RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 IGHV7-4-1A0A0J9YVY3 117 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 ZFP92A6NM28 416 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 AGPAT2O15120 278 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 HBE1P02100 147 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 FABP1P07148 127 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 RPL29P47914 159 aaKnown RBP6.18□□□□□ -1.42
HDAC6-221ENST00000477561 TFPI2P48307 235 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 RND2P52198 227 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 B2MP61769 119 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 FFAR4Q5NUL3 377 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 PXDC1Q5TGL8 231 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 LINC00322Q6ZN03 302 aaPredicted RBP6.18□□□□□ -1.42
HDAC6-221ENST00000477561 THAP8Q8NA92 274 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 TMEM116Q8NCL8 245 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 OR4X1Q8NH49 305 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 PCNPQ8WW12 178 aaKnown RBP6.18□□□□□ -1.42
HDAC6-221ENST00000477561 NPIPB3Q92617 1050 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 RNF2Q99496 336 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 FAM110AQ9BQ89 295 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 SPATA25Q9BR10 227 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 RHPN1-AS1Q9BWJ2 59 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 GGTLC1Q9BX51 225 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 PUS1Q9Y606 427 aaKnown RBP eCLIP6.18□□□□□ -1.42
HDAC6-221ENST00000477561 PXMP4Q9Y6I8 212 aa6.18□□□□□ -1.42
HDAC6-221ENST00000477561 TRAV30A0A087WSZ9 112 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 CHEK1O14757 476 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 TSPAN4O14817 238 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 CLN5O75503 358 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 APOHP02749 345 aaPredicted RBP6.17□□□□□ -1.42
HDAC6-221ENST00000477561 H2AFB1P0C5Y9 115 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 M6PRP20645 277 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 OR10J1P30954 320 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 SELENOTP62341 195 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 TIGITQ495A1 244 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 MIC13Q5XKP0 118 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 ZNF600Q6ZNG1 722 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 CYP2G1PQ6ZSU1 146 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 COMMD7Q86VX2 200 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 GBGT1Q8N5D6 347 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 STPG3Q8N7X2 389 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 OR10G4Q8NGN3 311 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 OR10G9Q8NGN4 311 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 OR10G7Q8NGN6 311 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 CITED4Q96RK1 184 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 TRGV9Q99603 122 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 SPAG8Q99932 426 aaPredicted RBP6.17□□□□□ -1.42
HDAC6-221ENST00000477561 ACTR3CQ9C0K3 210 aaPredicted RBP6.17□□□□□ -1.42
HDAC6-221ENST00000477561 HRH4Q9H3N8 390 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 SLC39A9Q9NUM3 307 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 SLC45A2Q9UMX9 530 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 STAB2Q8WWQ8 2551 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 DNAH7Q8WXX0 4024 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 NBEAL2Q6ZNJ1 2754 aa6.17□□□□□ -1.42
HDAC6-221ENST00000477561 CTXND1A0A1B0GTU2 59 aa6.16□□□□□ -1.42
HDAC6-221ENST00000477561 A0A1W2PPV4 95 aa6.16□□□□□ -1.42
HDAC6-221ENST00000477561 TCF24Q7RTU0 167 aa6.16□□□□□ -1.42
HDAC6-221ENST00000477561 WFDC3Q8IUB2 231 aa6.16□□□□□ -1.42
HDAC6-221ENST00000477561 SLC7A5P1Q8MH63 180 aa6.16□□□□□ -1.42
HDAC6-221ENST00000477561 BPIFCQ8NFQ6 507 aa6.16□□□□□ -1.42
HDAC6-221ENST00000477561 OR1L4Q8NGR5 311 aa6.16□□□□□ -1.42
HDAC6-221ENST00000477561 MUC7Q8TAX7 377 aa6.16□□□□□ -1.42
HDAC6-221ENST00000477561 RPRMQ9NS64 109 aa6.16□□□□□ -1.42
HDAC6-221ENST00000477561 RFNGQ9Y644 331 aa6.16□□□□□ -1.42
HDAC6-221ENST00000477561 IGKV1OR2-108A0A075B7D4 117 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 LOC102724200A0A096LPH7 203 aaPredicted RBP6.15□□□□□ -1.42
HDAC6-221ENST00000477561 TRAV1-1A0A0B4J248 108 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 RAB19A4D1S5 217 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 OR4C46A6NHA9 309 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 IGKV1-17P01599 117 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 CDC34P49427 236 aaPredicted RBP6.15□□□□□ -1.42
HDAC6-221ENST00000477561 FHITP49789 147 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 RHOBP62745 196 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 RPL11P62913 178 aaKnown RBP6.15□□□□□ -1.42
HDAC6-221ENST00000477561 ZNF124Q15973 351 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 ODF3L2Q3SX64 289 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 ZFAND6Q6FIF0 208 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 FAM122CQ6P4D5 195 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 UQCC3Q6UW78 93 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 S100A7AQ86SG5 101 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 APRG1Q8IVJ8 170 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 LINC00528Q8N1L1 170 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 LYPD6BQ8NI32 183 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 SFT2D1Q8WV19 159 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 MBD3L1Q8WWY6 194 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 PFDN5Q99471 154 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 PBDC1Q9BVG4 233 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 VSIRQ9H7M9 311 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 EDA2RQ9HAV5 297 aa6.15□□□□□ -1.42
HDAC6-221ENST00000477561 RYR3Q15413 4870 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 IGKV1D-37A0A075B6S9 117 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 ELOA3CA0A087WX78 387 aaPredicted RBP6.14□□□□□ -1.43
HDAC6-221ENST00000477561 MAP1LC3B2A6NCE7 125 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 C3orf84H3BNL1 204 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 COX7A2P2O60397 106 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 ATP6V1G1O75348 118 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 IFNA1P01562 189 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 LINC00869P0C866 280 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 IGLC1P0CG04 106 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 RPL35AP18077 110 aaKnown RBP6.14□□□□□ -1.43
HDAC6-221ENST00000477561 NPPCP23582 126 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms