RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 DNAH17Q9UFH2 4485 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 PKD1P98161 4303 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 DNAH6Q9C0G6 4158 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 LOC102723971A0A1B0GUV8 181 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 TMEM189A5PLL7 270 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 ZNF705GA8MUZ8 300 aaPredicted RBP4.96□□□□□ -1.62
HDAC3-207ENST00000475549 M0R2Z0 102 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 MED6O75586 246 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 AZU1P20160 251 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 BTCP35070 178 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 CNN1P51911 297 aaKnown RBP4.96□□□□□ -1.62
HDAC3-207ENST00000475549 AP3S2P59780 193 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 ARL16Q0P5N6 197 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 OXA1LQ15070 435 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 FCN2Q15485 313 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 SPATA31B1PQ5VZV4 182 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 EBLN2Q6P2I7 272 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 PATE2Q6UY27 113 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 LINC00336Q6ZUF6 198 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 TMEM144Q7Z5S9 345 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 CENPSQ8N2Z9 138 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 OR11H7Q8NGC8 314 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 OR4D5Q8NGN0 318 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 OR1B1Q8NGR6 318 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 DEDD2Q8WXF8 326 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 PPP1R14BQ96C90 147 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 IGF2BP2-AS1Q96M15 143 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 UHRF2Q96PU4 802 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 CIB3Q96Q77 187 aaPredicted RBP4.96□□□□□ -1.62
HDAC3-207ENST00000475549 NIPSNAP3BQ9BS92 247 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 SHANK2-AS3Q9BTD1 123 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 SLC25A39Q9BZJ4 359 aaPredicted RBP4.96□□□□□ -1.62
HDAC3-207ENST00000475549 RPRMQ9NS64 109 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 DOK5Q9P104 306 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 SLC45A2Q9UMX9 530 aa4.96□□□□□ -1.62
HDAC3-207ENST00000475549 RYR1P21817 5038 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 IGLV2-18A0A075B6J9 118 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 TRAV12-2A0A075B6T6 113 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 PIGBOS1A0A0B4J2F0 54 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 PRSS29PA6NIE9 313 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 H3BRN7 92 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 MRPS12O15235 138 aaKnown RBP4.95□□□□□ -1.62
HDAC3-207ENST00000475549 NDUFB6O95139 128 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 CFDP00746 253 aaPredicted RBP4.95□□□□□ -1.62
HDAC3-207ENST00000475549 HBE1P02100 147 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 CXCL3P19876 107 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 ANXA7P20073 488 aaKnown RBP4.95□□□□□ -1.62
HDAC3-207ENST00000475549 GALR1P47211 349 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 PLP1P60201 277 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 RPP30P78346 268 aaKnown RBP4.95□□□□□ -1.62
HDAC3-207ENST00000475549 SPINK13Q1W4C9 94 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 RRN3P1Q2M238 152 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 LGALS9BQ3B8N2 356 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 TMEM88Q6PEY1 159 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 TMEM14EPQ6UXP3 125 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 CYP2G1PQ6ZSU1 146 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 BAP18Q8IXM2 172 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 BPIFCQ8NFQ6 507 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 SMIM8Q96KF7 97 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 FAM210BQ96KR6 192 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 C7orf50Q9BRJ6 194 aaKnown RBP4.95□□□□□ -1.62
HDAC3-207ENST00000475549 GOLT1BQ9Y3E0 138 aa4.95□□□□□ -1.62
HDAC3-207ENST00000475549 STRAPQ9Y3F4 350 aaKnown RBP4.95□□□□□ -1.62
HDAC3-207ENST00000475549 SSSCA1O60232 199 aa4.94□□□□□ -1.62
HDAC3-207ENST00000475549 NOL3O60936 208 aaKnown RBP4.94□□□□□ -1.62
HDAC3-207ENST00000475549 HYPMO75409 117 aa4.94□□□□□ -1.62
HDAC3-207ENST00000475549 GHRHP01286 108 aa4.94□□□□□ -1.62
HDAC3-207ENST00000475549 IL5P05113 134 aa4.94□□□□□ -1.62
HDAC3-207ENST00000475549 SNRPCP09234 159 aaKnown RBP4.94□□□□□ -1.62
HDAC3-207ENST00000475549 OR4E1P0C645 316 aa4.94□□□□□ -1.62
HDAC3-207ENST00000475549 HTN3P15516 51 aa4.94□□□□□ -1.62
HDAC3-207ENST00000475549 S100A5P33763 92 aa4.94□□□□□ -1.62
HDAC3-207ENST00000475549 MEOX2P50222 304 aa4.94□□□□□ -1.62
HDAC3-207ENST00000475549 UBE2MP61081 183 aaKnown RBP4.94□□□□□ -1.62
HDAC3-207ENST00000475549 RRAS2P62070 204 aaPredicted RBP4.94□□□□□ -1.62
HDAC3-207ENST00000475549 AKR1C1Q04828 323 aa4.94□□□□□ -1.62
HDAC3-207ENST00000475549 FGL1Q08830 312 aa4.94□□□□□ -1.62
HDAC3-207ENST00000475549 KIR3DS1Q14943 382 aa4.94□□□□□ -1.62
HDAC3-207ENST00000475549 LCE2CQ5TA81 110 aa4.94□□□□□ -1.62
HDAC3-207ENST00000475549 TMEM147Q9BVK8 224 aa4.94□□□□□ -1.62
HDAC3-207ENST00000475549 PSENENQ9NZ42 101 aa4.94□□□□□ -1.62
HDAC3-207ENST00000475549 RCL1Q9Y2P8 373 aaKnown RBP4.94□□□□□ -1.62
HDAC3-207ENST00000475549 ABCA13Q86UQ4 5058 aa4.94□□□□□ -1.62
HDAC3-207ENST00000475549 DYNC1H1Q14204 4646 aaKnown RBP4.93□□□□□ -1.62
HDAC3-207ENST00000475549 DNAH11Q96DT5 4516 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 A0A087X0K7 114 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 LINC00854A0A1B0GVQ3 168 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 SMCO3A2RU48 225 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 C7orf66A4D0T2 115 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 CCDC160A6NGH7 325 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 K7EPK0 472 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 PLA2G10O15496 165 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 IFNA21P01568 189 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 OR5G3P0C626 314 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 METTL15P1P0C7V9 234 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 LINC00869P0C866 280 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 DEFB130BP0DP73 79 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 DEFB130AP0DP74 79 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 TSPOP30536 169 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 SLC38A11Q08AI6 406 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms