RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 HES1Q14469 280 aa12.98□□□□□ -0.33
TMEM53-208ENST00000476724 MINOS1Q5TGZ0 78 aa12.98□□□□□ -0.33
TMEM53-208ENST00000476724 ZNF562Q6V9R5 426 aa12.98□□□□□ -0.33
TMEM53-208ENST00000476724 IGFBPL1Q8WX77 278 aa12.98□□□□□ -0.33
TMEM53-208ENST00000476724 DAZAP1Q96EP5 407 aaKnown RBP12.98□□□□□ -0.33
TMEM53-208ENST00000476724 ZNF48Q96MX3 618 aaPredicted RBP12.98□□□□□ -0.33
TMEM53-208ENST00000476724 MINOS1-NBL1R4GNA1 71 aa12.98□□□□□ -0.33
TMEM53-208ENST00000476724 FAM231BA6NCW3 169 aa12.98□□□□□ -0.33
TMEM53-208ENST00000476724 H3BRN7 92 aa12.98□□□□□ -0.33
TMEM53-208ENST00000476724 OR2J3O76001 311 aa12.98□□□□□ -0.33
TMEM53-208ENST00000476724 P01737 135 aa12.98□□□□□ -0.33
TMEM53-208ENST00000476724 SLAQ13239 276 aa12.98□□□□□ -0.33
TMEM53-208ENST00000476724 KLRD1Q13241 179 aa12.98□□□□□ -0.33
TMEM53-208ENST00000476724 TEX43Q6ZNM6 134 aa12.98□□□□□ -0.33
TMEM53-208ENST00000476724 OR4F17Q8NGA8 305 aa12.98□□□□□ -0.33
TMEM53-208ENST00000476724 A0A1W2PS18 150 aa12.97□□□□□ -0.33
TMEM53-208ENST00000476724 TOMM20LQ6UXN7 152 aa12.97□□□□□ -0.33
TMEM53-208ENST00000476724 ZNF491Q8N8L2 437 aa12.97□□□□□ -0.33
TMEM53-208ENST00000476724 SGK494Q96LW2 274 aa12.97□□□□□ -0.33
TMEM53-208ENST00000476724 SPOCK3Q9BQ16 436 aa12.97□□□□□ -0.33
TMEM53-208ENST00000476724 TACC2O95359 2948 aa12.97□□□□□ -0.33
TMEM53-208ENST00000476724 UBR5O95071 2799 aaPredicted RBP12.97□□□□□ -0.33
TMEM53-208ENST00000476724 A0A1B0GXF2 115 aa12.97□□□□□ -0.33
TMEM53-208ENST00000476724 IGHV4-39P01824 125 aa12.97□□□□□ -0.33
TMEM53-208ENST00000476724 HOXB4P17483 251 aaPredicted RBP12.97□□□□□ -0.33
TMEM53-208ENST00000476724 AMTP48728 403 aa12.97□□□□□ -0.33
TMEM53-208ENST00000476724 EBI3Q14213 229 aa12.97□□□□□ -0.33
TMEM53-208ENST00000476724 RNF125Q96EQ8 232 aa12.97□□□□□ -0.33
TMEM53-208ENST00000476724 TRBV19A0A075B6N1 114 aa12.96□□□□□ -0.33
TMEM53-208ENST00000476724 WI2-2373I1.2A0A1W2PRP0 233 aa12.96□□□□□ -0.33
TMEM53-208ENST00000476724 H3BTX0 84 aa12.96□□□□□ -0.33
TMEM53-208ENST00000476724 ZNF324O75467 553 aaPredicted RBP12.96□□□□□ -0.33
TMEM53-208ENST00000476724 MFAP4P55083 255 aa12.96□□□□□ -0.33
TMEM53-208ENST00000476724 KLF5Q13887 457 aaPredicted RBP12.96□□□□□ -0.33
TMEM53-208ENST00000476724 VMO1Q7Z5L0 202 aa12.96□□□□□ -0.33
TMEM53-208ENST00000476724 Q86TA4 180 aa12.96□□□□□ -0.33
TMEM53-208ENST00000476724 TTC9CQ8N5M4 171 aa12.96□□□□□ -0.33
TMEM53-208ENST00000476724 OR4B1Q8NGF8 309 aa12.96□□□□□ -0.33
TMEM53-208ENST00000476724 C2orf88Q9BSF0 95 aa12.96□□□□□ -0.33
TMEM53-208ENST00000476724 BPESC1Q9GZL8 116 aa12.96□□□□□ -0.33
TMEM53-208ENST00000476724 THYN1Q9P016 225 aa12.96□□□□□ -0.33
TMEM53-208ENST00000476724 TBL2Q9Y4P3 447 aaKnown RBP12.96□□□□□ -0.33
TMEM53-208ENST00000476724 IGLV11-55A0A075B6I3 123 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 K7EQM0 130 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 GNG7O60262 68 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 ZFP36P26651 326 aaKnown RBP12.95□□□□□ -0.34
TMEM53-208ENST00000476724 C18orf32Q8TCD1 76 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 ARPC1AQ92747 370 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 RCHY1Q96PM5 261 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 CCL19Q99731 98 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 FAM103A1Q9BTL3 118 aaKnown RBP12.95□□□□□ -0.34
TMEM53-208ENST00000476724 NRN1Q9NPD7 142 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 A1L4Q6 167 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 NPIPB6E9PJ23 425 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 GOSR1O95249 250 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 IGLC2P0DOY2 106 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 HBBP68871 147 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 ASPHD1Q5U4P2 390 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 LINC00322Q6ZN03 302 aaPredicted RBP12.95□□□□□ -0.34
TMEM53-208ENST00000476724 Q8N6K4 173 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 C20orf144Q9BQM9 153 aa12.95□□□□□ -0.34
TMEM53-208ENST00000476724 IL4P05112 153 aa12.94□□□□□ -0.34
TMEM53-208ENST00000476724 CD33P20138 364 aa12.94□□□□□ -0.34
TMEM53-208ENST00000476724 GDF5OSQ5U4N7 250 aa12.94□□□□□ -0.34
TMEM53-208ENST00000476724 LINC00469Q8N7U9 141 aa12.94□□□□□ -0.34
TMEM53-208ENST00000476724 TMEM75Q8N9X5 138 aa12.94□□□□□ -0.34
TMEM53-208ENST00000476724 FANCD2OSQ96PS1 177 aa12.94□□□□□ -0.34
TMEM53-208ENST00000476724 ZFP30Q9Y2G7 519 aa12.94□□□□□ -0.34
TMEM53-208ENST00000476724 SVEP1Q4LDE5 3571 aa12.94□□□□□ -0.34
TMEM53-208ENST00000476724 ASH1LQ9NR48 2969 aaKnown RBP12.94□□□□□ -0.34
TMEM53-208ENST00000476724 MED13LQ71F56 2210 aa12.94□□□□□ -0.34
TMEM53-208ENST00000476724 SCGB2A1O75556 95 aa12.93□□□□□ -0.34
TMEM53-208ENST00000476724 IGLV2-11P01706 119 aa12.93□□□□□ -0.34
TMEM53-208ENST00000476724 CD24P25063 80 aa12.93□□□□□ -0.34
TMEM53-208ENST00000476724 FAM162BQ5T6X4 162 aa12.93□□□□□ -0.34
TMEM53-208ENST00000476724 RBPMS2Q6ZRY4 209 aaKnown RBP12.93□□□□□ -0.34
TMEM53-208ENST00000476724 GOLT1AQ6ZVE7 132 aa12.93□□□□□ -0.34
TMEM53-208ENST00000476724 EXOC3-AS1Q8N2X6 119 aa12.93□□□□□ -0.34
TMEM53-208ENST00000476724 VN1R17PQ8TDU5 208 aa12.93□□□□□ -0.34
TMEM53-208ENST00000476724 ALKBH7Q9BT30 221 aaPredicted RBP12.93□□□□□ -0.34
TMEM53-208ENST00000476724 FBXL7Q9UJT9 491 aa12.93□□□□□ -0.34
TMEM53-208ENST00000476724 NCBP2LA6PVI3 153 aaKnown RBP12.93□□□□□ -0.34
TMEM53-208ENST00000476724 VWC2LB2RUY7 222 aa12.93□□□□□ -0.34
TMEM53-208ENST00000476724 COL8A1P27658 744 aa12.93□□□□□ -0.34
TMEM53-208ENST00000476724 CAMPP49913 170 aa12.93□□□□□ -0.34
TMEM53-208ENST00000476724 PDE6HQ13956 83 aa12.93□□□□□ -0.34
TMEM53-208ENST00000476724 NRGNQ92686 78 aa12.93□□□□□ -0.34
TMEM53-208ENST00000476724 A0A1W2PRD5 423 aa12.92□□□□□ -0.34
TMEM53-208ENST00000476724 A0A1W2PRF3 423 aa12.92□□□□□ -0.34
TMEM53-208ENST00000476724 A0A1W2PRM7 423 aa12.92□□□□□ -0.34
TMEM53-208ENST00000476724 HLA-DRB1P01911 266 aa12.92□□□□□ -0.34
TMEM53-208ENST00000476724 PMCHP20382 165 aa12.92□□□□□ -0.34
TMEM53-208ENST00000476724 TCF24Q7RTU0 167 aa12.92□□□□□ -0.34
TMEM53-208ENST00000476724 VAMP8Q9BV40 100 aa12.92□□□□□ -0.34
TMEM53-208ENST00000476724 SIRPDQ9H106 197 aa12.92□□□□□ -0.34
TMEM53-208ENST00000476724 C1RLQ9NZP8 487 aa12.92□□□□□ -0.34
TMEM53-208ENST00000476724 FAM208BQ5VWN6 2430 aa12.92□□□□□ -0.34
TMEM53-208ENST00000476724 MRPS12O15235 138 aaKnown RBP12.92□□□□□ -0.34
TMEM53-208ENST00000476724 FCGR2BP31994 310 aaPredicted RBP12.92□□□□□ -0.34
TMEM53-208ENST00000476724 KRTDAPP60985 99 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms