RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 SIGLEC15Q6ZMC9 328 aa9.27□□□□□ -0.93
SHROOM3-205ENST00000481002 GNPNAT1Q96EK6 184 aaPredicted RBP9.27□□□□□ -0.93
SHROOM3-205ENST00000481002 SLC25A32Q9H2D1 315 aa9.27□□□□□ -0.93
SHROOM3-205ENST00000481002 MS4A6AQ9H2W1 248 aa9.27□□□□□ -0.93
SHROOM3-205ENST00000481002 SLC25A22Q9H936 323 aa9.27□□□□□ -0.93
SHROOM3-205ENST00000481002 FBN3Q75N90 2809 aa9.26□□□□□ -0.93
SHROOM3-205ENST00000481002 IGKV3-7A0A075B6H7 116 aa9.26□□□□□ -0.93
SHROOM3-205ENST00000481002 OR4C46A6NHA9 309 aa9.26□□□□□ -0.93
SHROOM3-205ENST00000481002 RPL7P18124 248 aaKnown RBP9.26□□□□□ -0.93
SHROOM3-205ENST00000481002 GALR1P47211 349 aa9.26□□□□□ -0.93
SHROOM3-205ENST00000481002 RPL11P62913 178 aaKnown RBP9.26□□□□□ -0.93
SHROOM3-205ENST00000481002 ACOT6Q3I5F7 207 aaPredicted RBP9.26□□□□□ -0.93
SHROOM3-205ENST00000481002 FAM78BQ5VT40 261 aa9.26□□□□□ -0.93
SHROOM3-205ENST00000481002 Q8N1Y9 231 aa9.26□□□□□ -0.93
SHROOM3-205ENST00000481002 GBGT1Q8N5D6 347 aa9.26□□□□□ -0.93
SHROOM3-205ENST00000481002 DCANP1Q8TF63 244 aa9.26□□□□□ -0.93
SHROOM3-205ENST00000481002 PRR25Q96S07 402 aa9.26□□□□□ -0.93
SHROOM3-205ENST00000481002 SH3BGRL3Q9H299 93 aa9.26□□□□□ -0.93
SHROOM3-205ENST00000481002 AURKAIP1Q9NWT8 199 aaPredicted RBP9.26□□□□□ -0.93
SHROOM3-205ENST00000481002 SMAD5-AS1Q9Y6J3 95 aa9.26□□□□□ -0.93
SHROOM3-205ENST00000481002 K7EQG2 157 aa9.25□□□□□ -0.93
SHROOM3-205ENST00000481002 DNASE2O00115 360 aaPredicted RBP9.25□□□□□ -0.93
SHROOM3-205ENST00000481002 MRPS12O15235 138 aaKnown RBP9.25□□□□□ -0.93
SHROOM3-205ENST00000481002 PFDN1O60925 122 aa9.25□□□□□ -0.93
SHROOM3-205ENST00000481002 SPP1P10451 314 aa9.25□□□□□ -0.93
SHROOM3-205ENST00000481002 M6PRP20645 277 aa9.25□□□□□ -0.93
SHROOM3-205ENST00000481002 C9orf62Q8N4C0 152 aa9.25□□□□□ -0.93
SHROOM3-205ENST00000481002 STXBP6Q8NFX7 210 aa9.25□□□□□ -0.93
SHROOM3-205ENST00000481002 C17orf77Q96MU5 243 aa9.25□□□□□ -0.93
SHROOM3-205ENST00000481002 ZNF471Q9BX82 626 aaPredicted RBP9.25□□□□□ -0.93
SHROOM3-205ENST00000481002 MRPL32Q9BYC8 188 aaKnown RBP9.25□□□□□ -0.93
SHROOM3-205ENST00000481002 SEPSECSQ9HD40 501 aaKnown RBP9.25□□□□□ -0.93
SHROOM3-205ENST00000481002 NRN1Q9NPD7 142 aa9.25□□□□□ -0.93
SHROOM3-205ENST00000481002 TRAV5A0A0B4J249 113 aa9.24□□□□□ -0.93
SHROOM3-205ENST00000481002 MBP02144 154 aa9.24□□□□□ -0.93
SHROOM3-205ENST00000481002 PRB2P02812 416 aaPredicted RBP9.24□□□□□ -0.93
SHROOM3-205ENST00000481002 CD7P09564 240 aa9.24□□□□□ -0.93
SHROOM3-205ENST00000481002 EIF5AP63241 154 aaKnown RBP9.24□□□□□ -0.93
SHROOM3-205ENST00000481002 GTSCR1Q86UQ5 136 aa9.24□□□□□ -0.93
SHROOM3-205ENST00000481002 BPIFA4PQ86YQ2 179 aa9.24□□□□□ -0.93
SHROOM3-205ENST00000481002 WFDC3Q8IUB2 231 aa9.24□□□□□ -0.93
SHROOM3-205ENST00000481002 FAM167A-AS1Q96KT0 104 aa9.24□□□□□ -0.93
SHROOM3-205ENST00000481002 FAM110AQ9BQ89 295 aa9.24□□□□□ -0.93
SHROOM3-205ENST00000481002 C19orf73Q9NVV2 129 aa9.24□□□□□ -0.93
SHROOM3-205ENST00000481002 FUT9Q9Y231 359 aa9.24□□□□□ -0.93
SHROOM3-205ENST00000481002 A0A087X0K7 114 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 K7EIL1 84 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 SEC11BP0C7V7 166 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 TFPI2P48307 235 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 MEOX2P50222 304 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 CMC4P56277 68 aaPredicted RBP9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 CD81P60033 236 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 RAB2AP61019 212 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 RHOBP62745 196 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 DEFA6Q01524 100 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 SPATA31B1PQ5VZV4 182 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 MIR17HGQ75NE6 70 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 BAP18Q8IXM2 172 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 RPP25LQ8N5L8 163 aaKnown RBP9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 OR10G4Q8NGN3 311 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 OR10G9Q8NGN4 311 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 OR10G7Q8NGN6 311 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 STOML3Q8TAV4 291 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 TMEM14CQ9P0S9 112 aa9.23□□□□□ -0.93
SHROOM3-205ENST00000481002 SOCS3O14543 225 aa9.22□□□□□ -0.93
SHROOM3-205ENST00000481002 IGLC2P0DOY2 106 aa9.22□□□□□ -0.93
SHROOM3-205ENST00000481002 TPT1P13693 172 aaKnown RBP9.22□□□□□ -0.93
SHROOM3-205ENST00000481002 ATF4P18848 351 aaPredicted RBP9.22□□□□□ -0.93
SHROOM3-205ENST00000481002 C4BPBP20851 252 aa9.22□□□□□ -0.93
SHROOM3-205ENST00000481002 ODF3L2Q3SX64 289 aa9.22□□□□□ -0.93
SHROOM3-205ENST00000481002 TMEM41BQ5BJD5 291 aa9.22□□□□□ -0.93
SHROOM3-205ENST00000481002 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.22□□□□□ -0.93
SHROOM3-205ENST00000481002 FAM24BQ8N5W8 94 aa9.22□□□□□ -0.93
SHROOM3-205ENST00000481002 SLC25A2Q9BXI2 301 aa9.22□□□□□ -0.93
SHROOM3-205ENST00000481002 HRH4Q9H3N8 390 aa9.22□□□□□ -0.93
SHROOM3-205ENST00000481002 RPRMQ9NS64 109 aa9.22□□□□□ -0.93
SHROOM3-205ENST00000481002 AGRNO00468 2067 aa9.21□□□□□ -0.93
SHROOM3-205ENST00000481002 A0A1W2PPV4 95 aa9.21□□□□□ -0.94
SHROOM3-205ENST00000481002 OR11H12B2RN74 326 aa9.21□□□□□ -0.94
SHROOM3-205ENST00000481002 NKX2-5P52952 324 aaPredicted RBP9.21□□□□□ -0.94
SHROOM3-205ENST00000481002 TAS2R45P59539 299 aa9.21□□□□□ -0.94
SHROOM3-205ENST00000481002 SAMD13Q5VXD3 122 aa9.21□□□□□ -0.94
SHROOM3-205ENST00000481002 SLC51BQ86UW2 128 aa9.21□□□□□ -0.94
SHROOM3-205ENST00000481002 MAP6D1Q9H9H5 199 aa9.21□□□□□ -0.94
SHROOM3-205ENST00000481002 PLA2G2EQ9NZK7 142 aa9.21□□□□□ -0.94
SHROOM3-205ENST00000481002 A8MZ25 164 aa9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 H3BQ15 152 aa9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 ISLRO14498 428 aa9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 HIST1H1EP10412 219 aaKnown RBP9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 ID1P41134 155 aa9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 CDC34P49427 236 aaPredicted RBP9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 PSMB3P49720 205 aa9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 GUK1Q16774 197 aa9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 KHDC3LQ587J8 217 aa9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 AKR1C8PQ5T2L2 129 aa9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 FAM122CQ6P4D5 195 aa9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 SAT2Q96F10 170 aaPredicted RBP9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 ZNF503Q96F45 646 aa9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 ACTR3CQ9C0K3 210 aaPredicted RBP9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 OR51M1Q9H341 326 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms