RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 SH2D1AO60880 128 aa11.14□□□□□ -0.63
MCF2L-225ENST00000480321 NDUFS6O75380 124 aaKnown RBP11.14□□□□□ -0.63
MCF2L-225ENST00000480321 ZNF329Q86UD4 541 aa11.14□□□□□ -0.63
MCF2L-225ENST00000480321 TET1Q8NFU7 2136 aa11.14□□□□□ -0.63
MCF2L-225ENST00000480321 CD33P20138 364 aa11.14□□□□□ -0.63
MCF2L-225ENST00000480321 GNLYP22749 145 aa11.14□□□□□ -0.63
MCF2L-225ENST00000480321 VCYO14598 125 aa11.14□□□□□ -0.63
MCF2L-225ENST00000480321 MLNRO43193 412 aa11.14□□□□□ -0.63
MCF2L-225ENST00000480321 SAP30O75446 220 aa11.14□□□□□ -0.63
MCF2L-225ENST00000480321 PRTN3P24158 256 aa11.14□□□□□ -0.63
MCF2L-225ENST00000480321 ZNF664Q8N3J9 261 aa11.14□□□□□ -0.63
MCF2L-225ENST00000480321 IGHV3-64A0A075B6Q5 118 aa11.13□□□□□ -0.63
MCF2L-225ENST00000480321 B3GALT5-AS1P59052 145 aa11.13□□□□□ -0.63
MCF2L-225ENST00000480321 C10orf91Q5T1B1 145 aa11.13□□□□□ -0.63
MCF2L-225ENST00000480321 DTX1Q86Y01 620 aa11.13□□□□□ -0.63
MCF2L-225ENST00000480321 NCOR1P1Q9H4R4 102 aa11.13□□□□□ -0.63
MCF2L-225ENST00000480321 SPANXA1Q9NS26 97 aa11.13□□□□□ -0.63
MCF2L-225ENST00000480321 IGKV2-40A0A087WW87 121 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-225ENST00000480321 LINC00473A8K010 186 aa11.13□□□□□ -0.63
MCF2L-225ENST00000480321 IGKV2D-40P01614 121 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-225ENST00000480321 GAFA1Q96PS6 74 aa11.13□□□□□ -0.63
MCF2L-225ENST00000480321 PPIFP30405 207 aaKnown RBP11.13□□□□□ -0.63
MCF2L-225ENST00000480321 DLX4Q92988 240 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-225ENST00000480321 PLXNA3P51805 1871 aa11.13□□□□□ -0.63
MCF2L-225ENST00000480321 DOCK6Q96HP0 2047 aa11.13□□□□□ -0.63
MCF2L-225ENST00000480321 GGTLC3B5MD39 225 aa11.13□□□□□ -0.63
MCF2L-225ENST00000480321 ETV2O00321 342 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-225ENST00000480321 RNASE2P10153 161 aaKnown RBP11.13□□□□□ -0.63
MCF2L-225ENST00000480321 FOXG1P55316 489 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-225ENST00000480321 EXOC3-AS1Q8N2X6 119 aa11.13□□□□□ -0.63
MCF2L-225ENST00000480321 CD300EQ496F6 205 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-225ENST00000480321 TRAV3A0A0B4J244 114 aa11.12□□□□□ -0.63
MCF2L-225ENST00000480321 TMEM219Q86XT9 240 aa11.12□□□□□ -0.63
MCF2L-225ENST00000480321 CST9LQ9H4G1 147 aa11.12□□□□□ -0.63
MCF2L-225ENST00000480321 C20orf204Q6ZNR8 217 aa11.12□□□□□ -0.63
MCF2L-225ENST00000480321 MDS2Q8NDY4 140 aa11.12□□□□□ -0.63
MCF2L-225ENST00000480321 ESDP10768 282 aa11.12□□□□□ -0.63
MCF2L-225ENST00000480321 C5orf64Q2M2E5 130 aa11.12□□□□□ -0.63
MCF2L-225ENST00000480321 C15orf32Q32M92 178 aa11.12□□□□□ -0.63
MCF2L-225ENST00000480321 C10orf55Q5SWW7 151 aa11.12□□□□□ -0.63
MCF2L-225ENST00000480321 Q86TA4 180 aa11.12□□□□□ -0.63
MCF2L-225ENST00000480321 RFNGQ9Y644 331 aa11.11□□□□□ -0.63
MCF2L-225ENST00000480321 ADARB2-AS1A8MUL3 147 aa11.11□□□□□ -0.63
MCF2L-225ENST00000480321 KIF26BQ2KJY2 2108 aa11.11□□□□□ -0.63
MCF2L-225ENST00000480321 C3orf56Q8N813 242 aa11.11□□□□□ -0.63
MCF2L-225ENST00000480321 RALGAPA1Q6GYQ0 2036 aa11.11□□□□□ -0.63
MCF2L-225ENST00000480321 NCOR1O75376 2440 aa11.11□□□□□ -0.63
MCF2L-225ENST00000480321 FAM223BA6NKX1 122 aa11.11□□□□□ -0.63
MCF2L-225ENST00000480321 A8MWP6 167 aa11.11□□□□□ -0.63
MCF2L-225ENST00000480321 KLRD1Q13241 179 aa11.11□□□□□ -0.63
MCF2L-225ENST00000480321 S100A7L2Q5SY68 101 aa11.11□□□□□ -0.63
MCF2L-225ENST00000480321 FAM223AQ8IWN6 122 aa11.11□□□□□ -0.63
MCF2L-225ENST00000480321 USMG5Q96IX5 58 aa11.11□□□□□ -0.63
MCF2L-225ENST00000480321 SIGLEC9Q9Y336 463 aa11.11□□□□□ -0.63
MCF2L-225ENST00000480321 DMRTC2Q8IXT2 367 aaPredicted RBP11.11□□□□□ -0.63
MCF2L-225ENST00000480321 PFN1P07737 140 aaKnown RBP11.1□□□□□ -0.63
MCF2L-225ENST00000480321 RASL10AQ92737 203 aa11.1□□□□□ -0.63
MCF2L-225ENST00000480321 A0A0G2JRQ6 117 aa11.1□□□□□ -0.63
MCF2L-225ENST00000480321 MBD3L4A6NDZ8 208 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-225ENST00000480321 MBD3L3A6NE82 208 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-225ENST00000480321 MBD3L5A6NJ08 208 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-225ENST00000480321 SELLP14151 372 aa11.1□□□□□ -0.63
MCF2L-225ENST00000480321 MPV17L2Q567V2 206 aa11.1□□□□□ -0.63
MCF2L-225ENST00000480321 TMEM75Q8N9X5 138 aa11.1□□□□□ -0.63
MCF2L-225ENST00000480321 MBD3L2Q8NHZ7 208 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-225ENST00000480321 B4DSR2 109 aa11.1□□□□□ -0.63
MCF2L-225ENST00000480321 BUB1B-PAK6H3BSN5 160 aa11.1□□□□□ -0.63
MCF2L-225ENST00000480321 IGHG3P01860 377 aa11.1□□□□□ -0.63
MCF2L-225ENST00000480321 NPC2P61916 151 aa11.1□□□□□ -0.63
MCF2L-225ENST00000480321 HIST1H4AP62805 103 aaKnown RBP11.1□□□□□ -0.63
MCF2L-225ENST00000480321 UNQ6494/PRO21346Q6UXR6 183 aa11.1□□□□□ -0.63
MCF2L-225ENST00000480321 hDV102S1A0JD36 115 aa11.1□□□□□ -0.63
MCF2L-225ENST00000480321 C5orf63A6NC05 138 aa11.1□□□□□ -0.63
MCF2L-225ENST00000480321 TMEM8BA6NDV4 472 aa11.1□□□□□ -0.63
MCF2L-225ENST00000480321 SSBP2P81877 361 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-225ENST00000480321 MAJINQ3KP22 176 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 PRR31Q5SQ13 230 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 LCN12Q6JVE5 192 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 SHANK2-AS3Q9BTD1 123 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 JPT2Q9H910 190 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 IGKV1D-17A0A075B6S4 117 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 NCR2O95944 276 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 ZNF562Q6V9R5 426 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 TEX43Q6ZNM6 134 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 TRAV8-1A0A0A6YYK1 113 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 LMO1P25800 156 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 KIR3DS1Q14943 382 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 CADP27708 2225 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 OCIAD2Q56VL3 154 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 GTSF1LQ9H1H1 148 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 COX11Q9Y6N1 276 aa11.09□□□□□ -0.63
MCF2L-225ENST00000480321 A0A0G2JNJ9 132 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 LGALS1P09382 135 aaKnown RBP11.08□□□□□ -0.64
MCF2L-225ENST00000480321 Q6ZRM9 215 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 RNF144BQ7Z419 303 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 Q9UFV3 132 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 CACNA1EQ15878 2313 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 PRB4P10163 310 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-225ENST00000480321 LILRA1O75019 489 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 LINC00158P58513 81 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms