RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 RHOBP62745 196 aa14.25□□□□□ -0.13
VPS36-203ENST00000475375 LYZL2Q7Z4W2 148 aa14.25□□□□□ -0.13
VPS36-203ENST00000475375 OR1B1Q8NGR6 318 aa14.25□□□□□ -0.13
VPS36-203ENST00000475375 UHRF2Q96PU4 802 aa14.25□□□□□ -0.13
VPS36-203ENST00000475375 SHPKQ9UHJ6 478 aa14.25□□□□□ -0.13
VPS36-203ENST00000475375 IGKV1OR2-108A0A075B7D4 117 aa14.24□□□□□ -0.13
VPS36-203ENST00000475375 EPM2AB3EWF7 344 aa14.24□□□□□ -0.13
VPS36-203ENST00000475375 AKAIN1P0CW23 69 aa14.24□□□□□ -0.13
VPS36-203ENST00000475375 IAPPP10997 89 aa14.24□□□□□ -0.13
VPS36-203ENST00000475375 AKR1C4P17516 323 aa14.24□□□□□ -0.13
VPS36-203ENST00000475375 SSBP1Q04837 148 aaKnown RBP14.24□□□□□ -0.13
VPS36-203ENST00000475375 OR5I1Q13606 314 aa14.24□□□□□ -0.13
VPS36-203ENST00000475375 OR51S1Q8NGJ8 323 aa14.24□□□□□ -0.13
VPS36-203ENST00000475375 GNPNAT1Q96EK6 184 aaPredicted RBP14.24□□□□□ -0.13
VPS36-203ENST00000475375 C17orf77Q96MU5 243 aa14.24□□□□□ -0.13
VPS36-203ENST00000475375 GPR82Q96P67 336 aa14.24□□□□□ -0.13
VPS36-203ENST00000475375 PRRT1Q99946 306 aa14.24□□□□□ -0.13
VPS36-203ENST00000475375 TMEM147Q9BVK8 224 aa14.24□□□□□ -0.13
VPS36-203ENST00000475375 KRTAP1-5Q9BYS1 174 aa14.24□□□□□ -0.13
VPS36-203ENST00000475375 TIMM8BQ9Y5J9 83 aaPredicted RBP14.24□□□□□ -0.13
VPS36-203ENST00000475375 DMBT1Q9UGM3 2413 aaPredicted RBP14.23□□□□□ -0.13
VPS36-203ENST00000475375 S100A7P31151 101 aa14.23□□□□□ -0.13
VPS36-203ENST00000475375 TAS2R60P59551 318 aa14.23□□□□□ -0.13
VPS36-203ENST00000475375 HIST1H1AQ02539 215 aaPredicted RBP14.23□□□□□ -0.13
VPS36-203ENST00000475375 CLVS1Q8IUQ0 354 aaPredicted RBP14.23□□□□□ -0.13
VPS36-203ENST00000475375 THAP8Q8NA92 274 aa14.23□□□□□ -0.13
VPS36-203ENST00000475375 BPIFCQ8NFQ6 507 aa14.23□□□□□ -0.13
VPS36-203ENST00000475375 OR4D5Q8NGN0 318 aa14.23□□□□□ -0.13
VPS36-203ENST00000475375 C16orf74Q96GX8 76 aa14.23□□□□□ -0.13
VPS36-203ENST00000475375 NOP10Q9NPE3 64 aaKnown RBP14.23□□□□□ -0.13
VPS36-203ENST00000475375 SLC45A2Q9UMX9 530 aa14.23□□□□□ -0.13
VPS36-203ENST00000475375 TRAV8-2A0A0B4J237 113 aa14.22□□□□□ -0.13
VPS36-203ENST00000475375 RGS5O15539 181 aa14.22□□□□□ -0.13
VPS36-203ENST00000475375 MRPS10P82664 201 aaKnown RBP14.22□□□□□ -0.13
VPS36-203ENST00000475375 TMEM144Q7Z5S9 345 aa14.22□□□□□ -0.13
VPS36-203ENST00000475375 TMEM256Q8N2U0 113 aa14.22□□□□□ -0.13
VPS36-203ENST00000475375 Q9H3A6 140 aa14.22□□□□□ -0.13
VPS36-203ENST00000475375 TRAV26-1A0A087WT03 109 aa14.21□□□□□ -0.13
VPS36-203ENST00000475375 GATA2P23769 480 aaPredicted RBP14.21□□□□□ -0.13
VPS36-203ENST00000475375 OR10J6PQ8NGY7 276 aa14.21□□□□□ -0.13
VPS36-203ENST00000475375 A0A0J9YY99 117 aa14.2□□□□□ -0.14
VPS36-203ENST00000475375 ANXA3P12429 323 aa14.2□□□□□ -0.14
VPS36-203ENST00000475375 BTF3P20290 206 aaKnown RBP14.2□□□□□ -0.14
VPS36-203ENST00000475375 SRPXP78539 464 aa14.2□□□□□ -0.14
VPS36-203ENST00000475375 SMIM4Q8WVI0 70 aa14.2□□□□□ -0.14
VPS36-203ENST00000475375 SCGB3A2Q96PL1 93 aa14.2□□□□□ -0.14
VPS36-203ENST00000475375 M6PRP20645 277 aa14.19□□□□□ -0.14
VPS36-203ENST00000475375 AKR1C1Q04828 323 aa14.19□□□□□ -0.14
VPS36-203ENST00000475375 MIXL1Q9H2W2 232 aa14.19□□□□□ -0.14
VPS36-203ENST00000475375 ZNF586Q9NXT0 402 aa14.19□□□□□ -0.14
VPS36-203ENST00000475375 SCP2D1Q9UJQ7 156 aa14.19□□□□□ -0.14
VPS36-203ENST00000475375 INAFM2P0DMQ5 153 aa14.18□□□□□ -0.14
VPS36-203ENST00000475375 PRB4P10163 310 aaPredicted RBP14.18□□□□□ -0.14
VPS36-203ENST00000475375 ZNF493Q6ZR52 646 aa14.18□□□□□ -0.14
VPS36-203ENST00000475375 OR8A1Q8NGG7 326 aa14.18□□□□□ -0.14
VPS36-203ENST00000475375 LRRC20Q8TCA0 184 aa14.18□□□□□ -0.14
VPS36-203ENST00000475375 RXFP4Q8TDU9 374 aa14.18□□□□□ -0.14
VPS36-203ENST00000475375 NAA50Q9GZZ1 169 aaKnown RBP14.18□□□□□ -0.14
VPS36-203ENST00000475375 A0A1W2PPQ1 181 aa14.17□□□□□ -0.14
VPS36-203ENST00000475375 ADAP1O75689 374 aa14.17□□□□□ -0.14
VPS36-203ENST00000475375 RPP30P78346 268 aaKnown RBP14.17□□□□□ -0.14
VPS36-203ENST00000475375 IL18Q14116 193 aa14.17□□□□□ -0.14
VPS36-203ENST00000475375 TMEM182Q6ZP80 229 aaPredicted RBP14.17□□□□□ -0.14
VPS36-203ENST00000475375 TMEM263Q8WUH6 116 aaKnown RBP14.17□□□□□ -0.14
VPS36-203ENST00000475375 MCUBQ9NWR8 336 aa14.17□□□□□ -0.14
VPS36-203ENST00000475375 ZNF701M0R085 212 aaPredicted RBP14.16□□□□□ -0.14
VPS36-203ENST00000475375 MED6O75586 246 aa14.16□□□□□ -0.14
VPS36-203ENST00000475375 RPL7P18124 248 aaKnown RBP14.16□□□□□ -0.14
VPS36-203ENST00000475375 RAP2BP61225 183 aa14.16□□□□□ -0.14
VPS36-203ENST00000475375 CTF1Q16619 201 aa14.16□□□□□ -0.14
VPS36-203ENST00000475375 ESRGQ1W209 222 aa14.16□□□□□ -0.14
VPS36-203ENST00000475375 RNASE8Q8TDE3 154 aaKnown RBP14.16□□□□□ -0.14
VPS36-203ENST00000475375 ZNF503Q96F45 646 aa14.16□□□□□ -0.14
VPS36-203ENST00000475375 UPK3BQ9BT76 320 aa14.16□□□□□ -0.14
VPS36-203ENST00000475375 PTTG2Q9NZH5 202 aa14.16□□□□□ -0.14
VPS36-203ENST00000475375 H3BRN7 92 aa14.15□□□□□ -0.14
VPS36-203ENST00000475375 CIB3Q96Q77 187 aaPredicted RBP14.15□□□□□ -0.14
VPS36-203ENST00000475375 HIGD1AQ9Y241 93 aa14.15□□□□□ -0.14
VPS36-203ENST00000475375 MRPS16Q9Y3D3 137 aaKnown RBP14.15□□□□□ -0.14
VPS36-203ENST00000475375 PIGBOS1A0A0B4J2F0 54 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 GAGE12BA1L429 117 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 SMCO3A2RU48 225 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 H7BYZ3 331 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 WRBO00258 174 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 CTDSP2O14595 271 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 PITX3O75364 302 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 GAGE7O76087 117 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 GAGE12FP0CL80 117 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 GAGE12GP0CL81 117 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 GAGE12IP0CL82 117 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 CXCL3P19876 107 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 CDKN1BP46527 198 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 PSG3Q16557 428 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 CCDC28AQ8IWP9 274 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 SHANK2-AS3Q9BTD1 123 aa14.14□□□□□ -0.15
VPS36-203ENST00000475375 ANKRD20A5PA0PJZ0 165 aa14.13□□□□□ -0.15
VPS36-203ENST00000475375 PRSS46E5RG02 174 aa14.13□□□□□ -0.15
VPS36-203ENST00000475375 RLN2P04090 185 aa14.13□□□□□ -0.15
VPS36-203ENST00000475375 IL5P05113 134 aa14.13□□□□□ -0.15
VPS36-203ENST00000475375 HOXA5P20719 270 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms