RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 IGKV3-7A0A075B6H7 116 aa12.53□□□□□ -0.4
SCAF11-206ENST00000474828 A0A087X0K7 114 aa12.53□□□□□ -0.4
SCAF11-206ENST00000474828 MEOX2P50222 304 aa12.53□□□□□ -0.4
SCAF11-206ENST00000474828 B2MP61769 119 aa12.53□□□□□ -0.4
SCAF11-206ENST00000474828 RPL11P62913 178 aaKnown RBP12.53□□□□□ -0.4
SCAF11-206ENST00000474828 HAGHQ16775 308 aa12.53□□□□□ -0.4
SCAF11-206ENST00000474828 OR1L4Q8NGR5 311 aa12.53□□□□□ -0.4
SCAF11-206ENST00000474828 GATAD1Q8WUU5 269 aa12.53□□□□□ -0.4
SCAF11-206ENST00000474828 UHRF2Q96PU4 802 aa12.53□□□□□ -0.4
SCAF11-206ENST00000474828 PFDN5Q99471 154 aa12.53□□□□□ -0.4
SCAF11-206ENST00000474828 TUBA4BQ9H853 241 aa12.53□□□□□ -0.4
SCAF11-206ENST00000474828 DOK5Q9P104 306 aa12.53□□□□□ -0.4
SCAF11-206ENST00000474828 OR5G3P0C626 314 aa12.52□□□□□ -0.41
SCAF11-206ENST00000474828 RPL7P18124 248 aaKnown RBP12.52□□□□□ -0.41
SCAF11-206ENST00000474828 GALR1P47211 349 aa12.52□□□□□ -0.41
SCAF11-206ENST00000474828 TFPI2P48307 235 aa12.52□□□□□ -0.41
SCAF11-206ENST00000474828 LINC00305Q7Z4B0 112 aa12.52□□□□□ -0.41
SCAF11-206ENST00000474828 PPP1R14BQ96C90 147 aa12.52□□□□□ -0.41
SCAF11-206ENST00000474828 KCNIP2Q9NS61 270 aa12.52□□□□□ -0.41
SCAF11-206ENST00000474828 UBQLN2Q9UHD9 624 aa12.52□□□□□ -0.41
SCAF11-206ENST00000474828 ISLRO14498 428 aa12.51□□□□□ -0.41
SCAF11-206ENST00000474828 COX7A2P2O60397 106 aa12.51□□□□□ -0.41
SCAF11-206ENST00000474828 PSMB3P49720 205 aa12.51□□□□□ -0.41
SCAF11-206ENST00000474828 MORN5Q5VZ52 161 aa12.51□□□□□ -0.41
SCAF11-206ENST00000474828 C10orf113Q5VZT2 155 aa12.51□□□□□ -0.41
SCAF11-206ENST00000474828 LEMD1Q68G75 181 aa12.51□□□□□ -0.41
SCAF11-206ENST00000474828 WFDC3Q8IUB2 231 aa12.51□□□□□ -0.41
SCAF11-206ENST00000474828 LOC102724200A0A096LPH7 203 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-206ENST00000474828 KIR2DL5BA0A0G2JN68 375 aa12.5□□□□□ -0.41
SCAF11-206ENST00000474828 KIR2DL5BA0A0G2JPC4 375 aa12.5□□□□□ -0.41
SCAF11-206ENST00000474828 DEFB131AP59861 70 aa12.5□□□□□ -0.41
SCAF11-206ENST00000474828 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.5□□□□□ -0.41
SCAF11-206ENST00000474828 APRG1Q8IVJ8 170 aa12.5□□□□□ -0.41
SCAF11-206ENST00000474828 KIR2DL5AQ8N109 375 aa12.5□□□□□ -0.41
SCAF11-206ENST00000474828 KIR2DL5BQ8NHK3 375 aa12.5□□□□□ -0.41
SCAF11-206ENST00000474828 SLC25A22Q9H936 323 aa12.5□□□□□ -0.41
SCAF11-206ENST00000474828 TIMM9Q9Y5J7 89 aa12.5□□□□□ -0.41
SCAF11-206ENST00000474828 HMSDA8MTL9 139 aa12.49□□□□□ -0.41
SCAF11-206ENST00000474828 C17orf112F2Z3M2 114 aa12.49□□□□□ -0.41
SCAF11-206ENST00000474828 IFNA5P01569 189 aa12.49□□□□□ -0.41
SCAF11-206ENST00000474828 SNRPD3P62318 126 aaKnown RBP12.49□□□□□ -0.41
SCAF11-206ENST00000474828 ZNF266Q14584 549 aa12.49□□□□□ -0.41
SCAF11-206ENST00000474828 ZNF124Q15973 351 aa12.49□□□□□ -0.41
SCAF11-206ENST00000474828 INO80EQ8NBZ0 244 aaPredicted RBP12.49□□□□□ -0.41
SCAF11-206ENST00000474828 RSG1Q9BU20 258 aa12.49□□□□□ -0.41
SCAF11-206ENST00000474828 SMIM3Q9BZL3 60 aa12.49□□□□□ -0.41
SCAF11-206ENST00000474828 NBEAL2Q6ZNJ1 2754 aa12.48□□□□□ -0.41
SCAF11-206ENST00000474828 TENM3Q9P273 2699 aa12.48□□□□□ -0.41
SCAF11-206ENST00000474828 ZNF688P0C7X2 276 aa12.48□□□□□ -0.41
SCAF11-206ENST00000474828 IGLC2P0DOY2 106 aa12.48□□□□□ -0.41
SCAF11-206ENST00000474828 CXCL2P19875 107 aa12.48□□□□□ -0.41
SCAF11-206ENST00000474828 BPIFA4PQ86YQ2 179 aa12.48□□□□□ -0.41
SCAF11-206ENST00000474828 ZNF709Q8N972 641 aa12.48□□□□□ -0.41
SCAF11-206ENST00000474828 ST6GAL2Q96JF0 529 aa12.48□□□□□ -0.41
SCAF11-206ENST00000474828 CLUHP3Q96NS8 147 aa12.48□□□□□ -0.41
SCAF11-206ENST00000474828 TMEM14CQ9P0S9 112 aa12.48□□□□□ -0.41
SCAF11-206ENST00000474828 STAB2Q8WWQ8 2551 aa12.47□□□□□ -0.41
SCAF11-206ENST00000474828 FXYD6-FXYD2A0A087WZ82 144 aa12.47□□□□□ -0.41
SCAF11-206ENST00000474828 TRAV8-2A0A0B4J237 113 aa12.47□□□□□ -0.41
SCAF11-206ENST00000474828 UBE2CO00762 179 aa12.47□□□□□ -0.41
SCAF11-206ENST00000474828 ID1P41134 155 aa12.47□□□□□ -0.41
SCAF11-206ENST00000474828 ZNF345Q14585 488 aa12.47□□□□□ -0.41
SCAF11-206ENST00000474828 GCSAMLQ5JQS6 135 aa12.47□□□□□ -0.41
SCAF11-206ENST00000474828 TRPT1Q86TN4 253 aaKnown RBP12.47□□□□□ -0.41
SCAF11-206ENST00000474828 OR11H4Q8NGC9 324 aa12.47□□□□□ -0.41
SCAF11-206ENST00000474828 OR2G3Q8NGZ4 309 aa12.47□□□□□ -0.41
SCAF11-206ENST00000474828 SCGB1C1Q8TD33 95 aa12.47□□□□□ -0.41
SCAF11-206ENST00000474828 FAM167A-AS1Q96KT0 104 aa12.47□□□□□ -0.41
SCAF11-206ENST00000474828 ASCL2Q99929 193 aa12.47□□□□□ -0.41
SCAF11-206ENST00000474828 HRH4Q9H3N8 390 aa12.47□□□□□ -0.41
SCAF11-206ENST00000474828 TCTE3Q8IZS6 198 aa12.46□□□□□ -0.41
SCAF11-206ENST00000474828 SAT2Q96F10 170 aaPredicted RBP12.46□□□□□ -0.41
SCAF11-206ENST00000474828 PSMG3Q9BT73 122 aaPredicted RBP12.46□□□□□ -0.41
SCAF11-206ENST00000474828 MRPL32Q9BYC8 188 aaKnown RBP12.46□□□□□ -0.41
SCAF11-206ENST00000474828 A8MTW9 85 aa12.45□□□□□ -0.42
SCAF11-206ENST00000474828 TAAR5O14804 337 aa12.45□□□□□ -0.42
SCAF11-206ENST00000474828 ZNF253O75346 499 aa12.45□□□□□ -0.42
SCAF11-206ENST00000474828 APOC4P55056 127 aa12.45□□□□□ -0.42
SCAF11-206ENST00000474828 GUK1Q16774 197 aa12.45□□□□□ -0.42
SCAF11-206ENST00000474828 PSMG4Q5JS54 123 aa12.45□□□□□ -0.42
SCAF11-206ENST00000474828 SPATA31B1PQ5VZV4 182 aa12.45□□□□□ -0.42
SCAF11-206ENST00000474828 Q6ZWC4 215 aa12.45□□□□□ -0.42
SCAF11-206ENST00000474828 SPATA25Q9BR10 227 aa12.45□□□□□ -0.42
SCAF11-206ENST00000474828 TP53TG1Q9Y2A0 90 aa12.45□□□□□ -0.42
SCAF11-206ENST00000474828 TRAV5A0A0B4J249 113 aa12.44□□□□□ -0.42
SCAF11-206ENST00000474828 H3BQ15 152 aa12.44□□□□□ -0.42
SCAF11-206ENST00000474828 SMLR1H3BR10 107 aa12.44□□□□□ -0.42
SCAF11-206ENST00000474828 HLA-DRB4P13762 266 aa12.44□□□□□ -0.42
SCAF11-206ENST00000474828 ATF4P18848 351 aaPredicted RBP12.44□□□□□ -0.42
SCAF11-206ENST00000474828 FAM78BQ5VT40 261 aa12.44□□□□□ -0.42
SCAF11-206ENST00000474828 LCN15Q6UWW0 184 aa12.44□□□□□ -0.42
SCAF11-206ENST00000474828 FOXI2Q6ZQN5 318 aa12.44□□□□□ -0.42
SCAF11-206ENST00000474828 KCNRGQ8N5I3 272 aa12.44□□□□□ -0.42
SCAF11-206ENST00000474828 C20orf173Q96LM9 149 aa12.44□□□□□ -0.42
SCAF11-206ENST00000474828 SAV1Q9H4B6 383 aaPredicted RBP12.44□□□□□ -0.42
SCAF11-206ENST00000474828 ZNF331Q9NQX6 463 aaPredicted RBP12.44□□□□□ -0.42
SCAF11-206ENST00000474828 CYTL1Q9NRR1 136 aa12.44□□□□□ -0.42
SCAF11-206ENST00000474828 FUT9Q9Y231 359 aa12.44□□□□□ -0.42
SCAF11-206ENST00000474828 HLA-DRB4X5D2U9 266 aa12.44□□□□□ -0.42
SCAF11-206ENST00000474828 H3BMM0 161 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms