□□□□□ -0.53
ATG4B-220ENST00000482507 SPG11Q96JI7 2443 aa11.74□□□□□ -0.53
ATG4B-220ENST00000482507 VPS13CQ709C8 3753 aa11.74□□□□□ -0.53
ATG4B-220ENST00000482507 B9A039 149 aa11.74□□□□□ -0.53
ATG4B-220ENST00000482507 K7EIM0 57 aa11.74□□□□□ -0.53
ATG4B-220ENST00000482507 IGLL1P15814 213 aa11.74□□□□□ -0.53
ATG4B-220ENST00000482507 RBPMS2Q6ZRY4 209 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms