RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 RAP2BP61225 183 aa15.74■□□□□ 0.11
COL9A3-211ENST00000477612 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.74■□□□□ 0.11
COL9A3-211ENST00000477612 HIGD1AQ9Y241 93 aa15.74■□□□□ 0.11
COL9A3-211ENST00000477612 FAM25EA8MYX2 175 aa15.73■□□□□ 0.11
COL9A3-211ENST00000477612 L7N2F9 121 aa15.73■□□□□ 0.11
COL9A3-211ENST00000477612 VAMP2P63027 116 aa15.73■□□□□ 0.11
COL9A3-211ENST00000477612 PXDC1Q5TGL8 231 aa15.73■□□□□ 0.11
COL9A3-211ENST00000477612 C16orf92Q96LL3 132 aa15.73■□□□□ 0.11
COL9A3-211ENST00000477612 SCRT1Q9BWW7 348 aa15.73■□□□□ 0.11
COL9A3-211ENST00000477612 RPRMQ9NS64 109 aa15.73■□□□□ 0.11
COL9A3-211ENST00000477612 XCL2Q9UBD3 114 aa15.73■□□□□ 0.11
COL9A3-211ENST00000477612 LSM5Q9Y4Y9 91 aaKnown RBP15.73■□□□□ 0.11
COL9A3-211ENST00000477612 A8MTW9 85 aa15.72■□□□□ 0.11
COL9A3-211ENST00000477612 GSG1LQ6UXU4 331 aa15.72■□□□□ 0.11
COL9A3-211ENST00000477612 PATE2Q6UY27 113 aa15.72■□□□□ 0.11
COL9A3-211ENST00000477612 ZNF705AQ6ZN79 300 aaPredicted RBP15.72■□□□□ 0.11
COL9A3-211ENST00000477612 S100A7AQ86SG5 101 aa15.72■□□□□ 0.11
COL9A3-211ENST00000477612 C20orf173Q96LM9 149 aa15.72■□□□□ 0.11
COL9A3-211ENST00000477612 NEU1Q99519 415 aa15.72■□□□□ 0.11
COL9A3-211ENST00000477612 DOK5Q9P104 306 aa15.72■□□□□ 0.11
COL9A3-211ENST00000477612 A0A0J9YX75 114 aa15.71■□□□□ 0.11
COL9A3-211ENST00000477612 RPL7P18124 248 aaKnown RBP15.71■□□□□ 0.11
COL9A3-211ENST00000477612 IFITM3Q01628 133 aa15.71■□□□□ 0.11
COL9A3-211ENST00000477612 ZNF709Q8N972 641 aa15.71■□□□□ 0.11
COL9A3-211ENST00000477612 ELOA3CA0A087WX78 387 aaPredicted RBP15.7■□□□□ 0.1
COL9A3-211ENST00000477612 AGPAT2O15120 278 aa15.7■□□□□ 0.1
COL9A3-211ENST00000477612 OR5G3P0C626 314 aa15.7■□□□□ 0.1
COL9A3-211ENST00000477612 SLC38A11Q08AI6 406 aa15.7■□□□□ 0.1
COL9A3-211ENST00000477612 EBLN2Q6P2I7 272 aa15.7■□□□□ 0.1
COL9A3-211ENST00000477612 ZNF546Q86UE3 836 aa15.7■□□□□ 0.1
COL9A3-211ENST00000477612 ARL6Q9H0F7 186 aa15.7■□□□□ 0.1
COL9A3-211ENST00000477612 RNF24Q9Y225 148 aa15.7■□□□□ 0.1
COL9A3-211ENST00000477612 A0A087X0K7 114 aa15.69■□□□□ 0.1
COL9A3-211ENST00000477612 TRAV8-2A0A0B4J237 113 aa15.69■□□□□ 0.1
COL9A3-211ENST00000477612 FAM24AA6NFZ4 105 aa15.69■□□□□ 0.1
COL9A3-211ENST00000477612 ZNF705FA8MVS1 300 aaPredicted RBP15.69■□□□□ 0.1
COL9A3-211ENST00000477612 F6UB75 175 aa15.69■□□□□ 0.1
COL9A3-211ENST00000477612 ZNF705DP0CH99 300 aaPredicted RBP15.69■□□□□ 0.1
COL9A3-211ENST00000477612 ZNF705BP0CI00 300 aaPredicted RBP15.69■□□□□ 0.1
COL9A3-211ENST00000477612 PVALBP20472 110 aaPredicted RBP15.69■□□□□ 0.1
COL9A3-211ENST00000477612 PSG9Q00887 426 aa15.69■□□□□ 0.1
COL9A3-211ENST00000477612 UHRF2Q96PU4 802 aa15.69■□□□□ 0.1
COL9A3-211ENST00000477612 ARV1Q9H2C2 271 aa15.69■□□□□ 0.1
COL9A3-211ENST00000477612 C11orf94C9JXX5 98 aa15.68■□□□□ 0.1
COL9A3-211ENST00000477612 GOSR2O14653 212 aa15.68■□□□□ 0.1
COL9A3-211ENST00000477612 MRPS12O15235 138 aaKnown RBP15.68■□□□□ 0.1
COL9A3-211ENST00000477612 IGKV3-20P01619 116 aa15.68■□□□□ 0.1
COL9A3-211ENST00000477612 BCAP31P51572 246 aa15.68■□□□□ 0.1
COL9A3-211ENST00000477612 CAV2P51636 162 aa15.68■□□□□ 0.1
COL9A3-211ENST00000477612 RAB32Q13637 225 aa15.68■□□□□ 0.1
COL9A3-211ENST00000477612 VWC2Q2TAL6 325 aa15.68■□□□□ 0.1
COL9A3-211ENST00000477612 FAM78BQ5VT40 261 aa15.68■□□□□ 0.1
COL9A3-211ENST00000477612 OR4B1Q8NGF8 309 aa15.68■□□□□ 0.1
COL9A3-211ENST00000477612 ENKURQ8TC29 256 aa15.68■□□□□ 0.1
COL9A3-211ENST00000477612 MGST2Q99735 147 aa15.68■□□□□ 0.1
COL9A3-211ENST00000477612 LYRM2Q9NU23 88 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-211ENST00000477612 KMT2AQ03164 3969 aa15.68■□□□□ 0.1
COL9A3-211ENST00000477612 SMIM9A6NGZ8 99 aa15.67■□□□□ 0.1
COL9A3-211ENST00000477612 TCTAP57738 103 aa15.67■□□□□ 0.1
COL9A3-211ENST00000477612 GPN1Q9HCN4 374 aaPredicted RBP15.67■□□□□ 0.1
COL9A3-211ENST00000477612 CST7O76096 145 aa15.66■□□□□ 0.1
COL9A3-211ENST00000477612 SULT1A1P50225 295 aa15.66■□□□□ 0.1
COL9A3-211ENST00000477612 AMTNQ6UX39 209 aa15.66■□□□□ 0.1
COL9A3-211ENST00000477612 TMEM252Q8N6L7 170 aa15.66■□□□□ 0.1
COL9A3-211ENST00000477612 TMEM37Q8WXS4 190 aa15.66■□□□□ 0.1
COL9A3-211ENST00000477612 SLC35B3Q9H1N7 401 aa15.66■□□□□ 0.1
COL9A3-211ENST00000477612 WDR83OSQ9Y284 106 aa15.66■□□□□ 0.1
COL9A3-211ENST00000477612 PRAF2O60831 178 aa15.65■□□□□ 0.1
COL9A3-211ENST00000477612 LY6G6CO95867 125 aa15.65■□□□□ 0.1
COL9A3-211ENST00000477612 HLA-DMBP28068 263 aa15.65■□□□□ 0.1
COL9A3-211ENST00000477612 S100A11P31949 105 aa15.65■□□□□ 0.1
COL9A3-211ENST00000477612 FXYD7P58549 80 aa15.65■□□□□ 0.1
COL9A3-211ENST00000477612 NRARPQ7Z6K4 114 aa15.65■□□□□ 0.1
COL9A3-211ENST00000477612 C2CD4CQ8TF44 421 aa15.65■□□□□ 0.1
COL9A3-211ENST00000477612 CHAC2Q8WUX2 184 aa15.65■□□□□ 0.1
COL9A3-211ENST00000477612 BATF3Q9NR55 127 aa15.65■□□□□ 0.1
COL9A3-211ENST00000477612 EPPK1P58107 5090 aaKnown RBP15.65■□□□□ 0.1
COL9A3-211ENST00000477612 DUSP14O95147 198 aaKnown RBP15.64■□□□□ 0.09
COL9A3-211ENST00000477612 CAMLGP49069 296 aa15.64■□□□□ 0.09
COL9A3-211ENST00000477612 S100A10P60903 97 aa15.64■□□□□ 0.09
COL9A3-211ENST00000477612 PRR20EP86478 221 aa15.64■□□□□ 0.09
COL9A3-211ENST00000477612 PRR20CP86479 221 aa15.64■□□□□ 0.09
COL9A3-211ENST00000477612 PRR20DP86480 221 aa15.64■□□□□ 0.09
COL9A3-211ENST00000477612 PRR20BP86481 221 aa15.64■□□□□ 0.09
COL9A3-211ENST00000477612 PRR20AP86496 221 aa15.64■□□□□ 0.09
COL9A3-211ENST00000477612 FGL1Q08830 312 aa15.64■□□□□ 0.09
COL9A3-211ENST00000477612 RAB31Q13636 194 aa15.64■□□□□ 0.09
COL9A3-211ENST00000477612 IGFL4Q6B9Z1 124 aa15.64■□□□□ 0.09
COL9A3-211ENST00000477612 LGALS9CQ6DKI2 356 aa15.64■□□□□ 0.09
COL9A3-211ENST00000477612 LINC00305Q7Z4B0 112 aa15.64■□□□□ 0.09
COL9A3-211ENST00000477612 UQCC1Q9NVA1 299 aa15.64■□□□□ 0.09
COL9A3-211ENST00000477612 IGSF23A1L1A6 192 aa15.63■□□□□ 0.09
COL9A3-211ENST00000477612 CXCL2P19875 107 aa15.63■□□□□ 0.09
COL9A3-211ENST00000477612 CXCL3P19876 107 aa15.63■□□□□ 0.09
COL9A3-211ENST00000477612 ATP6V1FQ16864 119 aa15.63■□□□□ 0.09
COL9A3-211ENST00000477612 C1orf158Q8N1D5 194 aa15.63■□□□□ 0.09
COL9A3-211ENST00000477612 MARVELD1Q9BSK0 173 aa15.63■□□□□ 0.09
COL9A3-211ENST00000477612 NMES1Q9C002 83 aa15.63■□□□□ 0.09
COL9A3-211ENST00000477612 CELA1Q9UNI1 258 aa15.63■□□□□ 0.09
COL9A3-211ENST00000477612 VPS13DQ5THJ4 4388 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms