RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 SMIM12Q96EX1 92 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 HARBI1Q96MB7 349 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 SPIN2AQ99865 258 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 SPIN2BQ9BPZ2 258 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 KLK15Q9H2R5 256 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 NAA60Q9H7X0 242 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 GNB4Q9HAV0 340 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 UQCR10Q9UDW1 63 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 RCL1Q9Y2P8 373 aaKnown RBP5.13□□□□□ -1.59
VCP-205ENST00000479300 SMAD5-AS1Q9Y6J3 95 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 SORL1Q92673 2214 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 A0A1B0GV50 99 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 FOXI3A8MTJ6 420 aaPredicted RBP5.12□□□□□ -1.59
VCP-205ENST00000479300 TMEM238C9JI98 176 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 TMEM250H0YL14 139 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 H3BUA1 57 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 FCN1O00602 326 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 KBTBD11O94819 623 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 NDUFB8O95169 186 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 IGHV3-11P01762 117 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 OR5G3P0C626 314 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 PI3P19957 117 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 AADACP22760 399 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 DTYMKP23919 212 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 CRIP2P52943 208 aaPredicted RBP5.12□□□□□ -1.59
VCP-205ENST00000479300 TAS2R30P59541 319 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 RPL19P84098 196 aaKnown RBP5.12□□□□□ -1.59
VCP-205ENST00000479300 SRSF7Q16629 238 aaKnown RBP eCLIP5.12□□□□□ -1.59
VCP-205ENST00000479300 PRSS8Q16651 343 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 BSXQ3C1V8 233 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 PLAC9Q5JTB6 97 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 TOMM20LQ6UXN7 152 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 CMTM1Q8IZ96 169 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 LGI3Q8N145 548 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 MYOZ3Q8TDC0 251 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 CYYR1Q96J86 154 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 TM2D3Q9BRN9 247 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 FAM103A1Q9BTL3 118 aaKnown RBP5.12□□□□□ -1.59
VCP-205ENST00000479300 ST6GALNAC5Q9BVH7 336 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 CSTL1Q9H114 145 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 SLC2A9Q9NRM0 540 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 COX11Q9Y6N1 276 aa5.12□□□□□ -1.59
VCP-205ENST00000479300 TRAV9-1A0A075B6T8 112 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 IGHV4OR15-8A0A075B7B6 117 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 A0A087WW49 117 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 IGKV1-6A0A0C4DH72 117 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 DUXBA0A1W2PPF3 345 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 PRSS47A8MTI9 375 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 TUSC2O75896 110 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 UCP1P25874 307 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 SLURP1P55000 103 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 TNXAQ16473 311 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 BATFQ16520 125 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 MAJINQ3KP22 176 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 TMEM177Q53S58 311 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 TMEM41BQ5BJD5 291 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 PET117Q6UWS5 81 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 CCDC71LQ8N9Z2 235 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 TEX45Q8NA69 505 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 OR5B3Q8NH48 314 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 OSR1Q8TAX0 266 aaPredicted RBP5.11□□□□□ -1.59
VCP-205ENST00000479300 CMTM2Q8TAZ6 248 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 DLX4Q92988 240 aaPredicted RBP5.11□□□□□ -1.59
VCP-205ENST00000479300 CIB3Q96Q77 187 aaPredicted RBP5.11□□□□□ -1.59
VCP-205ENST00000479300 ATP5SQ99766 215 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 VPS25Q9BRG1 176 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 PSMG3Q9BT73 122 aaPredicted RBP5.11□□□□□ -1.59
VCP-205ENST00000479300 PARD6GQ9BYG4 376 aaPredicted RBP5.11□□□□□ -1.59
VCP-205ENST00000479300 ZMAT4Q9H898 229 aa5.11□□□□□ -1.59
VCP-205ENST00000479300 MRPL27Q9P0M9 148 aaKnown RBP5.11□□□□□ -1.59
VCP-205ENST00000479300 MRPS16Q9Y3D3 137 aaKnown RBP5.11□□□□□ -1.59
VCP-205ENST00000479300 PIGBOS1A0A0B4J2F0 54 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 IGSF23A1L1A6 192 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 IGKV1-16P04430 117 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 EGR2P11161 476 aaPredicted RBP5.1□□□□□ -1.59
VCP-205ENST00000479300 CTRLP40313 264 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 TFPI2P48307 235 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 HNRNPA3P51991 378 aaKnown RBP5.1□□□□□ -1.59
VCP-205ENST00000479300 UCP3P55916 312 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 RPL23P62829 140 aaKnown RBP5.1□□□□□ -1.59
VCP-205ENST00000479300 RHOGP84095 191 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 NDPQ00604 133 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 ADIRFQ15847 76 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 RPEL1Q2QD12 228 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 C19orf54Q5BKX5 351 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 ACSM6Q6P461 480 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 Q6ZS49 121 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 TCF24Q7RTU0 167 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 MMD2Q8IY49 270 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 TMEM252Q8N6L7 170 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 ZNF645Q8N7E2 425 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 OR4C5Q8NGB2 326 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 VSTM2AQ8TAG5 236 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 TMEM37Q8WXS4 190 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 RPUSD4Q96CM3 377 aaKnown RBP5.1□□□□□ -1.59
VCP-205ENST00000479300 NUDT11Q96G61 164 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 USMG5Q96IX5 58 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 RNF2Q99496 336 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 SMIM7Q9BQ49 75 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 BET1LQ9NYM9 111 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms