RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 FAM90A2PQ658T7 463 aa9.48□□□□□ -0.89
TRAPPC12-218ENST00000479897 FAM167A-AS1Q96KT0 104 aa9.48□□□□□ -0.89
TRAPPC12-218ENST00000479897 TMEM14CQ9P0S9 112 aa9.48□□□□□ -0.89
TRAPPC12-218ENST00000479897 NOTCH3Q9UM47 2321 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 IGHV3OR16-13A0A075B7E8 117 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 IGHV3-49A0A0A0MS15 119 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 IGHV3-74A0A0B4J1X5 117 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 TRAV25A0A0B4J276 109 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 HELTA6NFD8 242 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 MRPS12O15235 138 aaKnown RBP9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 STAG3L2P0CL84 134 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 STAG3L3P0CL85 134 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 GP9P14770 177 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 TAS2R45P59539 299 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 DEFB114Q30KQ6 69 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 KHDC3LQ587J8 217 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 SPATA31B1PQ5VZV4 182 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 FAM122CQ6P4D5 195 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 TEX261Q6UWH6 196 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 SIGLEC15Q6ZMC9 328 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 PQLC2Q6ZP29 291 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 MIR17HGQ75NE6 70 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 BPIFA4PQ86YQ2 179 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 STXBP6Q8NFX7 210 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 DYNLRB2Q8TF09 96 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 SLC25A2Q9BXI2 301 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 ACTR3CQ9C0K3 210 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 SLC25A22Q9H936 323 aa9.47□□□□□ -0.89
TRAPPC12-218ENST00000479897 A0A087X0K7 114 aa9.46□□□□□ -0.9
TRAPPC12-218ENST00000479897 A0A1W2PPV4 95 aa9.46□□□□□ -0.9
TRAPPC12-218ENST00000479897 TSPAN4O14817 238 aa9.46□□□□□ -0.9
TRAPPC12-218ENST00000479897 GALR1P47211 349 aa9.46□□□□□ -0.9
TRAPPC12-218ENST00000479897 MEOX2P50222 304 aa9.46□□□□□ -0.9
TRAPPC12-218ENST00000479897 ZNF726P1Q15940 193 aa9.46□□□□□ -0.9
TRAPPC12-218ENST00000479897 LEMD1Q68G75 181 aa9.46□□□□□ -0.9
TRAPPC12-218ENST00000479897 ALKAL2Q6UX46 152 aa9.46□□□□□ -0.9
TRAPPC12-218ENST00000479897 OR8I2Q8N0Y5 310 aa9.46□□□□□ -0.9
TRAPPC12-218ENST00000479897 RAB24Q969Q5 203 aa9.46□□□□□ -0.9
TRAPPC12-218ENST00000479897 TRAV2A0A0B4J234 112 aa9.45□□□□□ -0.9
TRAPPC12-218ENST00000479897 TRAV5A0A0B4J249 113 aa9.45□□□□□ -0.9
TRAPPC12-218ENST00000479897 IGHV3-66A0A0C4DH42 116 aa9.45□□□□□ -0.9
TRAPPC12-218ENST00000479897 IGLC2P0DOY2 106 aa9.45□□□□□ -0.9
TRAPPC12-218ENST00000479897 CD300EQ496F6 205 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC12-218ENST00000479897 LCN12Q6JVE5 192 aa9.45□□□□□ -0.9
TRAPPC12-218ENST00000479897 SSX7Q7RTT5 188 aa9.45□□□□□ -0.9
TRAPPC12-218ENST00000479897 TCF24Q7RTU0 167 aa9.45□□□□□ -0.9
TRAPPC12-218ENST00000479897 TMEM61Q8N0U2 210 aa9.45□□□□□ -0.9
TRAPPC12-218ENST00000479897 RNF141Q8WVD5 230 aa9.45□□□□□ -0.9
TRAPPC12-218ENST00000479897 MBD3L1Q8WWY6 194 aa9.45□□□□□ -0.9
TRAPPC12-218ENST00000479897 DNHD1Q96M86 4753 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 MAP1LC3B2A6NCE7 125 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 IFNA7P01567 189 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 IGLL1P15814 213 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 FHITP49789 147 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 PDE6HQ13956 83 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 FAM74A1Q5RGS3 127 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 SAMD13Q5VXD3 122 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 ZNF680Q8NEM1 530 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 FAM213BQ8TBF2 198 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 LRRC20Q8TCA0 184 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 ZNF503Q96F45 646 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 C17orf77Q96MU5 243 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 SPAG8Q99932 426 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 MAP1LC3BQ9GZQ8 125 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 HRH4Q9H3N8 390 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 NRN1Q9NPD7 142 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 SMAD5-AS1Q9Y6J3 95 aa9.44□□□□□ -0.9
TRAPPC12-218ENST00000479897 TRAV1-1A0A0B4J248 108 aa9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 OR7C2O60412 319 aa9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 ZNF253O75346 499 aa9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 CXorf1O96002 111 aa9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 ARL14EPLP0DKL9 152 aa9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 HIST1H1EP10412 219 aaKnown RBP9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 ATF4P18848 351 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 GUK1Q16774 197 aa9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 LCN15Q6UWW0 184 aa9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 RBPMS2Q6ZRY4 209 aaKnown RBP9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 SUN5Q8TC36 379 aa9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 DCANP1Q8TF63 244 aa9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 FXYD5Q96DB9 178 aa9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 SAT2Q96F10 170 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 PAXXQ9BUH6 204 aa9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 OR51M1Q9H341 326 aa9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 PKD1L1Q8TDX9 2849 aa9.43□□□□□ -0.9
TRAPPC12-218ENST00000479897 SORL1Q92673 2214 aa9.42□□□□□ -0.9
TRAPPC12-218ENST00000479897 SOCS3O14543 225 aa9.42□□□□□ -0.9
TRAPPC12-218ENST00000479897 H2AFB1P0C5Y9 115 aa9.42□□□□□ -0.9
TRAPPC12-218ENST00000479897 PYYP10082 97 aa9.42□□□□□ -0.9
TRAPPC12-218ENST00000479897 UBE2L3P68036 154 aaKnown RBP9.42□□□□□ -0.9
TRAPPC12-218ENST00000479897 EGFEM1PQ0D2K5 195 aa9.42□□□□□ -0.9
TRAPPC12-218ENST00000479897 SAMD5Q5TGI4 173 aa9.42□□□□□ -0.9
TRAPPC12-218ENST00000479897 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.42□□□□□ -0.9
TRAPPC12-218ENST00000479897 ZNF767PQ75MW2 155 aa9.42□□□□□ -0.9
TRAPPC12-218ENST00000479897 MS4A6AQ9H2W1 248 aa9.42□□□□□ -0.9
TRAPPC12-218ENST00000479897 TMEM167BQ9NRX6 74 aa9.42□□□□□ -0.9
TRAPPC12-218ENST00000479897 UBQLN2Q9UHD9 624 aa9.42□□□□□ -0.9
TRAPPC12-218ENST00000479897 MGAM2Q2M2H8 2515 aa9.41□□□□□ -0.9
TRAPPC12-218ENST00000479897 TRBV19A0A075B6N1 114 aa9.41□□□□□ -0.9
TRAPPC12-218ENST00000479897 IZUMO1RA6ND01 250 aa9.41□□□□□ -0.9
TRAPPC12-218ENST00000479897 OR4C46A6NHA9 309 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms