RNA–Protein interactions for RNA: ENST00000479635.1

VSIG1-204, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

TSL 3

Gene VSIG1, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-204ENST00000479635 POP5Q969H6 163 aaKnown RBP-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 BORCS7Q96B45 105 aa-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 CCDC42Q96M95 316 aa-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 LYSMD1Q96S90 227 aa-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 NABP2Q9BQ15 211 aa-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 CMSS1Q9BQ75 279 aaKnown RBP-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 LINC00467Q9BRT7 94 aa-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 GGACTQ9BVM4 153 aa-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 TMEM138Q9NPI0 162 aa-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 TVP23BQ9NYZ1 205 aa-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 GLTPQ9NZD2 209 aa-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 LY96Q9Y6Y9 160 aa-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 FANCMQ8IYD8 2048 aa-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 BCORL1Q5H9F3 1711 aa-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 HRNRQ86YZ3 2850 aaPredicted RBP-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 KDM6AO15550 1401 aaPredicted RBP-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 MIA2Q96PC5 1412 aa-0.04□□□□□ -2.42
VSIG1-204ENST00000479635 SCN8AQ9UQD0 1980 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 RFX7Q2KHR2 1363 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 HIVEP3Q5T1R4 2406 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 HMCN2Q8NDA2 5059 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 COL7A1Q02388 2944 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 NAV3Q8IVL0 2385 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 UNC79Q9P2D8 2635 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 TRAV23DV6A0A075B6W5 121 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 A0A087WSZ3 146 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 TRGV10A0A0A0MS01 117 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 TRBV30A0A0K0K1B3 111 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 A8MWV9 139 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 C5orf67F2Z3F1 127 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 J3QRK9 145 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 TMEM256-PLSCR3K7ERE1 68 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 M0R233 179 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 TAX1BP3O14907 124 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 CST8O60676 142 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 NIPSNAP2O75323 286 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 RPP14O95059 124 aaKnown RBP-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 HAND1O96004 215 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 CXCL8P10145 99 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 KDELR1P24390 212 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 ERP29P30040 261 aaKnown RBP-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 ATP5G3P48201 142 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 UBE2BP63146 152 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 HIST1H3AP68431 136 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 H3F3AP84243 136 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 CDK6Q00534 326 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 ITGB3BPQ13352 177 aaPredicted RBP-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 SPATA45Q537H7 98 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 TMEM97Q5BJF2 176 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 LYRM7Q5U5X0 104 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 PTRHD1Q6GMV3 140 aaKnown RBP-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 PATE2Q6UY27 113 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 Q6ZS92 163 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 Q86TA4 180 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 OTUD6BQ8N6M0 293 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 OR5D16Q8NGK9 328 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 CANT1Q8WVQ1 401 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 PLAC4Q8WY50 150 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 RAB37Q96AX2 223 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 MUCL1Q96DR8 90 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 PRAP1Q96NZ9 151 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 CCL19Q99731 98 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 SLC25A21Q9BQT8 299 aaPredicted RBP-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 KIFC1Q9BW19 673 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 CCDC94Q9BW85 323 aaPredicted RBP-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 NPCDR1Q9BY65 106 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 TRIM4Q9C037 500 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 PBOV1Q9GZY1 135 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 PARVBQ9HBI1 364 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 MED29Q9NX70 200 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 OR52A1Q9UKL2 312 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 PLB1Q6P1J6 1458 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 CEP164Q9UPV0 1460 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 FMN1Q68DA7 1419 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 ERBINQ96RT1 1412 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 CELSR1Q9NYQ6 3014 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 TRPM1Q7Z4N2 1603 aa-0.05□□□□□ -2.42
VSIG1-204ENST00000479635 BSNQ9UPA5 3926 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 ZNF462Q96JM2 2506 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 PCF11O94913 1555 aaKnown RBP-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 TRBV19A0A075B6N1 114 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 C9orf170A2RU37 121 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 FAM159BA6NKW6 160 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 SMIM23A6NLE4 172 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 ZNF727A8MUV8 499 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 C17orf112F2Z3M2 114 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 K7ERJ3 54 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 HMGB3O15347 200 aaKnown RBP-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 OR7C1O76099 320 aaPredicted RBP-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 LY6G6CO95867 125 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 CRHP06850 196 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 CCL4P13236 92 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 CYBAP13498 195 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 HLA-EP13747 358 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 CDKN2CP42773 168 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 RAB5CP51148 216 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 INSL3P51460 131 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 DYNLT3P51808 116 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 FXYD4P59646 89 aa-0.06□□□□□ -2.42
VSIG1-204ENST00000479635 MYL6P60660 151 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms