RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 TMEM231Q9H6L2 316 aa10.57□□□□□ -0.72
ATG4B-218ENST00000479554 PFDN2Q9UHV9 154 aa10.57□□□□□ -0.72
ATG4B-218ENST00000479554 DNASE2O00115 360 aaPredicted RBP10.56□□□□□ -0.72
ATG4B-218ENST00000479554 CLN5O75503 358 aa10.56□□□□□ -0.72
ATG4B-218ENST00000479554 S100A1P23297 94 aa10.56□□□□□ -0.72
ATG4B-218ENST00000479554 NPY1RP25929 384 aa10.56□□□□□ -0.72
ATG4B-218ENST00000479554 RAB5CP51148 216 aa10.56□□□□□ -0.72
ATG4B-218ENST00000479554 RPL11P62913 178 aaKnown RBP10.56□□□□□ -0.72
ATG4B-218ENST00000479554 SLC24A4Q8NFF2 622 aa10.56□□□□□ -0.72
ATG4B-218ENST00000479554 GGACTQ9BVM4 153 aa10.56□□□□□ -0.72
ATG4B-218ENST00000479554 CSTL1Q9H114 145 aa10.56□□□□□ -0.72
ATG4B-218ENST00000479554 FNDC4Q9H6D8 234 aaPredicted RBP10.56□□□□□ -0.72
ATG4B-218ENST00000479554 BIRC6Q9NR09 4857 aa10.56□□□□□ -0.72
ATG4B-218ENST00000479554 ZNF705EA8MWA4 302 aaPredicted RBP10.55□□□□□ -0.72
ATG4B-218ENST00000479554 ATF4P18848 351 aaPredicted RBP10.55□□□□□ -0.72
ATG4B-218ENST00000479554 BLOC1S1P78537 153 aa10.55□□□□□ -0.72
ATG4B-218ENST00000479554 BSXQ3C1V8 233 aa10.55□□□□□ -0.72
ATG4B-218ENST00000479554 COMMD7Q86VX2 200 aa10.55□□□□□ -0.72
ATG4B-218ENST00000479554 OR2G3Q8NGZ4 309 aa10.55□□□□□ -0.72
ATG4B-218ENST00000479554 OR4X1Q8NH49 305 aa10.55□□□□□ -0.72
ATG4B-218ENST00000479554 MS4A6AQ9H2W1 248 aa10.55□□□□□ -0.72
ATG4B-218ENST00000479554 UQCC1Q9NVA1 299 aa10.55□□□□□ -0.72
ATG4B-218ENST00000479554 MRPL36Q9P0J6 103 aaKnown RBP10.55□□□□□ -0.72
ATG4B-218ENST00000479554 TRAV2A0A0B4J234 112 aa10.54□□□□□ -0.72
ATG4B-218ENST00000479554 A0A1W2PS18 150 aa10.54□□□□□ -0.72
ATG4B-218ENST00000479554 UMAD1C9J7I0 102 aa10.54□□□□□ -0.72
ATG4B-218ENST00000479554 IFNA4P05014 189 aa10.54□□□□□ -0.72
ATG4B-218ENST00000479554 NPPCP23582 126 aa10.54□□□□□ -0.72
ATG4B-218ENST00000479554 DLK1P80370 383 aa10.54□□□□□ -0.72
ATG4B-218ENST00000479554 VWC2Q2TAL6 325 aa10.54□□□□□ -0.72
ATG4B-218ENST00000479554 GATAD1Q8WUU5 269 aa10.54□□□□□ -0.72
ATG4B-218ENST00000479554 LINC00476Q8WZB0 136 aa10.54□□□□□ -0.72
ATG4B-218ENST00000479554 NARS2Q96I59 477 aaKnown RBP10.54□□□□□ -0.72
ATG4B-218ENST00000479554 METTL26Q96S19 204 aa10.54□□□□□ -0.72
ATG4B-218ENST00000479554 PSMG3Q9BT73 122 aaPredicted RBP10.54□□□□□ -0.72
ATG4B-218ENST00000479554 WDR61Q9GZS3 305 aaKnown RBP10.54□□□□□ -0.72
ATG4B-218ENST00000479554 SH3BGRL3Q9H299 93 aa10.54□□□□□ -0.72
ATG4B-218ENST00000479554 PLA2G2EQ9NZK7 142 aa10.54□□□□□ -0.72
ATG4B-218ENST00000479554 RABAC1Q9UI14 185 aa10.54□□□□□ -0.72
ATG4B-218ENST00000479554 TIMM9Q9Y5J7 89 aa10.54□□□□□ -0.72
ATG4B-218ENST00000479554 TRAV30A0A087WSZ9 112 aa10.53□□□□□ -0.72
ATG4B-218ENST00000479554 UBE2L5PA0A1B0GUS4 154 aa10.53□□□□□ -0.72
ATG4B-218ENST00000479554 CA1P00915 261 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-218ENST00000479554 DEFB131AP59861 70 aa10.53□□□□□ -0.72
ATG4B-218ENST00000479554 MLANAQ16655 118 aa10.53□□□□□ -0.72
ATG4B-218ENST00000479554 C2orf83Q53S99 150 aa10.53□□□□□ -0.72
ATG4B-218ENST00000479554 LEMD1Q68G75 181 aa10.53□□□□□ -0.72
ATG4B-218ENST00000479554 CEMP1Q6PRD7 247 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-218ENST00000479554 TMEM170AQ8WVE7 144 aa10.53□□□□□ -0.72
ATG4B-218ENST00000479554 PRSS46E5RG02 174 aa10.52□□□□□ -0.73
ATG4B-218ENST00000479554 FNDC10F2Z333 226 aa10.52□□□□□ -0.73
ATG4B-218ENST00000479554 LY6G6CO95867 125 aa10.52□□□□□ -0.73
ATG4B-218ENST00000479554 IGKV1-17P01599 117 aa10.52□□□□□ -0.73
ATG4B-218ENST00000479554 CRYBB3P26998 211 aa10.52□□□□□ -0.73
ATG4B-218ENST00000479554 TIGITQ495A1 244 aa10.52□□□□□ -0.73
ATG4B-218ENST00000479554 TMEM182Q6ZP80 229 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-218ENST00000479554 FAM24BQ8N5W8 94 aa10.52□□□□□ -0.73
ATG4B-218ENST00000479554 STXBP6Q8NFX7 210 aa10.52□□□□□ -0.73
ATG4B-218ENST00000479554 RARRES2Q99969 163 aa10.52□□□□□ -0.73
ATG4B-218ENST00000479554 KLK5Q9Y337 293 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-218ENST00000479554 FGF7P21781 194 aa10.51□□□□□ -0.73
ATG4B-218ENST00000479554 CAMLGP49069 296 aa10.51□□□□□ -0.73
ATG4B-218ENST00000479554 RND2P52198 227 aa10.51□□□□□ -0.73
ATG4B-218ENST00000479554 SERF2P84101 59 aa10.51□□□□□ -0.73
ATG4B-218ENST00000479554 AKR1C8PQ5T2L2 129 aa10.51□□□□□ -0.73
ATG4B-218ENST00000479554 PXDC1Q5TGL8 231 aa10.51□□□□□ -0.73
ATG4B-218ENST00000479554 DPPA3Q6W0C5 159 aa10.51□□□□□ -0.73
ATG4B-218ENST00000479554 Q6ZRG5 221 aa10.51□□□□□ -0.73
ATG4B-218ENST00000479554 STHQ8IWL8 128 aa10.51□□□□□ -0.73
ATG4B-218ENST00000479554 OR11H2Q8NH07 326 aa10.51□□□□□ -0.73
ATG4B-218ENST00000479554 RNASEH2CQ8TDP1 164 aaKnown RBP10.51□□□□□ -0.73
ATG4B-218ENST00000479554 GRAMD2BQ96HH9 432 aa10.51□□□□□ -0.73
ATG4B-218ENST00000479554 C17orf112F2Z3M2 114 aa10.5□□□□□ -0.73
ATG4B-218ENST00000479554 MPDU1O75352 247 aa10.5□□□□□ -0.73
ATG4B-218ENST00000479554 IGLC1P0CG04 106 aa10.5□□□□□ -0.73
ATG4B-218ENST00000479554 OR10J1P30954 320 aa10.5□□□□□ -0.73
ATG4B-218ENST00000479554 EIF4E3Q8N5X7 224 aaKnown RBP10.5□□□□□ -0.73
ATG4B-218ENST00000479554 ZNF709Q8N972 641 aa10.5□□□□□ -0.73
ATG4B-218ENST00000479554 RSG1Q9BU20 258 aa10.5□□□□□ -0.73
ATG4B-218ENST00000479554 C11orf68Q9H3H3 251 aaKnown RBP10.5□□□□□ -0.73
ATG4B-218ENST00000479554 WDR83OSQ9Y284 106 aa10.5□□□□□ -0.73
ATG4B-218ENST00000479554 SMCO3A2RU48 225 aa10.49□□□□□ -0.73
ATG4B-218ENST00000479554 RAB19A4D1S5 217 aa10.49□□□□□ -0.73
ATG4B-218ENST00000479554 K7EQG2 157 aa10.49□□□□□ -0.73
ATG4B-218ENST00000479554 GPX4P36969 197 aaPredicted RBP10.49□□□□□ -0.73
ATG4B-218ENST00000479554 ETFRF1Q6IPR1 90 aa10.49□□□□□ -0.73
ATG4B-218ENST00000479554 FAM213BQ8TBF2 198 aa10.49□□□□□ -0.73
ATG4B-218ENST00000479554 Q8WTZ3 238 aa10.49□□□□□ -0.73
ATG4B-218ENST00000479554 PHLDA1Q8WV24 401 aaPredicted RBP10.49□□□□□ -0.73
ATG4B-218ENST00000479554 NPVFQ9HCQ7 196 aa10.49□□□□□ -0.73
ATG4B-218ENST00000479554 RFNGQ9Y644 331 aa10.49□□□□□ -0.73
ATG4B-218ENST00000479554 MBP02144 154 aa10.48□□□□□ -0.73
ATG4B-218ENST00000479554 ZNF688P0C7X2 276 aa10.48□□□□□ -0.73
ATG4B-218ENST00000479554 YPEL3P61236 119 aaPredicted RBP10.48□□□□□ -0.73
ATG4B-218ENST00000479554 RAB31Q13636 194 aa10.48□□□□□ -0.73
ATG4B-218ENST00000479554 LYPD6BQ8NI32 183 aa10.48□□□□□ -0.73
ATG4B-218ENST00000479554 NPCDR1Q9BY65 106 aa10.48□□□□□ -0.73
ATG4B-218ENST00000479554 HRH4Q9H3N8 390 aa10.48□□□□□ -0.73
ATG4B-218ENST00000479554 KCNIP2Q9NS61 270 aa10.48□□□□□ -0.73
ATG4B-218ENST00000479554 HELTA6NFD8 242 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms