RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	DEFA1	P59665	94 aa		12.03	□□□□□ -0.48
VPS8-222	ENST00000475580	DEFA3	P59666	94 aa		12.03	□□□□□ -0.48
VPS8-222	ENST00000475580	RAP2B	P61225	183 aa		12.03	□□□□□ -0.48
VPS8-222	ENST00000475580	VWC2	Q2TAL6	325 aa		12.03	□□□□□ -0.48
VPS8-222	ENST00000475580	FOXI2	Q6ZQN5	318 aa		12.03	□□□□□ -0.48
VPS8-222	ENST00000475580	TMEM252	Q8N6L7	170 aa		12.03	□□□□□ -0.48
VPS8-222	ENST00000475580	TMEM217	Q8N7C4	229 aa		12.03	□□□□□ -0.48
VPS8-222	ENST00000475580	ARL6	Q9H0F7	186 aa		12.03	□□□□□ -0.48
VPS8-222	ENST00000475580	C11orf68	Q9H3H3	251 aa	Known RBP	12.03	□□□□□ -0.48
VPS8-222	ENST00000475580	SAV1	Q9H4B6	383 aa	Predicted RBP	12.03	□□□□□ -0.48
VPS8-222	ENST00000475580	CLEC5A	Q9NY25	188 aa		12.03	□□□□□ -0.48
VPS8-222	ENST00000475580	ALMS1	Q8TCU4	4167 aa		12.03	□□□□□ -0.48
VPS8-222	ENST00000475580	DNAH1	Q9P2D7	4330 aa		12.02	□□□□□ -0.48
VPS8-222	ENST00000475580	ZNF705E	A8MWA4	302 aa	Predicted RBP	12.02	□□□□□ -0.49
VPS8-222	ENST00000475580	MEOX2	P50222	304 aa		12.02	□□□□□ -0.49
VPS8-222	ENST00000475580	ZNF546	Q86UE3	836 aa		12.02	□□□□□ -0.49
VPS8-222	ENST00000475580		Q8NAQ8	132 aa		12.02	□□□□□ -0.49
VPS8-222	ENST00000475580	ARV1	Q9H2C2	271 aa		12.02	□□□□□ -0.49
VPS8-222	ENST00000475580	WDR83OS	Q9Y284	106 aa		12.02	□□□□□ -0.49
VPS8-222	ENST00000475580		X6R8D5	127 aa		12.02	□□□□□ -0.49
VPS8-222	ENST00000475580	HYDIN	Q4G0P3	5121 aa		12.01	□□□□□ -0.49
VPS8-222	ENST00000475580	TRAV8-2	A0A0B4J237	113 aa		12.01	□□□□□ -0.49
VPS8-222	ENST00000475580		F6UB75	175 aa		12.01	□□□□□ -0.49
VPS8-222	ENST00000475580		H0YIZ8	118 aa		12.01	□□□□□ -0.49
VPS8-222	ENST00000475580	MRPS12	O15235	138 aa	Known RBP	12.01	□□□□□ -0.49
VPS8-222	ENST00000475580	DEFB4A	O15263	64 aa		12.01	□□□□□ -0.49
VPS8-222	ENST00000475580	S100A7	P31151	101 aa		12.01	□□□□□ -0.49
VPS8-222	ENST00000475580	PMS2P11	Q13670	270 aa		12.01	□□□□□ -0.49
VPS8-222	ENST00000475580	PXDC1	Q5TGL8	231 aa		12.01	□□□□□ -0.49
VPS8-222	ENST00000475580	SAMD13	Q5VXD3	122 aa		12.01	□□□□□ -0.49
VPS8-222	ENST00000475580	C16orf92	Q96LL3	132 aa		12.01	□□□□□ -0.49
VPS8-222	ENST00000475580	NMES1	Q9C002	83 aa		12.01	□□□□□ -0.49
VPS8-222	ENST00000475580		A0A0J9YX75	114 aa		12	□□□□□ -0.49
VPS8-222	ENST00000475580	RPL7	P18124	248 aa	Known RBP	12	□□□□□ -0.49
VPS8-222	ENST00000475580	CAMLG	P49069	296 aa		12	□□□□□ -0.49
VPS8-222	ENST00000475580	H2BFS	P57053	126 aa		12	□□□□□ -0.49
VPS8-222	ENST00000475580	ZNF709	Q8N972	641 aa		12	□□□□□ -0.49
VPS8-222	ENST00000475580	TMEM37	Q8WXS4	190 aa		12	□□□□□ -0.49
VPS8-222	ENST00000475580	CLUHP3	Q96NS8	147 aa		12	□□□□□ -0.49
VPS8-222	ENST00000475580	UQCC1	Q9NVA1	299 aa		12	□□□□□ -0.49
VPS8-222	ENST00000475580	OR5AC2	Q9NZP5	309 aa		12	□□□□□ -0.49
VPS8-222	ENST00000475580		A0A087X0K7	114 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	IGHV4-28	A0A0C4DH34	117 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	CXorf65	A6NEN9	183 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	IGKV3-20	P01619	116 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	RBMY1A1	P0DJD3	496 aa	Known RBP	11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	RBMY1C	P0DJD4	496 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	S100A11	P31949	105 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	PRR20E	P86478	221 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	PRR20C	P86479	221 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	PRR20D	P86480	221 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	PRR20B	P86481	221 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	PRR20A	P86496	221 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	RBMY1F	Q15415	496 aa	Known RBP	11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	MORN5	Q5VZ52	161 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	MIC13	Q5XKP0	118 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	IGFL4	Q6B9Z1	124 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	STX12	Q86Y82	276 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	XCL2	Q9UBD3	114 aa		11.99	□□□□□ -0.49
VPS8-222	ENST00000475580	UBE2L5P	A0A1B0GUS4	154 aa		11.98	□□□□□ -0.49
VPS8-222	ENST00000475580		A8MTW9	85 aa		11.98	□□□□□ -0.49
VPS8-222	ENST00000475580	NUTF2	P61970	127 aa	Known RBP	11.98	□□□□□ -0.49
VPS8-222	ENST00000475580	HBG1	P69891	147 aa		11.98	□□□□□ -0.49
VPS8-222	ENST00000475580	HBG2	P69892	147 aa		11.98	□□□□□ -0.49
VPS8-222	ENST00000475580	LRRC37A5P	Q49AS3	106 aa		11.98	□□□□□ -0.49
VPS8-222	ENST00000475580	FAM78B	Q5VT40	261 aa		11.98	□□□□□ -0.49
VPS8-222	ENST00000475580	SPATA31B1P	Q5VZV4	182 aa		11.98	□□□□□ -0.49
VPS8-222	ENST00000475580	LINC00305	Q7Z4B0	112 aa		11.98	□□□□□ -0.49
VPS8-222	ENST00000475580	RNF182	Q8N6D2	247 aa		11.98	□□□□□ -0.49
VPS8-222	ENST00000475580	C1QTNF4	Q9BXJ3	329 aa		11.98	□□□□□ -0.49
VPS8-222	ENST00000475580	RPRM	Q9NS64	109 aa		11.98	□□□□□ -0.49
VPS8-222	ENST00000475580		E5RGE8	158 aa		11.97	□□□□□ -0.49
VPS8-222	ENST00000475580	MIF	P14174	115 aa		11.97	□□□□□ -0.49
VPS8-222	ENST00000475580	FXYD7	P58549	80 aa		11.97	□□□□□ -0.49
VPS8-222	ENST00000475580	NANOS2	P60321	138 aa	Known RBP	11.97	□□□□□ -0.49
VPS8-222	ENST00000475580	CYCS	P99999	105 aa	Known RBP	11.97	□□□□□ -0.49
VPS8-222	ENST00000475580	NHLH2	Q02577	135 aa		11.97	□□□□□ -0.49
VPS8-222	ENST00000475580	FGL1	Q08830	312 aa		11.97	□□□□□ -0.49
VPS8-222	ENST00000475580	OPCML	Q14982	345 aa		11.97	□□□□□ -0.49
VPS8-222	ENST00000475580	ATP6V1F	Q16864	119 aa		11.97	□□□□□ -0.49
VPS8-222	ENST00000475580	EBLN2	Q6P2I7	272 aa		11.97	□□□□□ -0.49
VPS8-222	ENST00000475580	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.97	□□□□□ -0.49
VPS8-222	ENST00000475580	CHAC2	Q8WUX2	184 aa		11.97	□□□□□ -0.49
VPS8-222	ENST00000475580	SLC35B3	Q9H1N7	401 aa		11.97	□□□□□ -0.49
VPS8-222	ENST00000475580	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.96	□□□□□ -0.49
VPS8-222	ENST00000475580	NUPR2	A6NF83	97 aa		11.96	□□□□□ -0.49
VPS8-222	ENST00000475580	SSNA1	O43805	119 aa		11.96	□□□□□ -0.49
VPS8-222	ENST00000475580	COX7A2P2	O60397	106 aa		11.96	□□□□□ -0.49
VPS8-222	ENST00000475580	HLA-DMB	P28068	263 aa		11.96	□□□□□ -0.49
VPS8-222	ENST00000475580	RPL29	P47914	159 aa	Known RBP	11.96	□□□□□ -0.49
VPS8-222	ENST00000475580	BAX	Q07812	192 aa		11.96	□□□□□ -0.49
VPS8-222	ENST00000475580	RAB31	Q13636	194 aa		11.96	□□□□□ -0.49
VPS8-222	ENST00000475580	C10orf113	Q5VZT2	155 aa		11.96	□□□□□ -0.49
VPS8-222	ENST00000475580	AMTN	Q6UX39	209 aa		11.96	□□□□□ -0.49
VPS8-222	ENST00000475580	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.96	□□□□□ -0.49
VPS8-222	ENST00000475580	S100A7A	Q86SG5	101 aa		11.96	□□□□□ -0.49
VPS8-222	ENST00000475580	OR4B1	Q8NGF8	309 aa		11.96	□□□□□ -0.49
VPS8-222	ENST00000475580	C11orf45	Q8TAV5	145 aa		11.96	□□□□□ -0.49
VPS8-222	ENST00000475580	PPP1R1C	Q8WVI7	109 aa		11.96	□□□□□ -0.49
VPS8-222	ENST00000475580	RNF126	Q9BV68	326 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms