RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 TCRBV3S1A0A5B6 114 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 INS-IGF2F8WCM5 200 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 UQCRQO14949 82 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 LEPROTO15243 131 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 EDF1O60869 148 aaKnown RBP2.84□□□□□ -1.95
VPS41-212ENST00000482217 IGHV3-13P01766 116 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 APOC3P02656 99 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 OR5AC1P0C628 307 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 CD28P10747 220 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 S100A4P26447 101 aaKnown RBP2.84□□□□□ -1.95
VPS41-212ENST00000482217 HLA-DMBP28068 263 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 EIF5AP63241 154 aaKnown RBP2.84□□□□□ -1.95
VPS41-212ENST00000482217 ZNF846Q147U1 533 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 PEA15Q15121 130 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 Q56UQ5 140 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 CGB2Q6NT52 195 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 C7orf65Q6ZTY9 151 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 TMUB2Q71RG4 321 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 Q8N2B8 174 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 Q8N377 158 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 CD177Q8N6Q3 437 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 OR4X2Q8NGF9 303 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 NAA60Q9H7X0 242 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 TXNL4BQ9NX01 149 aaKnown RBP2.84□□□□□ -1.95
VPS41-212ENST00000482217 BET1LQ9NYM9 111 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 WIZO95785 1651 aa2.84□□□□□ -1.95
VPS41-212ENST00000482217 MAGI2Q86UL8 1455 aa2.84□□□□□ -1.96
VPS41-212ENST00000482217 DLC1Q96QB1 1528 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 KIF21AQ7Z4S6 1674 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 LTN1O94822 1766 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 IGHV3OR15-7A0A075B7D8 119 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 C3orf85A0A1B0GTC6 90 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 A0A1W2PPR1 153 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 C7orf66A4D0T2 115 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 PINLYPA6NC86 204 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 SRRM5B3KS81 715 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 TMEM262E9PQX1 116 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 H3BT86 120 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 HIST1H2BKO60814 126 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 HBDP02042 147 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 CD3DP04234 171 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 HIST1H2BJP06899 126 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 CRYGAP11844 174 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 TAS2R45P59539 299 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 AKR1C1Q04828 323 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 SS18Q15532 418 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 ZNF678Q5SXM1 525 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 MIC13Q5XKP0 118 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 SOSTDC1Q6X4U4 206 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 Q6ZS92 163 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 FP248Q71RG6 208 aaPredicted RBP2.83□□□□□ -1.96
VPS41-212ENST00000482217 OR5D16Q8NGK9 328 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 OR5AK2Q8NH90 309 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 CLDND2Q8NHS1 167 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 LINC01006Q8NI28 216 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 CAMK2N2Q96S95 79 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 DSCR8Q96T75 97 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 PKMYT1Q99640 499 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 NPCDR1Q9BY65 106 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 BCL2L10Q9HD36 194 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 FAM60AQ9NP50 221 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 SLC39A9Q9NUM3 307 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 ASF1BQ9NVP2 202 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 PHLDA3Q9Y5J5 127 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 SERP1Q9Y6X1 66 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 ZNF646O15015 1829 aaPredicted RBP2.83□□□□□ -1.96
VPS41-212ENST00000482217 CFTRP13569 1480 aa2.83□□□□□ -1.96
VPS41-212ENST00000482217 MED1Q15648 1581 aaPredicted RBP2.83□□□□□ -1.96
VPS41-212ENST00000482217 MON2Q7Z3U7 1717 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 ARHGEF28Q8N1W1 1705 aaKnown RBP2.82□□□□□ -1.96
VPS41-212ENST00000482217 NACAE9PAV3 2078 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 IGHV3-43A0A0B4J1X8 118 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 IGKV3D-20A0A0C4DH25 116 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 KLF18A0A0U1RQI7 1052 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 A0A1B0GVX0 72 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 MCRIP1C9JLW8 97 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 PDCD5O14737 125 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 TLX1NBP0CAT3 122 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 CCL3P10147 92 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 CCL5P13501 91 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 TSPEAR-AS2P59090 65 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 DEFA5Q01523 94 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 Q0VG73 95 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 IQCJQ1A5X6 159 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 C2orf83Q53S99 150 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 PATE2Q6UY27 113 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 C10orf105Q8TEF2 133 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 C10orf82Q8WW14 230 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 PSMF1Q92530 271 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 DIRC1Q969H9 104 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 MRPS24Q96EL2 167 aaKnown RBP2.82□□□□□ -1.96
VPS41-212ENST00000482217 C1orf147Q96MC9 270 aaPredicted RBP2.82□□□□□ -1.96
VPS41-212ENST00000482217 SLC35B3Q9H1N7 401 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 HEXA-AS1Q9H8Q6 139 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 TMEM106BQ9NUM4 274 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 HHLA3Q9XRX5 114 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 NOP16Q9Y3C1 178 aaKnown RBP2.82□□□□□ -1.96
VPS41-212ENST00000482217 PPLO60437 1756 aa2.82□□□□□ -1.96
VPS41-212ENST00000482217 TCHHQ07283 1943 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 SCN1AP35498 2009 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms