RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 CFDP00746 253 aaPredicted RBP7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 IGHV3-48P01763 117 aa7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 SEC11BP0C7V7 166 aa7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 RBMY1A1P0DJD3 496 aaKnown RBP7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 INAFM2P0DMQ5 153 aa7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 SPP1P10451 314 aa7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 CAMLGP49069 296 aa7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 IFITM2Q01629 132 aa7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 C15orf32Q32M92 178 aa7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 ZNF680Q8NEM1 530 aa7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 SCARB1Q8WTV0 552 aa7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 NPIPB3Q92617 1050 aa7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 CXorf58Q96LI9 332 aa7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 PSMG3Q9BT73 122 aaPredicted RBP7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 RSG1Q9BU20 258 aa7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 C21orf62Q9NYP8 219 aa7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 TRBV9A0A0B4J1U6 114 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 MFSD2BA6NFX1 497 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 PPP5D1E7EU14 171 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 AGPAT2O15120 278 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 FABP1P07148 127 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 P0DMU3 169 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 FAM231AP0DMU4 169 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 FAM231CP0DMU5 169 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 NPBWR1P48145 328 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 ELLP55199 621 aaPredicted RBP7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 MLANAQ16655 118 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 KLK9Q2XQG4 91 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 Q56UQ5 140 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 FAM74A1Q5RGS3 127 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 TMEM182Q6ZP80 229 aaPredicted RBP7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 THAP8Q8NA92 274 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 TMEM116Q8NCL8 245 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 OR2G3Q8NGZ4 309 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 OR4X1Q8NH49 305 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 VN1R17PQ8TDU5 208 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 EEF1AKMT3Q96AZ1 226 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 MGST2Q99735 147 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 MAP6D1Q9H9H5 199 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 MRPL36Q9P0J6 103 aaKnown RBP7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 KLK9Q9UKQ9 250 aa7.09□□□□□ -1.27
SMARCB1-206ENST00000477836 EPM2AB3EWF7 344 aa7.08□□□□□ -1.28
SMARCB1-206ENST00000477836 UMAD1C9J7I0 102 aa7.08□□□□□ -1.28
SMARCB1-206ENST00000477836 GNG7O60262 68 aa7.08□□□□□ -1.28
SMARCB1-206ENST00000477836 CLN5O75503 358 aa7.08□□□□□ -1.28
SMARCB1-206ENST00000477836 OR10J1P30954 320 aa7.08□□□□□ -1.28
SMARCB1-206ENST00000477836 MFAP4P55083 255 aa7.08□□□□□ -1.28
SMARCB1-206ENST00000477836 ATP5G2Q06055 141 aa7.08□□□□□ -1.28
SMARCB1-206ENST00000477836 AKR1C8PQ5T2L2 129 aa7.08□□□□□ -1.28
SMARCB1-206ENST00000477836 RBPMS2Q6ZRY4 209 aaKnown RBP7.08□□□□□ -1.28
SMARCB1-206ENST00000477836 OR11H2Q8NH07 326 aa7.08□□□□□ -1.28
SMARCB1-206ENST00000477836 TRGV9Q99603 122 aa7.08□□□□□ -1.28
SMARCB1-206ENST00000477836 PXMP4Q9Y6I8 212 aa7.08□□□□□ -1.28
SMARCB1-206ENST00000477836 S4R3C0 116 aa7.08□□□□□ -1.28
SMARCB1-206ENST00000477836 IGKV1OR2-108A0A075B7D4 117 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 TRAV30A0A087WSZ9 112 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 TRBV7-1A0A0A6YYK4 115 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 ZNF320A2RRD8 509 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 LGALS9O00182 355 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 OR2C1O95371 312 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 IGHV3-23P01764 117 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 MBP02144 154 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 IGLC1P0CG04 106 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 GPR183P32249 361 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 RAB5CP51148 216 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 RAB14P61106 215 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 B2MP61769 119 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 SELENOTP62341 195 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 SERF2P84101 59 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 TMEM41BQ5BJD5 291 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 FFAR4Q5NUL3 377 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 C1orf134Q5TEV5 83 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 CYP2G1PQ6ZSU1 146 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 ZNF502Q8TBZ5 544 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 LRRC20Q8TCA0 184 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 RNF141Q8WVD5 230 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 CCDC140Q96MF4 163 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 TXN2Q99757 166 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 SLC39A9Q9NUM3 307 aa7.07□□□□□ -1.28
SMARCB1-206ENST00000477836 IGKV1D-37A0A075B6S9 117 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 TRAV10A0A0B4J240 114 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 TMEM213A2RRL7 107 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 OR2T8A6NH00 312 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 ZNF705EA8MWA4 302 aaPredicted RBP7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 F8W735 103 aaPredicted RBP7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 NUPL2O15504 423 aaKnown RBP7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 GGCTO75223 188 aaKnown RBP7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 LINC00869P0C866 280 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 RPL29P47914 159 aaKnown RBP7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 SULT1A2P50226 295 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 RAB2AP61019 212 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 TNP2Q05952 138 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 TIGITQ495A1 244 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 FAM209BQ5JX69 171 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 MIC13Q5XKP0 118 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 Q6ZR54 194 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 Q6ZTC4 211 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 BPIFCQ8NFQ6 507 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 FAM213BQ8TBF2 198 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms