RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 DCANP1Q8TF63 244 aa9.12□□□□□ -0.95
TRA2B-212ENST00000480461 SH3BGRL3Q9H299 93 aa9.12□□□□□ -0.95
TRA2B-212ENST00000480461 SLC25A32Q9H2D1 315 aa9.12□□□□□ -0.95
TRA2B-212ENST00000480461 SEPSECSQ9HD40 501 aaKnown RBP9.12□□□□□ -0.95
TRA2B-212ENST00000480461 PLA2G2EQ9NZK7 142 aa9.12□□□□□ -0.95
TRA2B-212ENST00000480461 SORL1Q92673 2214 aa9.11□□□□□ -0.95
TRA2B-212ENST00000480461 ATP6V0CP27449 155 aa9.11□□□□□ -0.95
TRA2B-212ENST00000480461 RPL11P62913 178 aaKnown RBP9.11□□□□□ -0.95
TRA2B-212ENST00000480461 ZNF345Q14585 488 aa9.11□□□□□ -0.95
TRA2B-212ENST00000480461 C10orf113Q5VZT2 155 aa9.11□□□□□ -0.95
TRA2B-212ENST00000480461 Q6ZRG5 221 aa9.11□□□□□ -0.95
TRA2B-212ENST00000480461 TMUB2Q71RG4 321 aa9.11□□□□□ -0.95
TRA2B-212ENST00000480461 HSD17B11Q8NBQ5 300 aa9.11□□□□□ -0.95
TRA2B-212ENST00000480461 SPAG8Q99932 426 aaPredicted RBP9.11□□□□□ -0.95
TRA2B-212ENST00000480461 WFDC10AQ9H1F0 79 aa9.11□□□□□ -0.95
TRA2B-212ENST00000480461 SLC25A22Q9H936 323 aa9.11□□□□□ -0.95
TRA2B-212ENST00000480461 ELOA3CA0A087WX78 387 aaPredicted RBP9.1□□□□□ -0.95
TRA2B-212ENST00000480461 A0A0D9SG52 128 aa9.1□□□□□ -0.95
TRA2B-212ENST00000480461 C3orf84H3BNL1 204 aa9.1□□□□□ -0.95
TRA2B-212ENST00000480461 K7EQG2 157 aa9.1□□□□□ -0.95
TRA2B-212ENST00000480461 COX7A2P2O60397 106 aa9.1□□□□□ -0.95
TRA2B-212ENST00000480461 EIF3GO75821 320 aaKnown RBP eCLIP9.1□□□□□ -0.95
TRA2B-212ENST00000480461 SNRPCP09234 159 aaKnown RBP9.1□□□□□ -0.95
TRA2B-212ENST00000480461 FFAR4Q5NUL3 377 aa9.1□□□□□ -0.95
TRA2B-212ENST00000480461 SIGLEC15Q6ZMC9 328 aa9.1□□□□□ -0.95
TRA2B-212ENST00000480461 OR8I2Q8N0Y5 310 aa9.1□□□□□ -0.95
TRA2B-212ENST00000480461 ZNF709Q8N972 641 aa9.1□□□□□ -0.95
TRA2B-212ENST00000480461 PPP1R14BQ96C90 147 aa9.1□□□□□ -0.95
TRA2B-212ENST00000480461 GRAMD2BQ96HH9 432 aa9.1□□□□□ -0.95
TRA2B-212ENST00000480461 NARS2Q96I59 477 aaKnown RBP9.1□□□□□ -0.95
TRA2B-212ENST00000480461 FAM167A-AS1Q96KT0 104 aa9.1□□□□□ -0.95
TRA2B-212ENST00000480461 CITED4Q96RK1 184 aa9.1□□□□□ -0.95
TRA2B-212ENST00000480461 TMEM231Q9H6L2 316 aa9.1□□□□□ -0.95
TRA2B-212ENST00000480461 TAAR5O14804 337 aa9.09□□□□□ -0.95
TRA2B-212ENST00000480461 CD5P06127 495 aa9.09□□□□□ -0.95
TRA2B-212ENST00000480461 BMI1P35226 326 aa9.09□□□□□ -0.95
TRA2B-212ENST00000480461 ZNF266Q14584 549 aa9.09□□□□□ -0.95
TRA2B-212ENST00000480461 ZNF124Q15973 351 aa9.09□□□□□ -0.95
TRA2B-212ENST00000480461 ODF3L2Q3SX64 289 aa9.09□□□□□ -0.95
TRA2B-212ENST00000480461 MIR17HGQ75NE6 70 aa9.09□□□□□ -0.95
TRA2B-212ENST00000480461 STXBP6Q8NFX7 210 aa9.09□□□□□ -0.95
TRA2B-212ENST00000480461 GATAD1Q8WUU5 269 aa9.09□□□□□ -0.95
TRA2B-212ENST00000480461 HYLS1Q96M11 299 aa9.09□□□□□ -0.95
TRA2B-212ENST00000480461 ARPC5LQ9BPX5 153 aa9.09□□□□□ -0.95
TRA2B-212ENST00000480461 ZMAT5Q9UDW3 170 aaKnown RBP9.09□□□□□ -0.95
TRA2B-212ENST00000480461 UBQLN2Q9UHD9 624 aa9.09□□□□□ -0.95
TRA2B-212ENST00000480461 TIMM9Q9Y5J7 89 aa9.09□□□□□ -0.95
TRA2B-212ENST00000480461 U3KQK5 164 aa9.09□□□□□ -0.95
TRA2B-212ENST00000480461 HELTA6NFD8 242 aa9.08□□□□□ -0.96
TRA2B-212ENST00000480461 C17orf112F2Z3M2 114 aa9.08□□□□□ -0.96
TRA2B-212ENST00000480461 H3BQ15 152 aa9.08□□□□□ -0.96
TRA2B-212ENST00000480461 SOCS3O14543 225 aa9.08□□□□□ -0.96
TRA2B-212ENST00000480461 JTBO76095 146 aa9.08□□□□□ -0.96
TRA2B-212ENST00000480461 NKX2-5P52952 324 aaPredicted RBP9.08□□□□□ -0.96
TRA2B-212ENST00000480461 CD81P60033 236 aa9.08□□□□□ -0.96
TRA2B-212ENST00000480461 RAB2AP61019 212 aa9.08□□□□□ -0.96
TRA2B-212ENST00000480461 FAM78BQ5VT40 261 aa9.08□□□□□ -0.96
TRA2B-212ENST00000480461 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.08□□□□□ -0.96
TRA2B-212ENST00000480461 C9orf62Q8N4C0 152 aa9.08□□□□□ -0.96
TRA2B-212ENST00000480461 RPP25LQ8N5L8 163 aaKnown RBP9.08□□□□□ -0.96
TRA2B-212ENST00000480461 DEFB125Q8N687 156 aa9.08□□□□□ -0.96
TRA2B-212ENST00000480461 OR1L4Q8NGR5 311 aa9.08□□□□□ -0.96
TRA2B-212ENST00000480461 ZNF503Q96F45 646 aa9.08□□□□□ -0.96
TRA2B-212ENST00000480461 PSMG3Q9BT73 122 aaPredicted RBP9.08□□□□□ -0.96
TRA2B-212ENST00000480461 PFDN2Q9UHV9 154 aa9.08□□□□□ -0.96
TRA2B-212ENST00000480461 BORCS7-ASMTA0A0B4J1R7 106 aa9.07□□□□□ -0.96
TRA2B-212ENST00000480461 TRAV2A0A0B4J234 112 aa9.07□□□□□ -0.96
TRA2B-212ENST00000480461 TRAV8-2A0A0B4J237 113 aa9.07□□□□□ -0.96
TRA2B-212ENST00000480461 DNASE2O00115 360 aaPredicted RBP9.07□□□□□ -0.96
TRA2B-212ENST00000480461 BCL2L11O43521 198 aa9.07□□□□□ -0.96
TRA2B-212ENST00000480461 IGFL4Q6B9Z1 124 aa9.07□□□□□ -0.96
TRA2B-212ENST00000480461 APRG1Q8IVJ8 170 aa9.07□□□□□ -0.96
TRA2B-212ENST00000480461 OR2G3Q8NGZ4 309 aa9.07□□□□□ -0.96
TRA2B-212ENST00000480461 PFDN5Q99471 154 aa9.07□□□□□ -0.96
TRA2B-212ENST00000480461 SLC25A2Q9BXI2 301 aa9.07□□□□□ -0.96
TRA2B-212ENST00000480461 NRN1Q9NPD7 142 aa9.07□□□□□ -0.96
TRA2B-212ENST00000480461 RPRMQ9NS64 109 aa9.07□□□□□ -0.96
TRA2B-212ENST00000480461 OR4C46A6NHA9 309 aa9.06□□□□□ -0.96
TRA2B-212ENST00000480461 OR11H12B2RN74 326 aa9.06□□□□□ -0.96
TRA2B-212ENST00000480461 H3BTX0 84 aa9.06□□□□□ -0.96
TRA2B-212ENST00000480461 NHLRC4P0CG21 123 aaPredicted RBP9.06□□□□□ -0.96
TRA2B-212ENST00000480461 IGLC2P0DOY2 106 aa9.06□□□□□ -0.96
TRA2B-212ENST00000480461 IGHV4-30-4P0DP06 118 aa9.06□□□□□ -0.96
TRA2B-212ENST00000480461 SPP1P10451 314 aa9.06□□□□□ -0.96
TRA2B-212ENST00000480461 M6PRP20645 277 aa9.06□□□□□ -0.96
TRA2B-212ENST00000480461 DEFB1P60022 68 aa9.06□□□□□ -0.96
TRA2B-212ENST00000480461 PAFAH1B2P68402 229 aa9.06□□□□□ -0.96
TRA2B-212ENST00000480461 ZFP69Q49AA0 526 aa9.06□□□□□ -0.96
TRA2B-212ENST00000480461 CASC10Q5T4H9 136 aa9.06□□□□□ -0.96
TRA2B-212ENST00000480461 SAT2Q96F10 170 aaPredicted RBP9.06□□□□□ -0.96
TRA2B-212ENST00000480461 C20orf173Q96LM9 149 aa9.06□□□□□ -0.96
TRA2B-212ENST00000480461 MAP6D1Q9H9H5 199 aa9.06□□□□□ -0.96
TRA2B-212ENST00000480461 ZNF586Q9NXT0 402 aa9.06□□□□□ -0.96
TRA2B-212ENST00000480461 FUT9Q9Y231 359 aa9.06□□□□□ -0.96
TRA2B-212ENST00000480461 RBMY1BA6NDE4 496 aaKnown RBP9.05□□□□□ -0.96
TRA2B-212ENST00000480461 RBMY1EA6NEQ0 496 aaKnown RBP9.05□□□□□ -0.96
TRA2B-212ENST00000480461 RBMY1DP0C7P1 496 aaKnown RBP9.05□□□□□ -0.96
TRA2B-212ENST00000480461 ZNF688P0C7X2 276 aa9.05□□□□□ -0.96
TRA2B-212ENST00000480461 PYYP10082 97 aa9.05□□□□□ -0.96
TRA2B-212ENST00000480461 PRB4P10163 310 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 748.8 ms