RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 RAP2BP61225 183 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 RAB31Q13636 194 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 HAGHQ16775 308 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 VWC2Q2TAL6 325 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 RNF126Q9BV68 326 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 SCRT1Q9BWW7 348 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 GGTLC1Q9BX51 225 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 SMIM3Q9BZL3 60 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 NRN1Q9NPD7 142 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 WDR83OSQ9Y284 106 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 ZNF98A6NK75 572 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 H3BRN7 92 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 K7EQG2 157 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 UBE2CO00762 179 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 COX7A2P2O60397 106 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 ATP6V1FQ16864 119 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 PSMG4Q5JS54 123 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 MIC13Q5XKP0 118 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 DCANP1Q8TF63 244 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 SLC25A39Q9BZJ4 359 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-215ENST00000478531 ARV1Q9H2C2 271 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 SLC25A32Q9H2D1 315 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 ZMAT4Q9H898 229 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 RETNQ9HD89 108 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 FBXL17Q9UF56 701 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 SLC45A2Q9UMX9 530 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 HSPB11Q9Y547 144 aa5.12□□□□□ -1.59
BRCA1-215ENST00000478531 LOC102724200A0A096LPH7 203 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-215ENST00000478531 TRAV2A0A0B4J234 112 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 LCE2BO14633 110 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 GIPP09681 153 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-215ENST00000478531 NHLRC4P0CG21 123 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-215ENST00000478531 S100A7P31151 101 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 GALR1P47211 349 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 SNRPD3P62318 126 aaKnown RBP5.11□□□□□ -1.59
BRCA1-215ENST00000478531 FGL1Q08830 312 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 C1orf194Q5T5A4 169 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 PATE2Q6UY27 113 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 LINC00305Q7Z4B0 112 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 ATP5SQ99766 215 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 SHANK2-AS3Q9BTD1 123 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 NPCDR1Q9BY65 106 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 PXMP4Q9Y6I8 212 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 TENM2Q9NT68 2774 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 FXYD6-FXYD2A0A087WZ82 144 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 SMCPP49901 116 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-215ENST00000478531 PLP1P60201 277 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 OPCMLQ14982 345 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 Q5BKY6 102 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 C10orf113Q5VZT2 155 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 Q6ZRG5 221 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 S100A7AQ86SG5 101 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 OR2T35Q8NGX2 323 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 LINC00052Q96N35 136 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 RCHY1Q96PM5 261 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 FAM110AQ9BQ89 295 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 RSG1Q9BU20 258 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 SLC39A9Q9NUM3 307 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 U3KQK5 164 aa5.11□□□□□ -1.59
BRCA1-215ENST00000478531 KNCNA6PVL3 124 aa5.1□□□□□ -1.59
BRCA1-215ENST00000478531 MPDU1O75352 247 aa5.1□□□□□ -1.59
BRCA1-215ENST00000478531 SNRPCP09234 159 aaKnown RBP5.1□□□□□ -1.59
BRCA1-215ENST00000478531 LYL1P12980 280 aa5.1□□□□□ -1.59
BRCA1-215ENST00000478531 CMC4P56277 68 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-215ENST00000478531 ACTL10Q5JWF8 245 aa5.1□□□□□ -1.59
BRCA1-215ENST00000478531 PXDC1Q5TGL8 231 aa5.1□□□□□ -1.59
BRCA1-215ENST00000478531 STHQ8IWL8 128 aa5.1□□□□□ -1.59
BRCA1-215ENST00000478531 ZNF709Q8N972 641 aa5.1□□□□□ -1.59
BRCA1-215ENST00000478531 ASB13Q8WXK3 278 aa5.1□□□□□ -1.59
BRCA1-215ENST00000478531 TMEM37Q8WXS4 190 aa5.1□□□□□ -1.59
BRCA1-215ENST00000478531 C16orf92Q96LL3 132 aa5.1□□□□□ -1.59
BRCA1-215ENST00000478531 SPATA25Q9BR10 227 aa5.1□□□□□ -1.59
BRCA1-215ENST00000478531 TM2D3Q9BRN9 247 aa5.1□□□□□ -1.59
BRCA1-215ENST00000478531 ELOA3CA0A087WX78 387 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-215ENST00000478531 IFNA5P01569 189 aa5.09□□□□□ -1.59
BRCA1-215ENST00000478531 RPL7P18124 248 aaKnown RBP5.09□□□□□ -1.59
BRCA1-215ENST00000478531 ID1P41134 155 aa5.09□□□□□ -1.59
BRCA1-215ENST00000478531 RPL29P47914 159 aaKnown RBP5.09□□□□□ -1.59
BRCA1-215ENST00000478531 APOC4P55056 127 aa5.09□□□□□ -1.59
BRCA1-215ENST00000478531 DEFB1P60022 68 aa5.09□□□□□ -1.59
BRCA1-215ENST00000478531 DEFB135Q30KP9 77 aa5.09□□□□□ -1.59
BRCA1-215ENST00000478531 GCSAMLQ5JQS6 135 aa5.09□□□□□ -1.59
BRCA1-215ENST00000478531 MORN5Q5VZ52 161 aa5.09□□□□□ -1.59
BRCA1-215ENST00000478531 IGFL4Q6B9Z1 124 aa5.09□□□□□ -1.59
BRCA1-215ENST00000478531 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.09□□□□□ -1.59
BRCA1-215ENST00000478531 LINC00322Q6ZN03 302 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-215ENST00000478531 OR1L4Q8NGR5 311 aa5.09□□□□□ -1.59
BRCA1-215ENST00000478531 GPR82Q96P67 336 aa5.09□□□□□ -1.59
BRCA1-215ENST00000478531 PFDN5Q99471 154 aa5.09□□□□□ -1.59
BRCA1-215ENST00000478531 SPXQ9BT56 116 aa5.09□□□□□ -1.59
BRCA1-215ENST00000478531 WDR61Q9GZS3 305 aaKnown RBP5.09□□□□□ -1.59
BRCA1-215ENST00000478531 DNAJC4Q9NNZ3 241 aa5.09□□□□□ -1.59
BRCA1-215ENST00000478531 TRAV5A0A0B4J249 113 aa5.09□□□□□ -1.6
BRCA1-215ENST00000478531 C17orf112F2Z3M2 114 aa5.09□□□□□ -1.6
BRCA1-215ENST00000478531 SMLR1H3BR10 107 aa5.09□□□□□ -1.6
BRCA1-215ENST00000478531 H3BTX0 84 aa5.09□□□□□ -1.6
BRCA1-215ENST00000478531 PSMB3P49720 205 aa5.09□□□□□ -1.6
BRCA1-215ENST00000478531 MEOX2P50222 304 aa5.09□□□□□ -1.6
BRCA1-215ENST00000478531 RNF182Q8N6D2 247 aa5.09□□□□□ -1.6
BRCA1-215ENST00000478531 INO80EQ8NBZ0 244 aaPredicted RBP5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms