RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 PRSS29PA6NIE9 313 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 ZNF98A6NK75 572 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 F6UB75 175 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 COX7A2P2O60397 106 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 AMBPP02760 352 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 GIG44P09565 113 aaPredicted RBP5.1□□□□□ -1.59
COL17A1-205ENST00000480127 LINC00869P0C866 280 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 DEFB130BP0DP73 79 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 DEFB130AP0DP74 79 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 SLC25A6P12236 298 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 RPL7P18124 248 aaKnown RBP5.1□□□□□ -1.59
COL17A1-205ENST00000480127 DEFB1P60022 68 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 UBE2MP61081 183 aaKnown RBP5.1□□□□□ -1.59
COL17A1-205ENST00000480127 RAB31Q13636 194 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 C12orf74Q32Q52 190 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 GDF5OSQ5U4N7 250 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 OR10P1Q8NGE3 313 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 TMEM170AQ8WVE7 144 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 DEDD2Q8WXF8 326 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 DNAH6Q9C0G6 4158 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 SLC35B3Q9H1N7 401 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 SLC25A32Q9H2D1 315 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 BOLA1Q9Y3E2 137 aa5.1□□□□□ -1.59
COL17A1-205ENST00000480127 DNAH2Q9P225 4427 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 IGLV2-18A0A075B6J9 118 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 A0A0J9YX75 114 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 C5orf51A6NDU8 294 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 M0R2Z0 102 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 ADAP1O75689 374 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 GATA2P23769 480 aaPredicted RBP5.09□□□□□ -1.59
COL17A1-205ENST00000480127 SELENOTP62341 195 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 POLR2GP62487 172 aaKnown RBP eCLIP5.09□□□□□ -1.59
COL17A1-205ENST00000480127 CLINT1Q14677 625 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 SPINK13Q1W4C9 94 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 IAH1Q2TAA2 248 aaPredicted RBP5.09□□□□□ -1.59
COL17A1-205ENST00000480127 CYP2G1PQ6ZSU1 146 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 RNF182Q8N6D2 247 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 POM121L12Q8N7R1 296 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 LINC01587Q99440 93 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 SCRT1Q9BWW7 348 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 ARL6Q9H0F7 186 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 SLC45A2Q9UMX9 530 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 YTHDF2Q9Y5A9 579 aaKnown RBP5.09□□□□□ -1.59
COL17A1-205ENST00000480127 DNAH17Q9UFH2 4485 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 MUC4Q99102 2169 aa5.09□□□□□ -1.59
COL17A1-205ENST00000480127 DNAH11Q96DT5 4516 aa5.09□□□□□ -1.6
COL17A1-205ENST00000480127 DYNC1H1Q14204 4646 aaKnown RBP5.08□□□□□ -1.6
COL17A1-205ENST00000480127 PKHD1P08F94 4074 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 C9orf170A2RU37 121 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 F5H768 121 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 NUDT3O95989 172 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 METTL15P1P0C7V9 234 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 ZNF705DP0CH99 300 aaPredicted RBP5.08□□□□□ -1.6
COL17A1-205ENST00000480127 ZNF705BP0CI00 300 aaPredicted RBP5.08□□□□□ -1.6
COL17A1-205ENST00000480127 PVALBP20472 110 aaPredicted RBP5.08□□□□□ -1.6
COL17A1-205ENST00000480127 CAV2P51636 162 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 CNN1P51911 297 aaKnown RBP5.08□□□□□ -1.6
COL17A1-205ENST00000480127 S100A10P60903 97 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 B2MP61769 119 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 IGFL4Q6B9Z1 124 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 TEPPQ6URK8 271 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 TMEM144Q7Z5S9 345 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 ZNF546Q86UE3 836 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 CCDC190Q86UF4 302 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 ZNF575Q86XF7 245 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 CCDC28AQ8IWP9 274 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 BAP18Q8IXM2 172 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 LRTM2Q8N967 370 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 THAP8Q8NA92 274 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 CSNK1G2-AS1Q8NCQ2 148 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 OR4D5Q8NGN0 318 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 OR10J6PQ8NGY7 276 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 TRIM63Q969Q1 353 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 FAM210BQ96KR6 192 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 IGF2BP2-AS1Q96M15 143 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 NEU1Q99519 415 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 SLC25A39Q9BZJ4 359 aaPredicted RBP5.08□□□□□ -1.6
COL17A1-205ENST00000480127 DKK2Q9UBU2 259 aa5.08□□□□□ -1.6
COL17A1-205ENST00000480127 LSM5Q9Y4Y9 91 aaKnown RBP5.08□□□□□ -1.6
COL17A1-205ENST00000480127 IGKV1D-37A0A075B6S9 117 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 TRAV12-2A0A075B6T6 113 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 ZNF705GA8MUZ8 300 aaPredicted RBP5.07□□□□□ -1.6
COL17A1-205ENST00000480127 ZNF705FA8MVS1 300 aaPredicted RBP5.07□□□□□ -1.6
COL17A1-205ENST00000480127 BOLA2-SMG1P6H3BVE0 249 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 J3KRW8 73 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 PITX3O75364 302 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 NDUFB6O95139 128 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 OR4E1P0C645 316 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 TSPOP30536 169 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 OXA1LQ15070 435 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 ZNF79Q15937 498 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 ZNF705AQ6ZN79 300 aaPredicted RBP5.07□□□□□ -1.6
COL17A1-205ENST00000480127 Q6ZRG5 221 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 BPIFA4PQ86YQ2 179 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 UHRF2Q96PU4 802 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 SHANK2-AS3Q9BTD1 123 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 NPVFQ9HCQ7 196 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 FLVCR2Q9UPI3 526 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 V9GYH0 126 aa5.07□□□□□ -1.6
COL17A1-205ENST00000480127 PKD1P98161 4303 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms