RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 DEFB130BP0DP73 79 aa8.28□□□□□ -1.08
CPSF7-211ENST00000477890 DEFB130AP0DP74 79 aa8.28□□□□□ -1.08
CPSF7-211ENST00000477890 VAMP1P23763 118 aa8.28□□□□□ -1.08
CPSF7-211ENST00000477890 FAM3BP58499 235 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-211ENST00000477890 RPP30P78346 268 aaKnown RBP8.28□□□□□ -1.08
CPSF7-211ENST00000477890 AKR1C1Q04828 323 aa8.28□□□□□ -1.08
CPSF7-211ENST00000477890 FGL1Q08830 312 aa8.28□□□□□ -1.08
CPSF7-211ENST00000477890 TMEM128Q5BJH2 165 aa8.28□□□□□ -1.08
CPSF7-211ENST00000477890 TMEM182Q6ZP80 229 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-211ENST00000477890 RNF182Q8N6D2 247 aa8.28□□□□□ -1.08
CPSF7-211ENST00000477890 OR4D5Q8NGN0 318 aa8.28□□□□□ -1.08
CPSF7-211ENST00000477890 GPR82Q96P67 336 aa8.28□□□□□ -1.08
CPSF7-211ENST00000477890 CIB3Q96Q77 187 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-211ENST00000477890 TMEM147Q9BVK8 224 aa8.28□□□□□ -1.08
CPSF7-211ENST00000477890 KRTAP4-5Q9BYR2 181 aa8.28□□□□□ -1.08
CPSF7-211ENST00000477890 TRAV8-2A0A0B4J237 113 aa8.27□□□□□ -1.09
CPSF7-211ENST00000477890 PRSS46E5RG02 174 aa8.27□□□□□ -1.09
CPSF7-211ENST00000477890 SYNGR2O43760 224 aa8.27□□□□□ -1.09
CPSF7-211ENST00000477890 SLC25A6P12236 298 aa8.27□□□□□ -1.09
CPSF7-211ENST00000477890 S100A7P31151 101 aa8.27□□□□□ -1.09
CPSF7-211ENST00000477890 TNFSF8P32971 234 aa8.27□□□□□ -1.09
CPSF7-211ENST00000477890 FAUP35544 74 aaKnown RBP8.27□□□□□ -1.09
CPSF7-211ENST00000477890 TNP2Q05952 138 aa8.27□□□□□ -1.09
CPSF7-211ENST00000477890 SPANXN5Q5MJ07 72 aa8.27□□□□□ -1.09
CPSF7-211ENST00000477890 BAP18Q8IXM2 172 aa8.27□□□□□ -1.09
CPSF7-211ENST00000477890 LRTM2Q8N967 370 aa8.27□□□□□ -1.09
CPSF7-211ENST00000477890 ZNF738Q8NE65 137 aa8.27□□□□□ -1.09
CPSF7-211ENST00000477890 RAB2BQ8WUD1 216 aa8.27□□□□□ -1.09
CPSF7-211ENST00000477890 TRAV12-2A0A075B6T6 113 aa8.26□□□□□ -1.09
CPSF7-211ENST00000477890 F5H768 121 aa8.26□□□□□ -1.09
CPSF7-211ENST00000477890 H3BP45 60 aa8.26□□□□□ -1.09
CPSF7-211ENST00000477890 NUDT3O95989 172 aa8.26□□□□□ -1.09
CPSF7-211ENST00000477890 B2MP61769 119 aa8.26□□□□□ -1.09
CPSF7-211ENST00000477890 FCN2Q15485 313 aa8.26□□□□□ -1.09
CPSF7-211ENST00000477890 ACOT7LQ6ZUV0 252 aa8.26□□□□□ -1.09
CPSF7-211ENST00000477890 SOSTQ9BQB4 213 aa8.26□□□□□ -1.09
CPSF7-211ENST00000477890 SLC25A39Q9BZJ4 359 aaPredicted RBP8.26□□□□□ -1.09
CPSF7-211ENST00000477890 NBDYA0A0U1RRE5 68 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 PLAC8L1A1L4L8 177 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 SMCO3A2RU48 225 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 C16orf90A8MZG2 172 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 H3BRN7 92 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 BOLA2-SMG1P6H3BVE0 249 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 SFT2D2O95562 160 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 ATP5G1P05496 136 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 HOXB5P09067 269 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 AZU1P20160 251 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 TSPOP30536 169 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 ATP5G3P48201 142 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 TMBIM6P55061 237 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 AP3S2P59780 193 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 RAP2BP61225 183 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 RHOBP62745 196 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 HIST1H1AQ02539 215 aaPredicted RBP8.25□□□□□ -1.09
CPSF7-211ENST00000477890 C6orf223Q8N319 242 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 TOMM5Q8N4H5 51 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 LINC01587Q99440 93 aa8.25□□□□□ -1.09
CPSF7-211ENST00000477890 SLIRPQ9GZT3 109 aaKnown RBP8.25□□□□□ -1.09
CPSF7-211ENST00000477890 STRAPQ9Y3F4 350 aaKnown RBP8.25□□□□□ -1.09
CPSF7-211ENST00000477890 IL5P05113 134 aa8.24□□□□□ -1.09
CPSF7-211ENST00000477890 PRB4P10163 310 aaPredicted RBP8.24□□□□□ -1.09
CPSF7-211ENST00000477890 HTN1P15515 57 aa8.24□□□□□ -1.09
CPSF7-211ENST00000477890 RPL7P18124 248 aaKnown RBP8.24□□□□□ -1.09
CPSF7-211ENST00000477890 CCL18P55774 89 aa8.24□□□□□ -1.09
CPSF7-211ENST00000477890 PPP1R1AQ13522 171 aa8.24□□□□□ -1.09
CPSF7-211ENST00000477890 PYDC2Q56P42 97 aa8.24□□□□□ -1.09
CPSF7-211ENST00000477890 CYP2G1PQ6ZSU1 146 aa8.24□□□□□ -1.09
CPSF7-211ENST00000477890 TMEM144Q7Z5S9 345 aa8.24□□□□□ -1.09
CPSF7-211ENST00000477890 ZNRF2Q8NHG8 242 aa8.24□□□□□ -1.09
CPSF7-211ENST00000477890 MCFD2Q8NI22 146 aa8.24□□□□□ -1.09
CPSF7-211ENST00000477890 TRIM63Q969Q1 353 aa8.24□□□□□ -1.09
CPSF7-211ENST00000477890 BCL7BQ9BQE9 202 aa8.24□□□□□ -1.09
CPSF7-211ENST00000477890 SHANK2-AS3Q9BTD1 123 aa8.24□□□□□ -1.09
CPSF7-211ENST00000477890 PPP1R14DQ9NXH3 145 aa8.24□□□□□ -1.09
CPSF7-211ENST00000477890 HIGD1AQ9Y241 93 aa8.24□□□□□ -1.09
CPSF7-211ENST00000477890 ABCA13Q86UQ4 5058 aa8.24□□□□□ -1.09
CPSF7-211ENST00000477890 CBY3A6NI87 242 aa8.23□□□□□ -1.09
CPSF7-211ENST00000477890 NOL3O60936 208 aaKnown RBP8.23□□□□□ -1.09
CPSF7-211ENST00000477890 HYPMO75409 117 aa8.23□□□□□ -1.09
CPSF7-211ENST00000477890 OR5G3P0C626 314 aa8.23□□□□□ -1.09
CPSF7-211ENST00000477890 LINC00869P0C866 280 aa8.23□□□□□ -1.09
CPSF7-211ENST00000477890 TMEM256Q8N2U0 113 aa8.23□□□□□ -1.09
CPSF7-211ENST00000477890 OR8A1Q8NGG7 326 aa8.23□□□□□ -1.09
CPSF7-211ENST00000477890 LRRC20Q8TCA0 184 aa8.23□□□□□ -1.09
CPSF7-211ENST00000477890 UHRF2Q96PU4 802 aa8.23□□□□□ -1.09
CPSF7-211ENST00000477890 SLC25A21Q9BQT8 299 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-211ENST00000477890 LINC00588Q9Y4M8 146 aa8.23□□□□□ -1.09
CPSF7-211ENST00000477890 CXCL3P19876 107 aa8.22□□□□□ -1.09
CPSF7-211ENST00000477890 TAS2R60P59551 318 aa8.22□□□□□ -1.09
CPSF7-211ENST00000477890 POLR2GP62487 172 aaKnown RBP eCLIP8.22□□□□□ -1.09
CPSF7-211ENST00000477890 CLINT1Q14677 625 aa8.22□□□□□ -1.09
CPSF7-211ENST00000477890 PSG3Q16557 428 aa8.22□□□□□ -1.09
CPSF7-211ENST00000477890 RNF141Q8WVD5 230 aa8.22□□□□□ -1.09
CPSF7-211ENST00000477890 C16orf74Q96GX8 76 aa8.22□□□□□ -1.09
CPSF7-211ENST00000477890 PSENENQ9NZ42 101 aa8.22□□□□□ -1.09
CPSF7-211ENST00000477890 A0A087X0K7 114 aa8.21□□□□□ -1.1
CPSF7-211ENST00000477890 H3BMQ9 156 aa8.21□□□□□ -1.1
CPSF7-211ENST00000477890 ADAP1O75689 374 aa8.21□□□□□ -1.1
CPSF7-211ENST00000477890 CDK2AP2O75956 126 aa8.21□□□□□ -1.1
CPSF7-211ENST00000477890 CDKN1BP46527 198 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms