RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 BOLA2-SMG1P6H3BVE0 249 aa8.77□□□□□ -1.01
SKA3-206ENST00000475251 INAFM2P0DMQ5 153 aa8.77□□□□□ -1.01
SKA3-206ENST00000475251 KRTAP10-2P60368 255 aa8.77□□□□□ -1.01
SKA3-206ENST00000475251 RAB11AP62491 216 aa8.77□□□□□ -1.01
SKA3-206ENST00000475251 OR2F1Q13607 317 aa8.77□□□□□ -1.01
SKA3-206ENST00000475251 SMCO1Q147U7 214 aa8.77□□□□□ -1.01
SKA3-206ENST00000475251 FCN2Q15485 313 aa8.77□□□□□ -1.01
SKA3-206ENST00000475251 ZNF493Q6ZR52 646 aa8.77□□□□□ -1.01
SKA3-206ENST00000475251 BAP18Q8IXM2 172 aa8.77□□□□□ -1.01
SKA3-206ENST00000475251 GNPNAT1Q96EK6 184 aaPredicted RBP8.77□□□□□ -1.01
SKA3-206ENST00000475251 SLC25A32Q9H2D1 315 aa8.77□□□□□ -1.01
SKA3-206ENST00000475251 PPP1R14DQ9NXH3 145 aa8.77□□□□□ -1.01
SKA3-206ENST00000475251 EXTL2Q9UBQ6 330 aa8.77□□□□□ -1.01
SKA3-206ENST00000475251 DNAH5Q8TE73 4624 aa8.77□□□□□ -1.01
SKA3-206ENST00000475251 A0A0B4J2A0 478 aa8.76□□□□□ -1.01
SKA3-206ENST00000475251 ZNF98A6NK75 572 aa8.76□□□□□ -1.01
SKA3-206ENST00000475251 PRM2P04554 102 aa8.76□□□□□ -1.01
SKA3-206ENST00000475251 AKR1C4P17516 323 aa8.76□□□□□ -1.01
SKA3-206ENST00000475251 NCS1P62166 190 aa8.76□□□□□ -1.01
SKA3-206ENST00000475251 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.76□□□□□ -1.01
SKA3-206ENST00000475251 TMEM144Q7Z5S9 345 aa8.76□□□□□ -1.01
SKA3-206ENST00000475251 RBKSQ9H477 322 aa8.76□□□□□ -1.01
SKA3-206ENST00000475251 SHPKQ9UHJ6 478 aa8.76□□□□□ -1.01
SKA3-206ENST00000475251 TRAV12-2A0A075B6T6 113 aa8.75□□□□□ -1.01
SKA3-206ENST00000475251 A0A087WXM4 84 aa8.75□□□□□ -1.01
SKA3-206ENST00000475251 EREGO14944 169 aa8.75□□□□□ -1.01
SKA3-206ENST00000475251 ATP6V1G2O95670 118 aa8.75□□□□□ -1.01
SKA3-206ENST00000475251 AZU1P20160 251 aa8.75□□□□□ -1.01
SKA3-206ENST00000475251 M6PRP20645 277 aa8.75□□□□□ -1.01
SKA3-206ENST00000475251 MRPS10P82664 201 aaKnown RBP8.75□□□□□ -1.01
SKA3-206ENST00000475251 OR5I1Q13606 314 aa8.75□□□□□ -1.01
SKA3-206ENST00000475251 ZNF738Q8NE65 137 aa8.75□□□□□ -1.01
SKA3-206ENST00000475251 BPIFCQ8NFQ6 507 aa8.75□□□□□ -1.01
SKA3-206ENST00000475251 RXFP4Q8TDU9 374 aa8.75□□□□□ -1.01
SKA3-206ENST00000475251 TMEM263Q8WUH6 116 aaKnown RBP8.75□□□□□ -1.01
SKA3-206ENST00000475251 PRRT1Q99946 306 aa8.75□□□□□ -1.01
SKA3-206ENST00000475251 TMEM147Q9BVK8 224 aa8.75□□□□□ -1.01
SKA3-206ENST00000475251 KRTAP1-5Q9BYS1 174 aa8.75□□□□□ -1.01
SKA3-206ENST00000475251 GPR132Q9UNW8 380 aa8.75□□□□□ -1.01
SKA3-206ENST00000475251 TRAV26-1A0A087WT03 109 aa8.74□□□□□ -1.01
SKA3-206ENST00000475251 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
SKA3-206ENST00000475251 H3BNG1 76 aa8.74□□□□□ -1.01
SKA3-206ENST00000475251 ANXA3P12429 323 aa8.74□□□□□ -1.01
SKA3-206ENST00000475251 HTN1P15515 57 aa8.74□□□□□ -1.01
SKA3-206ENST00000475251 VBP1P61758 197 aa8.74□□□□□ -1.01
SKA3-206ENST00000475251 RHOBP62745 196 aa8.74□□□□□ -1.01
SKA3-206ENST00000475251 RPP30P78346 268 aaKnown RBP8.74□□□□□ -1.01
SKA3-206ENST00000475251 SRPXP78539 464 aa8.74□□□□□ -1.01
SKA3-206ENST00000475251 CDPF1Q6NVV7 123 aa8.74□□□□□ -1.01
SKA3-206ENST00000475251 THAP8Q8NA92 274 aa8.74□□□□□ -1.01
SKA3-206ENST00000475251 OR1S1Q8NH92 325 aa8.74□□□□□ -1.01
SKA3-206ENST00000475251 FRZBQ92765 325 aa8.74□□□□□ -1.01
SKA3-206ENST00000475251 SCGB3A2Q96PL1 93 aa8.74□□□□□ -1.01
SKA3-206ENST00000475251 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
SKA3-206ENST00000475251 SLC25A39Q9BZJ4 359 aaPredicted RBP8.74□□□□□ -1.01
SKA3-206ENST00000475251 MRPS16Q9Y3D3 137 aaKnown RBP8.74□□□□□ -1.01
SKA3-206ENST00000475251 AKAIN1P0CW23 69 aa8.73□□□□□ -1.01
SKA3-206ENST00000475251 ORM2P19652 201 aa8.73□□□□□ -1.01
SKA3-206ENST00000475251 HIST1H1AQ02539 215 aaPredicted RBP8.73□□□□□ -1.01
SKA3-206ENST00000475251 FGL1Q08830 312 aa8.73□□□□□ -1.01
SKA3-206ENST00000475251 FAAP20Q6NZ36 180 aa8.73□□□□□ -1.01
SKA3-206ENST00000475251 LYPD1Q8N2G4 141 aa8.73□□□□□ -1.01
SKA3-206ENST00000475251 C20orf144Q9BQM9 153 aa8.73□□□□□ -1.01
SKA3-206ENST00000475251 FUNDC2Q9BWH2 189 aa8.73□□□□□ -1.01
SKA3-206ENST00000475251 NOP10Q9NPE3 64 aaKnown RBP8.73□□□□□ -1.01
SKA3-206ENST00000475251 PAIP2BQ9ULR5 123 aaKnown RBP8.73□□□□□ -1.01
SKA3-206ENST00000475251 IGKV1OR2-108A0A075B7D4 117 aa8.72□□□□□ -1.01
SKA3-206ENST00000475251 TRAV8-2A0A0B4J237 113 aa8.72□□□□□ -1.01
SKA3-206ENST00000475251 H7BYZ3 331 aa8.72□□□□□ -1.01
SKA3-206ENST00000475251 MED6O75586 246 aa8.72□□□□□ -1.01
SKA3-206ENST00000475251 RPL7P18124 248 aaKnown RBP8.72□□□□□ -1.01
SKA3-206ENST00000475251 CDKN1BP46527 198 aa8.72□□□□□ -1.01
SKA3-206ENST00000475251 DLK1P80370 383 aa8.72□□□□□ -1.01
SKA3-206ENST00000475251 LYZL2Q7Z4W2 148 aa8.72□□□□□ -1.01
SKA3-206ENST00000475251 S100A7AQ86SG5 101 aa8.72□□□□□ -1.01
SKA3-206ENST00000475251 CCDC28AQ8IWP9 274 aa8.72□□□□□ -1.01
SKA3-206ENST00000475251 RNF182Q8N6D2 247 aa8.72□□□□□ -1.01
SKA3-206ENST00000475251 OR8A1Q8NGG7 326 aa8.72□□□□□ -1.01
SKA3-206ENST00000475251 RNASE8Q8TDE3 154 aaKnown RBP8.72□□□□□ -1.01
SKA3-206ENST00000475251 UHRF2Q96PU4 802 aa8.72□□□□□ -1.01
SKA3-206ENST00000475251 CIB3Q96Q77 187 aaPredicted RBP8.72□□□□□ -1.01
SKA3-206ENST00000475251 ZNF586Q9NXT0 402 aa8.72□□□□□ -1.01
SKA3-206ENST00000475251 DUXBA0A1W2PPF3 345 aa8.71□□□□□ -1.02
SKA3-206ENST00000475251 ZNF701M0R085 212 aaPredicted RBP8.71□□□□□ -1.02
SKA3-206ENST00000475251 RLN2P04090 185 aa8.71□□□□□ -1.02
SKA3-206ENST00000475251 ERVFC1-1P60608 527 aa8.71□□□□□ -1.02
SKA3-206ENST00000475251 RAP2BP61225 183 aa8.71□□□□□ -1.02
SKA3-206ENST00000475251 ESRGQ1W209 222 aa8.71□□□□□ -1.02
SKA3-206ENST00000475251 Q5VSD8 79 aa8.71□□□□□ -1.02
SKA3-206ENST00000475251 IGFL4Q6B9Z1 124 aa8.71□□□□□ -1.02
SKA3-206ENST00000475251 C17orf77Q96MU5 243 aa8.71□□□□□ -1.02
SKA3-206ENST00000475251 SCP2D1Q9UJQ7 156 aa8.71□□□□□ -1.02
SKA3-206ENST00000475251 RNF24Q9Y225 148 aa8.71□□□□□ -1.02
SKA3-206ENST00000475251 DMBT1Q9UGM3 2413 aaPredicted RBP8.71□□□□□ -1.02
SKA3-206ENST00000475251 A0A0J9YY99 117 aa8.7□□□□□ -1.02
SKA3-206ENST00000475251 SNURFLB1AK76 121 aa8.7□□□□□ -1.02
SKA3-206ENST00000475251 LINC00315P59091 139 aa8.7□□□□□ -1.02
SKA3-206ENST00000475251 AKR1C1Q04828 323 aa8.7□□□□□ -1.02
SKA3-206ENST00000475251 CLVS1Q8IUQ0 354 aaPredicted RBP8.7□□□□□ -1.02
SKA3-206ENST00000475251 LINC00612Q8N6U2 182 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms