RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ANXA7P20073 488 aaKnown RBP8.28□□□□□ -1.08
CCM2-213ENST00000480658 HLA-DMBP28068 263 aa8.28□□□□□ -1.08
CCM2-213ENST00000480658 BTCP35070 178 aa8.28□□□□□ -1.08
CCM2-213ENST00000480658 RBMY1FQ15415 496 aaKnown RBP8.28□□□□□ -1.08
CCM2-213ENST00000480658 MZT2BQ6NZ67 158 aa8.28□□□□□ -1.08
CCM2-213ENST00000480658 LRRC20Q8TCA0 184 aa8.28□□□□□ -1.08
CCM2-213ENST00000480658 SHANK2-AS3Q9BTD1 123 aa8.28□□□□□ -1.08
CCM2-213ENST00000480658 RSG1Q9BU20 258 aa8.28□□□□□ -1.08
CCM2-213ENST00000480658 SLC25A39Q9BZJ4 359 aaPredicted RBP8.28□□□□□ -1.08
CCM2-213ENST00000480658 GSKIPQ9P0R6 139 aa8.28□□□□□ -1.08
CCM2-213ENST00000480658 A0A087X0K7 114 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 LINC00854A0A1B0GVQ3 168 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 DEDDO75618 318 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 INSP01308 110 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 OR5G3P0C626 314 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 P0DMU3 169 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 FAM231AP0DMU4 169 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 FAM231CP0DMU5 169 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 HBG1P69891 147 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 HBG2P69892 147 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 OXA1LQ15070 435 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 FAM78BQ5VT40 261 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 LCN15Q6UWW0 184 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 Q6ZRG5 221 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 SDHCQ99643 169 aaPredicted RBP8.27□□□□□ -1.09
CCM2-213ENST00000480658 SLC50A1Q9BRV3 221 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 TMEM208Q9BTX3 173 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 NDUFAF3Q9BU61 184 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 FLVCR2Q9UPI3 526 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 SACSQ9NZJ4 4579 aa8.27□□□□□ -1.09
CCM2-213ENST00000480658 ALMS1Q8TCU4 4167 aa8.26□□□□□ -1.09
CCM2-213ENST00000480658 DEFB131BA0A096LNP1 70 aa8.26□□□□□ -1.09
CCM2-213ENST00000480658 PMS2P5A8MQ11 134 aa8.26□□□□□ -1.09
CCM2-213ENST00000480658 A8MTW9 85 aa8.26□□□□□ -1.09
CCM2-213ENST00000480658 TCRBP04435 133 aa8.26□□□□□ -1.09
CCM2-213ENST00000480658 METTL15P1P0C7V9 234 aa8.26□□□□□ -1.09
CCM2-213ENST00000480658 RRN3P1Q2M238 152 aa8.26□□□□□ -1.09
CCM2-213ENST00000480658 Q6ZTC4 211 aa8.26□□□□□ -1.09
CCM2-213ENST00000480658 STX12Q86Y82 276 aa8.26□□□□□ -1.09
CCM2-213ENST00000480658 BPIFA4PQ86YQ2 179 aa8.26□□□□□ -1.09
CCM2-213ENST00000480658 TMEM256Q8N2U0 113 aa8.26□□□□□ -1.09
CCM2-213ENST00000480658 ZNF709Q8N972 641 aa8.26□□□□□ -1.09
CCM2-213ENST00000480658 ZNF431Q8TF32 576 aaPredicted RBP8.26□□□□□ -1.09
CCM2-213ENST00000480658 IGF2BP2-AS1Q96M15 143 aa8.26□□□□□ -1.09
CCM2-213ENST00000480658 PFDN5Q99471 154 aa8.26□□□□□ -1.09
CCM2-213ENST00000480658 NUDT15Q9NV35 164 aa8.26□□□□□ -1.09
CCM2-213ENST00000480658 RCL1Q9Y2P8 373 aaKnown RBP8.26□□□□□ -1.09
CCM2-213ENST00000480658 IGHV4-4A0A075B6R2 117 aa8.25□□□□□ -1.09
CCM2-213ENST00000480658 FAM240BA0A1B0GVZ2 78 aa8.25□□□□□ -1.09
CCM2-213ENST00000480658 C7orf66A4D0T2 115 aa8.25□□□□□ -1.09
CCM2-213ENST00000480658 C5orf51A6NDU8 294 aa8.25□□□□□ -1.09
CCM2-213ENST00000480658 CAV2P51636 162 aa8.25□□□□□ -1.09
CCM2-213ENST00000480658 RRAS2P62070 204 aaPredicted RBP8.25□□□□□ -1.09
CCM2-213ENST00000480658 GUK1Q16774 197 aa8.25□□□□□ -1.09
CCM2-213ENST00000480658 GDF5OSQ5U4N7 250 aa8.25□□□□□ -1.09
CCM2-213ENST00000480658 GSG1LQ6UXU4 331 aa8.25□□□□□ -1.09
CCM2-213ENST00000480658 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.25□□□□□ -1.09
CCM2-213ENST00000480658 ZNF738Q8NE65 137 aa8.25□□□□□ -1.09
CCM2-213ENST00000480658 OR1L4Q8NGR5 311 aa8.25□□□□□ -1.09
CCM2-213ENST00000480658 SCRT1Q9BWW7 348 aa8.25□□□□□ -1.09
CCM2-213ENST00000480658 ARL6Q9H0F7 186 aa8.25□□□□□ -1.09
CCM2-213ENST00000480658 ARV1Q9H2C2 271 aa8.25□□□□□ -1.09
CCM2-213ENST00000480658 GPN1Q9HCN4 374 aaPredicted RBP8.25□□□□□ -1.09
CCM2-213ENST00000480658 PPP1R14DQ9NXH3 145 aa8.25□□□□□ -1.09
CCM2-213ENST00000480658 IGHV3OR16-12A0A075B7B8 117 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 A6NHS1 94 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 FAM25EA8MYX2 175 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 AGPAT2O15120 278 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 COX7A2P2O60397 106 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 MPDU1O75352 247 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 IGKV3-20P01619 116 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 MBPP02686 304 aaPredicted RBP8.24□□□□□ -1.09
CCM2-213ENST00000480658 TSPOP30536 169 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 S100A11P31949 105 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 BCAP31P51572 246 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 FGL1Q08830 312 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 LINC00305Q7Z4B0 112 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 C12orf45Q8N5I9 185 aaPredicted RBP8.24□□□□□ -1.09
CCM2-213ENST00000480658 C2orf50Q96LR7 162 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 NIPSNAP3BQ9BS92 247 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 APLNQ9ULZ1 77 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 PXMP4Q9Y6I8 212 aa8.24□□□□□ -1.09
CCM2-213ENST00000480658 TRAV6A0A075B6T7 132 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 LOC102723971A0A1B0GUV8 181 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 LYRM9A8MSI8 78 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 BOLA2-SMG1P6H3BVE0 249 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 PLA2G10O15496 165 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 H2AFB2P0C5Z0 115 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 GATA2P23769 480 aaPredicted RBP8.23□□□□□ -1.09
CCM2-213ENST00000480658 CAMLGP49069 296 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 SULT1A1P50225 295 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 CNN1P51911 297 aaKnown RBP8.23□□□□□ -1.09
CCM2-213ENST00000480658 SLC38A11Q08AI6 406 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 ATP6V1FQ16864 119 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 C12orf74Q32Q52 190 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 C10orf113Q5VZT2 155 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 ENKURQ8TC29 256 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 C20orf144Q9BQM9 153 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 SLC35B3Q9H1N7 401 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 KCNIP2Q9NS61 270 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms