RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 SIGMAR1Q99720 223 aa12.22□□□□□ -0.45
CLSTN1-205ENST00000477264 NCR2O95944 276 aa12.22□□□□□ -0.45
CLSTN1-205ENST00000477264 CT45A6P0DMU7 189 aa12.22□□□□□ -0.45
CLSTN1-205ENST00000477264 CT45A5P0DMU8 189 aa12.22□□□□□ -0.45
CLSTN1-205ENST00000477264 CT45A7P0DMV0 189 aa12.22□□□□□ -0.45
CLSTN1-205ENST00000477264 Q6ZT83 130 aa12.22□□□□□ -0.45
CLSTN1-205ENST00000477264 BHLHA15Q7RTS1 189 aaPredicted RBP12.22□□□□□ -0.45
CLSTN1-205ENST00000477264 NPIPB3Q92617 1050 aa12.22□□□□□ -0.45
CLSTN1-205ENST00000477264 MBD3L4A6NDZ8 208 aaPredicted RBP12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 MBD3L3A6NE82 208 aaPredicted RBP12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 MBD3L5A6NJ08 208 aaPredicted RBP12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 SNAI2O43623 268 aa12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 LYZL6O75951 148 aa12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 FABP6P51161 128 aa12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 SSBP2P81877 361 aaPredicted RBP12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 OR10W1Q8NGF6 305 aa12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 MBD3L2Q8NHZ7 208 aaPredicted RBP12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 BLNKQ8WV28 456 aa12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 ZC2HC1AQ96GY0 325 aa12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 TRGV9Q99603 122 aa12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 Q9H3A6 140 aa12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 OTORQ9NRC9 128 aa12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 SIGLEC8Q9NYZ4 499 aa12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 HIGD1BQ9P298 99 aa12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 PIEZO2Q9H5I5 2752 aa12.21□□□□□ -0.45
CLSTN1-205ENST00000477264 SMIM13P0DJ93 91 aa12.2□□□□□ -0.46
CLSTN1-205ENST00000477264 GP9P14770 177 aa12.2□□□□□ -0.46
CLSTN1-205ENST00000477264 KIR2DL2P43627 348 aaPredicted RBP12.2□□□□□ -0.46
CLSTN1-205ENST00000477264 FOXE3Q13461 319 aa12.2□□□□□ -0.46
CLSTN1-205ENST00000477264 FAM57AQ8TBR7 257 aa12.2□□□□□ -0.46
CLSTN1-205ENST00000477264 THYN1Q9P016 225 aa12.2□□□□□ -0.46
CLSTN1-205ENST00000477264 HILPDAQ9Y5L2 63 aa12.2□□□□□ -0.46
CLSTN1-205ENST00000477264 IGKV1-16P04430 117 aa12.2□□□□□ -0.46
CLSTN1-205ENST00000477264 HOXB4P17483 251 aaPredicted RBP12.2□□□□□ -0.46
CLSTN1-205ENST00000477264 SAMD5Q5TGI4 173 aa12.2□□□□□ -0.46
CLSTN1-205ENST00000477264 ZNRF1Q8ND25 227 aa12.2□□□□□ -0.46
CLSTN1-205ENST00000477264 TMEM167AQ8TBQ9 72 aa12.2□□□□□ -0.46
CLSTN1-205ENST00000477264 HARBI1Q96MB7 349 aa12.2□□□□□ -0.46
CLSTN1-205ENST00000477264 SHISA9B4DS77 424 aa12.19□□□□□ -0.46
CLSTN1-205ENST00000477264 PRRG2O14669 202 aa12.19□□□□□ -0.46
CLSTN1-205ENST00000477264 ZNF493Q6ZR52 646 aa12.19□□□□□ -0.46
CLSTN1-205ENST00000477264 ZNF833PQ6ZTB9 187 aa12.19□□□□□ -0.46
CLSTN1-205ENST00000477264 OR8A1Q8NGG7 326 aa12.19□□□□□ -0.46
CLSTN1-205ENST00000477264 RPUSD1Q9UJJ7 312 aaKnown RBP12.19□□□□□ -0.46
CLSTN1-205ENST00000477264 TIMM8BQ9Y5J9 83 aaPredicted RBP12.19□□□□□ -0.46
CLSTN1-205ENST00000477264 TNCP24821 2201 aa12.19□□□□□ -0.46
CLSTN1-205ENST00000477264 GNG7O60262 68 aa12.19□□□□□ -0.46
CLSTN1-205ENST00000477264 PRR31Q5SQ13 230 aa12.19□□□□□ -0.46
CLSTN1-205ENST00000477264 GFRALQ6UXV0 394 aa12.19□□□□□ -0.46
CLSTN1-205ENST00000477264 PROCRQ9UNN8 238 aa12.19□□□□□ -0.46
CLSTN1-205ENST00000477264 IGHV3OR15-7A0A075B7D8 119 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 PPIAL4CA0A0B4J2A2 164 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 OVOL3O00110 214 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 HBDP02042 147 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 CECR9P0C854 216 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 AZU1P20160 251 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 FOXI2Q6ZQN5 318 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 ZNF414Q96IQ9 312 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 SGK494Q96LW2 274 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 FAM215AQ9Y5M1 114 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 NCOR2Q9Y618 2525 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 A0A096LNJ9 63 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 TEX48A0A1B0GUV7 120 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 IGLV1-44P01699 117 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 RPL24P83731 157 aaKnown RBP12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 UTF1Q5T230 341 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 SEM1Q6ZVN7 128 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 RAB37Q96AX2 223 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 ATP6V0BQ99437 205 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 U3KQK5 164 aa12.18□□□□□ -0.46
CLSTN1-205ENST00000477264 BSNQ9UPA5 3926 aa12.17□□□□□ -0.46
CLSTN1-205ENST00000477264 MAP1BP46821 2468 aaKnown RBP12.17□□□□□ -0.46
CLSTN1-205ENST00000477264 PLAUP00749 431 aa12.17□□□□□ -0.46
CLSTN1-205ENST00000477264 LHBP01229 141 aa12.17□□□□□ -0.46
CLSTN1-205ENST00000477264 ARMS2P0C7Q2 107 aa12.17□□□□□ -0.46
CLSTN1-205ENST00000477264 CACNG7P62955 275 aa12.17□□□□□ -0.46
CLSTN1-205ENST00000477264 CD300EQ496F6 205 aaPredicted RBP12.17□□□□□ -0.46
CLSTN1-205ENST00000477264 TMEM14CQ9P0S9 112 aa12.17□□□□□ -0.46
CLSTN1-205ENST00000477264 FZR1Q9UM11 496 aa12.17□□□□□ -0.46
CLSTN1-205ENST00000477264 INSIG2Q9Y5U4 225 aa12.17□□□□□ -0.46
CLSTN1-205ENST00000477264 ZNF207O43670 478 aaKnown RBP12.16□□□□□ -0.46
CLSTN1-205ENST00000477264 CRYGCP07315 174 aa12.16□□□□□ -0.46
CLSTN1-205ENST00000477264 ORM2P19652 201 aa12.16□□□□□ -0.46
CLSTN1-205ENST00000477264 KLRB1Q12918 225 aa12.16□□□□□ -0.46
CLSTN1-205ENST00000477264 TMEM75Q8N9X5 138 aa12.16□□□□□ -0.46
CLSTN1-205ENST00000477264 SPATA25Q9BR10 227 aa12.16□□□□□ -0.46
CLSTN1-205ENST00000477264 INTS1Q8N201 2190 aaKnown RBP12.16□□□□□ -0.46
CLSTN1-205ENST00000477264 LINC01559Q495D7 138 aa12.16□□□□□ -0.46
CLSTN1-205ENST00000477264 VGLL1Q99990 258 aa12.16□□□□□ -0.46
CLSTN1-205ENST00000477264 NAA38Q9BRA0 125 aaKnown RBP12.16□□□□□ -0.46
CLSTN1-205ENST00000477264 RAI1Q7Z5J4 1906 aaPredicted RBP12.16□□□□□ -0.46
CLSTN1-205ENST00000477264 CACNA1AO00555 2505 aa12.15□□□□□ -0.46
CLSTN1-205ENST00000477264 PPIAL4EA0A075B759 164 aa12.15□□□□□ -0.46
CLSTN1-205ENST00000477264 F8W1H4 67 aa12.15□□□□□ -0.46
CLSTN1-205ENST00000477264 PPIAL4FP0DN26 164 aa12.15□□□□□ -0.46
CLSTN1-205ENST00000477264 HLA-DRB4P13762 266 aa12.15□□□□□ -0.46
CLSTN1-205ENST00000477264 WT1-ASQ06250 92 aa12.15□□□□□ -0.46
CLSTN1-205ENST00000477264 PRR30Q53SZ7 412 aaPredicted RBP12.15□□□□□ -0.46
CLSTN1-205ENST00000477264 PVRIGQ6DKI7 326 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms