RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 RPL11P62913 178 aaKnown RBP16.62■□□□□ 0.25
MCF2L2-209ENST00000475664 C9orf62Q8N4C0 152 aa16.62■□□□□ 0.25
MCF2L2-209ENST00000475664 GNPNAT1Q96EK6 184 aaPredicted RBP16.62■□□□□ 0.25
MCF2L2-209ENST00000475664 PRR25Q96S07 402 aa16.62■□□□□ 0.25
MCF2L2-209ENST00000475664 GPR82Q96P67 336 aa16.61■□□□□ 0.25
MCF2L2-209ENST00000475664 MS4A6AQ9H2W1 248 aa16.61■□□□□ 0.25
MCF2L2-209ENST00000475664 RNF24Q9Y225 148 aa16.61■□□□□ 0.25
MCF2L2-209ENST00000475664 GBGT1Q8N5D6 347 aa16.6■□□□□ 0.25
MCF2L2-209ENST00000475664 ZNF471Q9BX82 626 aaPredicted RBP16.6■□□□□ 0.25
MCF2L2-209ENST00000475664 AURKAIP1Q9NWT8 199 aaPredicted RBP16.6■□□□□ 0.25
MCF2L2-209ENST00000475664 TRAV2A0A0B4J234 112 aa16.59■□□□□ 0.25
MCF2L2-209ENST00000475664 OR4C46A6NHA9 309 aa16.59■□□□□ 0.25
MCF2L2-209ENST00000475664 PRB2P02812 416 aaPredicted RBP16.59■□□□□ 0.25
MCF2L2-209ENST00000475664 RPL7P18124 248 aaKnown RBP16.59■□□□□ 0.25
MCF2L2-209ENST00000475664 PAFAH1B2P68402 229 aa16.59■□□□□ 0.25
MCF2L2-209ENST00000475664 SERF2P84101 59 aa16.59■□□□□ 0.25
MCF2L2-209ENST00000475664 FAM78BQ5VT40 261 aa16.59■□□□□ 0.25
MCF2L2-209ENST00000475664 STXBP6Q8NFX7 210 aa16.59■□□□□ 0.25
MCF2L2-209ENST00000475664 SEPSECSQ9HD40 501 aaKnown RBP16.59■□□□□ 0.25
MCF2L2-209ENST00000475664 SMAD5-AS1Q9Y6J3 95 aa16.59■□□□□ 0.25
MCF2L2-209ENST00000475664 TRAV5A0A0B4J249 113 aa16.58■□□□□ 0.24
MCF2L2-209ENST00000475664 MRPS12O15235 138 aaKnown RBP16.58■□□□□ 0.24
MCF2L2-209ENST00000475664 M6PRP20645 277 aa16.58■□□□□ 0.24
MCF2L2-209ENST00000475664 GALR1P47211 349 aa16.58■□□□□ 0.24
MCF2L2-209ENST00000475664 TFPI2P48307 235 aa16.58■□□□□ 0.24
MCF2L2-209ENST00000475664 RAB2AP61019 212 aa16.58■□□□□ 0.24
MCF2L2-209ENST00000475664 ACOT6Q3I5F7 207 aaPredicted RBP16.58■□□□□ 0.24
MCF2L2-209ENST00000475664 SPATA31B1PQ5VZV4 182 aa16.58■□□□□ 0.24
MCF2L2-209ENST00000475664 DCANP1Q8TF63 244 aa16.58■□□□□ 0.24
MCF2L2-209ENST00000475664 MRPL32Q9BYC8 188 aaKnown RBP16.58■□□□□ 0.24
MCF2L2-209ENST00000475664 NRN1Q9NPD7 142 aa16.58■□□□□ 0.24
MCF2L2-209ENST00000475664 K7EQG2 157 aa16.57■□□□□ 0.24
MCF2L2-209ENST00000475664 DNASE2O00115 360 aaPredicted RBP16.57■□□□□ 0.24
MCF2L2-209ENST00000475664 SPP1P10451 314 aa16.57■□□□□ 0.24
MCF2L2-209ENST00000475664 MIR17HGQ75NE6 70 aa16.57■□□□□ 0.24
MCF2L2-209ENST00000475664 Q8N1Y9 231 aa16.57■□□□□ 0.24
MCF2L2-209ENST00000475664 C17orf77Q96MU5 243 aa16.57■□□□□ 0.24
MCF2L2-209ENST00000475664 FUT9Q9Y231 359 aa16.57■□□□□ 0.24
MCF2L2-209ENST00000475664 CD7P09564 240 aa16.56■□□□□ 0.24
MCF2L2-209ENST00000475664 NKX2-5P52952 324 aaPredicted RBP16.56■□□□□ 0.24
MCF2L2-209ENST00000475664 CD81P60033 236 aa16.56■□□□□ 0.24
MCF2L2-209ENST00000475664 EIF5AP63241 154 aaKnown RBP16.56■□□□□ 0.24
MCF2L2-209ENST00000475664 GTSCR1Q86UQ5 136 aa16.56■□□□□ 0.24
MCF2L2-209ENST00000475664 WFDC3Q8IUB2 231 aa16.56■□□□□ 0.24
MCF2L2-209ENST00000475664 STOML3Q8TAV4 291 aa16.56■□□□□ 0.24
MCF2L2-209ENST00000475664 RHOBP62745 196 aa16.55■□□□□ 0.24
MCF2L2-209ENST00000475664 BPIFA4PQ86YQ2 179 aa16.55■□□□□ 0.24
MCF2L2-209ENST00000475664 FAM24BQ8N5W8 94 aa16.55■□□□□ 0.24
MCF2L2-209ENST00000475664 OR10G4Q8NGN3 311 aa16.55■□□□□ 0.24
MCF2L2-209ENST00000475664 OR10G9Q8NGN4 311 aa16.55■□□□□ 0.24
MCF2L2-209ENST00000475664 OR10G7Q8NGN6 311 aa16.55■□□□□ 0.24
MCF2L2-209ENST00000475664 FAM167A-AS1Q96KT0 104 aa16.55■□□□□ 0.24
MCF2L2-209ENST00000475664 SLC25A2Q9BXI2 301 aa16.55■□□□□ 0.24
MCF2L2-209ENST00000475664 A0A087X0K7 114 aa16.54■□□□□ 0.24
MCF2L2-209ENST00000475664 MBP02144 154 aa16.54■□□□□ 0.24
MCF2L2-209ENST00000475664 TPT1P13693 172 aaKnown RBP16.54■□□□□ 0.24
MCF2L2-209ENST00000475664 ODF3L2Q3SX64 289 aa16.54■□□□□ 0.24
MCF2L2-209ENST00000475664 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.54■□□□□ 0.24
MCF2L2-209ENST00000475664 BAP18Q8IXM2 172 aa16.54■□□□□ 0.24
MCF2L2-209ENST00000475664 C19orf73Q9NVV2 129 aa16.54■□□□□ 0.24
MCF2L2-209ENST00000475664 K7EIL1 84 aa16.53■□□□□ 0.24
MCF2L2-209ENST00000475664 SOCS3O14543 225 aa16.53■□□□□ 0.24
MCF2L2-209ENST00000475664 SEC11BP0C7V7 166 aa16.53■□□□□ 0.24
MCF2L2-209ENST00000475664 IGLC2P0DOY2 106 aa16.53■□□□□ 0.24
MCF2L2-209ENST00000475664 ATF4P18848 351 aaPredicted RBP16.53■□□□□ 0.24
MCF2L2-209ENST00000475664 MEOX2P50222 304 aa16.53■□□□□ 0.24
MCF2L2-209ENST00000475664 TMEM41BQ5BJD5 291 aa16.53■□□□□ 0.24
MCF2L2-209ENST00000475664 FAM122CQ6P4D5 195 aa16.53■□□□□ 0.24
MCF2L2-209ENST00000475664 RPP25LQ8N5L8 163 aaKnown RBP16.53■□□□□ 0.24
MCF2L2-209ENST00000475664 RPRMQ9NS64 109 aa16.53■□□□□ 0.24
MCF2L2-209ENST00000475664 TMEM14CQ9P0S9 112 aa16.53■□□□□ 0.24
MCF2L2-209ENST00000475664 C4BPBP20851 252 aa16.52■□□□□ 0.24
MCF2L2-209ENST00000475664 SLC51BQ86UW2 128 aa16.52■□□□□ 0.24
MCF2L2-209ENST00000475664 FAM110AQ9BQ89 295 aa16.52■□□□□ 0.24
MCF2L2-209ENST00000475664 DEFA6Q01524 100 aa16.51■□□□□ 0.23
MCF2L2-209ENST00000475664 SAMD13Q5VXD3 122 aa16.51■□□□□ 0.23
MCF2L2-209ENST00000475664 WFDC10AQ9H1F0 79 aa16.51■□□□□ 0.23
MCF2L2-209ENST00000475664 MAP6D1Q9H9H5 199 aa16.51■□□□□ 0.23
MCF2L2-209ENST00000475664 UBQLN2Q9UHD9 624 aa16.51■□□□□ 0.23
MCF2L2-209ENST00000475664 A0A1W2PPV4 95 aa16.5■□□□□ 0.23
MCF2L2-209ENST00000475664 H3BQ15 152 aa16.5■□□□□ 0.23
MCF2L2-209ENST00000475664 EIF3GO75821 320 aaKnown RBP eCLIP16.5■□□□□ 0.23
MCF2L2-209ENST00000475664 ZNF688P0C7X2 276 aa16.5■□□□□ 0.23
MCF2L2-209ENST00000475664 PYYP10082 97 aa16.5■□□□□ 0.23
MCF2L2-209ENST00000475664 CDC34P49427 236 aaPredicted RBP16.5■□□□□ 0.23
MCF2L2-209ENST00000475664 AKR1C8PQ5T2L2 129 aa16.5■□□□□ 0.23
MCF2L2-209ENST00000475664 HRH4Q9H3N8 390 aa16.5■□□□□ 0.23
MCF2L2-209ENST00000475664 PLA2G2EQ9NZK7 142 aa16.5■□□□□ 0.23
MCF2L2-209ENST00000475664 FBN3Q75N90 2809 aa16.5■□□□□ 0.23
MCF2L2-209ENST00000475664 MEGF8Q7Z7M0 2845 aa16.5■□□□□ 0.23
MCF2L2-209ENST00000475664 OR11H12B2RN74 326 aa16.49■□□□□ 0.23
MCF2L2-209ENST00000475664 SNRPCP09234 159 aaKnown RBP16.49■□□□□ 0.23
MCF2L2-209ENST00000475664 PSMB3P49720 205 aa16.49■□□□□ 0.23
MCF2L2-209ENST00000475664 CMC4P56277 68 aaPredicted RBP16.49■□□□□ 0.23
MCF2L2-209ENST00000475664 TAS2R45P59539 299 aa16.49■□□□□ 0.23
MCF2L2-209ENST00000475664 KHDC3LQ587J8 217 aa16.49■□□□□ 0.23
MCF2L2-209ENST00000475664 TMED6Q8WW62 240 aa16.49■□□□□ 0.23
MCF2L2-209ENST00000475664 ZNF503Q96F45 646 aa16.49■□□□□ 0.23
MCF2L2-209ENST00000475664 BOLA2-SMG1P6H3BVE0 249 aa16.48■□□□□ 0.23
MCF2L2-209ENST00000475664 ISLRO14498 428 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms