RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 SBF1O95248 1867 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 DSPPQ9NZW4 1301 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 TRPM6Q9BX84 2022 aa2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 A0A096LPI6 279 aa2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 E7EQL1 145 aa2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 K7EP13 123 aa2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 MT-ND4LP03901 98 aa2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 HIST1H1AQ02539 215 aaPredicted RBP2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 KLRD1Q13241 179 aa2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 SPCS2Q15005 226 aa2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 SPANXN5Q5MJ07 72 aa2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 LRRC28Q86X40 367 aaPredicted RBP2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 OR8B3Q8NGG8 313 aa2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 ZNF418Q8TF45 676 aaPredicted RBP2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 SMIM3Q9BZL3 60 aa2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 U3KQ87 197 aa2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 OVOS2A0A0J9YW53 1432 aa2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 OVOS2Q6IE36 1432 aa2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 CCDC171Q6TFL3 1326 aa2.66□□□□□ -1.98
SRGAP3-205ENST00000475560 NOTCH3Q9UM47 2321 aa2.65□□□□□ -1.98
SRGAP3-205ENST00000475560 PKD1L2Q7Z442 2459 aa2.65□□□□□ -1.98
SRGAP3-205ENST00000475560 FER1L6Q2WGJ9 1857 aa2.65□□□□□ -1.98
SRGAP3-205ENST00000475560 TRAV3A0A0B4J244 114 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 TRBV27A0A0K0K1C4 114 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 MT-ND6P03923 174 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 PAEPP09466 180 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 EVI2AP22794 236 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 RPL22P35268 128 aaKnown RBP2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 RPL13AP3Q6NVV1 102 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 TSTD1Q8NFU3 115 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 OR5A2Q8NGI9 324 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 OR5H6Q8NGV6 325 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 OR4K15Q8NH41 348 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 NAT14Q8WUY8 206 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 AP1S3Q96PC3 154 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 MCEEQ96PE7 176 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 RETNLBQ9BQ08 111 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 OR5AC2Q9NZP5 309 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 FAM135BQ49AJ0 1406 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 KDM5CP41229 1560 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 GPR179Q6PRD1 2367 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 WDR7Q9Y4E6 1490 aa2.65□□□□□ -1.99
SRGAP3-205ENST00000475560 DLC1Q96QB1 1528 aa2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 ADAMTS7Q9UKP4 1686 aa2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 TRAV1-1A0A0B4J248 108 aa2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 IBA57-AS1B1ANH7 110 aa2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 H3BMG7 143 aa2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 SULT1C4O75897 302 aa2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 IGLV3-19P01714 112 aa2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 ZNF705BP0CI00 300 aaPredicted RBP2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 RNASE2P10153 161 aaKnown RBP2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 MGST1P10620 155 aaKnown RBP2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 TMEM14EPQ6UXP3 125 aa2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 Q6ZTI0 123 aa2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 Q8IYB0 196 aa2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 PRELID3AQ96N28 172 aa2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 GLI3P10071 1580 aa2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 SEC16AO15027 2179 aa2.64□□□□□ -1.99
SRGAP3-205ENST00000475560 UQCRHLA0A096LP55 91 aa2.63□□□□□ -1.99
SRGAP3-205ENST00000475560 OR1I1O60431 355 aa2.63□□□□□ -1.99
SRGAP3-205ENST00000475560 UQCRHP07919 91 aa2.63□□□□□ -1.99
SRGAP3-205ENST00000475560 CRYGSP22914 178 aa2.63□□□□□ -1.99
SRGAP3-205ENST00000475560 RPL26P61254 145 aaKnown RBP2.63□□□□□ -1.99
SRGAP3-205ENST00000475560 GLYATL3Q5SZD4 288 aa2.63□□□□□ -1.99
SRGAP3-205ENST00000475560 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
SRGAP3-205ENST00000475560 LINC00301Q8NCQ3 95 aa2.63□□□□□ -1.99
SRGAP3-205ENST00000475560 MORN4Q8NDC4 146 aa2.63□□□□□ -1.99
SRGAP3-205ENST00000475560 OR4B1Q8NGF8 309 aa2.63□□□□□ -1.99
SRGAP3-205ENST00000475560 DIRC1Q969H9 104 aa2.63□□□□□ -1.99
SRGAP3-205ENST00000475560 RPL26L1Q9UNX3 145 aaKnown RBP2.63□□□□□ -1.99
SRGAP3-205ENST00000475560 KIAA1107Q9UPP5 1409 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 MYH10P35580 1976 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 MALRD1Q5VYJ5 2156 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 M0R2Z0 102 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 P0C880 135 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 DNAJB13P59910 316 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 KRTAP10-5P60370 271 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 TMEM244Q5VVB8 128 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 FAM216BQ8N7L0 139 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 LINC00304Q8N9R0 145 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 POP5Q969H6 163 aaKnown RBP2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 CHCHD1Q96BP2 118 aaKnown RBP2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 SLC50A1Q9BRV3 221 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 TIMM21Q9BVV7 248 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 C14orf132Q9NPU4 83 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 NIT2Q9NQR4 276 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 CALML5Q9NZT1 146 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 LHFPL6Q9Y693 200 aa2.62□□□□□ -1.99
SRGAP3-205ENST00000475560 IBTKQ9P2D0 1353 aaPredicted RBP2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 PRG4Q92954 1404 aaPredicted RBP2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 A0A0G2JQZ4 141 aa2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 SPRR5A0A1B0GTR4 108 aa2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 SDHAF1A6NFY7 115 aa2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 CCDC160A6NGH7 325 aa2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 ZNF705FA8MVS1 300 aaPredicted RBP2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 PRB2P02812 416 aaPredicted RBP2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 BAALC-AS2P0C853 105 aa2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 RAB5CP51148 216 aa2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 HSD17B12Q53GQ0 312 aa2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms