RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 GAGE7O76087 117 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 GAGE12FP0CL80 117 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 GAGE12GP0CL81 117 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 GAGE12IP0CL82 117 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 UCP1P25874 307 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 RCVRNP35243 200 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 TGFBR1P36897 503 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 B2MP61769 119 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 AARDQ4LEZ3 155 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 C1orf194Q5T5A4 169 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 ETFRF1Q6IPR1 90 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 SAMD12Q8N8I0 201 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 LHFPL5Q8TAF8 219 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 GPX8Q8TED1 209 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 SLC25A22Q9H936 323 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 CACNG5Q9UF02 275 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 A0A096LPF7 62 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 ATG12O94817 140 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 DUSP14O95147 198 aaKnown RBP6.59□□□□□ -1.35
GPNMB-211ENST00000479625 MEOX2P50222 304 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 TAS2R60P59551 318 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 MEF2DQ14814 521 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 NMSQ5H8A3 153 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 SERTAD4-AS1Q5TG53 156 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 TMEM144Q7Z5S9 345 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 GPR141Q7Z602 305 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 LHFPL1Q86WI0 220 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 SNX29P2Q8IUI4 249 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 LINC00612Q8N6U2 182 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 OR10J6PQ8NGY7 276 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 OR52E5Q8NH55 327 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 TMEM263Q8WUH6 116 aaKnown RBP6.59□□□□□ -1.35
GPNMB-211ENST00000479625 RSG1Q9BU20 258 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 TMPRSS5Q9H3S3 457 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 PFDN2Q9UHV9 154 aa6.59□□□□□ -1.35
GPNMB-211ENST00000479625 NXPH4O95158 308 aa6.58□□□□□ -1.36
GPNMB-211ENST00000479625 ZNF182P17025 639 aaPredicted RBP6.58□□□□□ -1.36
GPNMB-211ENST00000479625 GALR1P47211 349 aa6.58□□□□□ -1.36
GPNMB-211ENST00000479625 GABARAPL2P60520 117 aa6.58□□□□□ -1.36
GPNMB-211ENST00000479625 HIST1H1AQ02539 215 aaPredicted RBP6.58□□□□□ -1.36
GPNMB-211ENST00000479625 KLF9Q13886 244 aaPredicted RBP6.58□□□□□ -1.36
GPNMB-211ENST00000479625 GAMTQ14353 236 aa6.58□□□□□ -1.36
GPNMB-211ENST00000479625 SAMD13Q5VXD3 122 aa6.58□□□□□ -1.36
GPNMB-211ENST00000479625 TMEM256Q8N2U0 113 aa6.58□□□□□ -1.36
GPNMB-211ENST00000479625 ZNF738Q8NE65 137 aa6.58□□□□□ -1.36
GPNMB-211ENST00000479625 ZNF486Q96H40 463 aaPredicted RBP6.58□□□□□ -1.36
GPNMB-211ENST00000479625 VSIG2Q96IQ7 327 aa6.58□□□□□ -1.36
GPNMB-211ENST00000479625 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.58□□□□□ -1.36
GPNMB-211ENST00000479625 H3BNG1 76 aa6.57□□□□□ -1.36
GPNMB-211ENST00000479625 OR5AC1P0C628 307 aa6.57□□□□□ -1.36
GPNMB-211ENST00000479625 RHOBP62745 196 aa6.57□□□□□ -1.36
GPNMB-211ENST00000479625 FGL1Q08830 312 aa6.57□□□□□ -1.36
GPNMB-211ENST00000479625 OR13C8Q8NGS7 320 aa6.57□□□□□ -1.36
GPNMB-211ENST00000479625 TMEM70Q9BUB7 260 aa6.57□□□□□ -1.36
GPNMB-211ENST00000479625 PARD6GQ9BYG4 376 aaPredicted RBP6.57□□□□□ -1.36
GPNMB-211ENST00000479625 FAM30AQ9NZY2 134 aa6.57□□□□□ -1.36
GPNMB-211ENST00000479625 COPZ2Q9P299 210 aa6.57□□□□□ -1.36
GPNMB-211ENST00000479625 IGKV1OR2-108A0A075B7D4 117 aa6.56□□□□□ -1.36
GPNMB-211ENST00000479625 IGLV5-52A0A0A0MRZ9 124 aa6.56□□□□□ -1.36
GPNMB-211ENST00000479625 ZNF98A6NK75 572 aa6.56□□□□□ -1.36
GPNMB-211ENST00000479625 RLN2P04090 185 aa6.56□□□□□ -1.36
GPNMB-211ENST00000479625 IZUMO2Q6UXV1 221 aa6.56□□□□□ -1.36
GPNMB-211ENST00000479625 ZNF493Q6ZR52 646 aa6.56□□□□□ -1.36
GPNMB-211ENST00000479625 TMED4Q7Z7H5 227 aa6.56□□□□□ -1.36
GPNMB-211ENST00000479625 FAM219AQ8IW50 185 aa6.56□□□□□ -1.36
GPNMB-211ENST00000479625 SELENOHQ8IZQ5 122 aaKnown RBP6.56□□□□□ -1.36
GPNMB-211ENST00000479625 CCDC71LQ8N9Z2 235 aa6.56□□□□□ -1.36
GPNMB-211ENST00000479625 OR4D10Q8NGI6 311 aa6.56□□□□□ -1.36
GPNMB-211ENST00000479625 SLC35E1Q96K37 410 aa6.56□□□□□ -1.36
GPNMB-211ENST00000479625 TMEM222Q9H0R3 208 aa6.56□□□□□ -1.36
GPNMB-211ENST00000479625 SNRPGP15A8MWD9 76 aa6.55□□□□□ -1.36
GPNMB-211ENST00000479625 ANKRD65E5RJM6 399 aa6.55□□□□□ -1.36
GPNMB-211ENST00000479625 ADAP1O75689 374 aa6.55□□□□□ -1.36
GPNMB-211ENST00000479625 CDS2O95674 445 aa6.55□□□□□ -1.36
GPNMB-211ENST00000479625 GATA2P23769 480 aaPredicted RBP6.55□□□□□ -1.36
GPNMB-211ENST00000479625 RNASE10Q5GAN6 216 aaKnown RBP6.55□□□□□ -1.36
GPNMB-211ENST00000479625 TMEM268Q5VZI3 342 aa6.55□□□□□ -1.36
GPNMB-211ENST00000479625 Q6ZTI0 123 aa6.55□□□□□ -1.36
GPNMB-211ENST00000479625 NFE4Q86UQ8 179 aa6.55□□□□□ -1.36
GPNMB-211ENST00000479625 LGI3Q8N145 548 aa6.55□□□□□ -1.36
GPNMB-211ENST00000479625 OR8A1Q8NGG7 326 aa6.55□□□□□ -1.36
GPNMB-211ENST00000479625 MARCH1Q8TCQ1 289 aa6.55□□□□□ -1.36
GPNMB-211ENST00000479625 GLYATL2Q8WU03 294 aa6.55□□□□□ -1.36
GPNMB-211ENST00000479625 RBPMSQ93062 196 aaKnown RBP6.55□□□□□ -1.36
GPNMB-211ENST00000479625 LRP2P98164 4655 aa6.54□□□□□ -1.36
GPNMB-211ENST00000479625 SNURFLB1AK76 121 aa6.54□□□□□ -1.36
GPNMB-211ENST00000479625 GABARAPH6UMI1 98 aa6.54□□□□□ -1.36
GPNMB-211ENST00000479625 H7BYZ3 331 aa6.54□□□□□ -1.36
GPNMB-211ENST00000479625 GABARAPO95166 117 aa6.54□□□□□ -1.36
GPNMB-211ENST00000479625 CD3DP04234 171 aa6.54□□□□□ -1.36
GPNMB-211ENST00000479625 CDKN1BP46527 198 aa6.54□□□□□ -1.36
GPNMB-211ENST00000479625 TMEM182Q6ZP80 229 aaPredicted RBP6.54□□□□□ -1.36
GPNMB-211ENST00000479625 NOXA1Q86UR1 476 aa6.54□□□□□ -1.36
GPNMB-211ENST00000479625 OR1B1Q8NGR6 318 aa6.54□□□□□ -1.36
GPNMB-211ENST00000479625 DTD1Q8TEA8 209 aa6.54□□□□□ -1.36
GPNMB-211ENST00000479625 IL22RA2Q969J5 263 aa6.54□□□□□ -1.36
GPNMB-211ENST00000479625 RBKSQ9H477 322 aa6.54□□□□□ -1.36
GPNMB-211ENST00000479625 PPP1R14DQ9NXH3 145 aa6.54□□□□□ -1.36
GPNMB-211ENST00000479625 TEX13DA0A0J9YY54 714 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms