RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 CNPY1Q3B7I2 92 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 SOHLH1Q5JUK2 328 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 SPANXN2Q5MJ10 180 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 PXDC1Q5TGL8 231 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 FAAP20Q6NZ36 180 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 EBLN2Q6P2I7 272 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 Q6ZRM9 215 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 Q6ZTC4 211 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 OR8I2Q8N0Y5 310 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 TMEM256Q8N2U0 113 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 TOMM5Q8N4H5 51 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 FAM24BQ8N5W8 94 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 THAP8Q8NA92 274 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 C15orf53Q8NAA6 179 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 CSNK1G2-AS1Q8NCQ2 148 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 BPIFCQ8NFQ6 507 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 OR4D5Q8NGN0 318 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 OR1B1Q8NGR6 318 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 MCFD2Q8NI22 146 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 TMEM170AQ8WVE7 144 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 NPIPB3Q92617 1050 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 PPP1R14BQ96C90 147 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 RAB40CQ96S21 281 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 PBDC1Q9BVG4 233 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 SLIRPQ9GZT3 109 aaKnown RBP2.99□□□□□ -1.93
VPS13D-208ENST00000481484 NAA50Q9GZZ1 169 aaKnown RBP2.99□□□□□ -1.93
VPS13D-208ENST00000481484 RBKSQ9H477 322 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 RPRMQ9NS64 109 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 DOK5Q9P104 306 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 APLNQ9ULZ1 77 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 DNAH2Q9P225 4427 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 KIAA1109Q2LD37 5005 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 FABP12A6NFH5 140 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 KNCNA6PVL3 124 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 LYRM9A8MSI8 78 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 K7EPK0 472 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 WRBO00258 174 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 SOCS3O14543 225 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 CTDSP2O14595 271 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 SYNGR2O43760 224 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 PITX3O75364 302 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 DEDDO75618 318 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 HBE1P02100 147 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 RBMY1A1P0DJD3 496 aaKnown RBP2.98□□□□□ -1.93
VPS13D-208ENST00000481484 RBMY1CP0DJD4 496 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 RPL7P18124 248 aaKnown RBP2.98□□□□□ -1.93
VPS13D-208ENST00000481484 TSPOP30536 169 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 PSG9Q00887 426 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 GAMTQ14353 236 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 RBMY1FQ15415 496 aaKnown RBP2.98□□□□□ -1.93
VPS13D-208ENST00000481484 RRN3P1Q2M238 152 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 LGALS9BQ3B8N2 356 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 RNF212Q495C1 297 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 TRIQKQ629K1 86 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 ACOT7LQ6ZUV0 252 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 TMED4Q7Z7H5 227 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 ZNF546Q86UE3 836 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 RPP25LQ8N5L8 163 aaKnown RBP2.98□□□□□ -1.93
VPS13D-208ENST00000481484 POM121L12Q8N7R1 296 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 C7orf50Q9BRJ6 194 aaKnown RBP2.98□□□□□ -1.93
VPS13D-208ENST00000481484 TMEM147Q9BVK8 224 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 CLEC5AQ9NY25 188 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 XCL2Q9UBD3 114 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 STRAPQ9Y3F4 350 aaKnown RBP2.98□□□□□ -1.93
VPS13D-208ENST00000481484 PCLOQ9Y6V0 5065 aa2.98□□□□□ -1.93
VPS13D-208ENST00000481484 DYNC1H1Q14204 4646 aaKnown RBP2.97□□□□□ -1.93
VPS13D-208ENST00000481484 IGKV1D-37A0A075B6S9 117 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 A0A087X0K7 114 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 A0A0J9YX75 114 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 LOC102723971A0A1B0GUV8 181 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 CENPXA8MT69 81 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 PRSS46E5RG02 174 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 BOLA2-SMG1P6H3BVE0 249 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 DEFB4AO15263 64 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 TSC22D2O75157 780 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 ADAP1O75689 374 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 NXPH3O95157 252 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 SFT2D2O95562 160 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 IFNA21P01568 189 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 INPP1P49441 399 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 TAS2R30P59541 319 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 PLP1P60201 277 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 RAP2BP61225 183 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 DLK1P80370 383 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 FHL2Q14192 279 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 C12orf74Q32Q52 190 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 PYDC2Q56P42 97 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 LCN15Q6UWW0 184 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 LYZL2Q7Z4W2 148 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 TMEM144Q7Z5S9 345 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 UBE2DNLQ8IWF7 75 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 ZNF709Q8N972 641 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 IGF2BP2-AS1Q96M15 143 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 SOSTQ9BQB4 213 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 C20orf144Q9BQM9 153 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 SLC50A1Q9BRV3 221 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 NIPSNAP3BQ9BS92 247 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 TMEM208Q9BTX3 173 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 GGACTQ9BVM4 153 aa2.97□□□□□ -1.93
VPS13D-208ENST00000481484 KRTAP17-1Q9BYP8 105 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms