RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 DYNLRB2Q8TF09 96 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 RAX2Q96IS3 184 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 SHANK2-AS3Q9BTD1 123 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 MCRIP2Q9BUT9 160 aaKnown RBP7.94□□□□□ -1.14
COL12A1-206ENST00000474564 ZFAND3Q9H8U3 227 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 TMEM167BQ9NRX6 74 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 AKAP9Q99996 3911 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 IGHV3OR16-8A0A075B7F1 116 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 IGHV7-4-1A0A0J9YVY3 117 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 ZNF98A6NK75 572 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 A8MWP6 167 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 ZNF207O43670 478 aaKnown RBP7.93□□□□□ -1.14
COL12A1-206ENST00000474564 SFTA3P0C7M3 94 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 BCL2P10415 239 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 SLURP1P55000 103 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 UBE2G2P60604 165 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 USF2Q15853 346 aaPredicted RBP7.93□□□□□ -1.14
COL12A1-206ENST00000474564 SAMD13Q5VXD3 122 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 CST9LP1Q5W188 147 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 C18orf65Q6ZTR6 163 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 MIR17HGQ75NE6 70 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 SSX7Q7RTT5 188 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 LYPD6BQ8NI32 183 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 TMEM37Q8WXS4 190 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 UHRF2Q96PU4 802 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 PAXXQ9BUH6 204 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 OR51M1Q9H341 326 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 SEPSECSQ9HD40 501 aaKnown RBP7.93□□□□□ -1.14
COL12A1-206ENST00000474564 SMPXQ9UHP9 88 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 VAX2Q9UIW0 290 aa7.93□□□□□ -1.14
COL12A1-206ENST00000474564 CELSR1Q9NYQ6 3014 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 LOC102723971A0A1B0GUV8 181 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 H3BRN7 92 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 APOC3P02656 99 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 STAG3L2P0CL84 134 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 STAG3L3P0CL85 134 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 CBLN1P23435 193 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 GCHFRP30047 84 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 UBE2L3P68036 154 aaKnown RBP7.92□□□□□ -1.14
COL12A1-206ENST00000474564 FHL3Q13643 280 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 TM4SF20Q53R12 229 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 ZNF506Q5JVG8 444 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 SPATA31B1PQ5VZV4 182 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 UNQ9165/PRO28630Q6UXU0 137 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 PATE2Q6UY27 113 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 RBPMS2Q6ZRY4 209 aaKnown RBP7.92□□□□□ -1.14
COL12A1-206ENST00000474564 DLX4Q92988 240 aaPredicted RBP7.92□□□□□ -1.14
COL12A1-206ENST00000474564 DUX3Q96PT4 197 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 RHPN1-AS1Q9BWJ2 59 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 GPR61Q9BZJ8 451 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 SMDT1Q9H4I9 107 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 MTORP42345 2549 aa7.92□□□□□ -1.14
COL12A1-206ENST00000474564 TMEM218A2RU14 115 aa7.91□□□□□ -1.14
COL12A1-206ENST00000474564 BUB3O43684 328 aa7.91□□□□□ -1.14
COL12A1-206ENST00000474564 PAGE4O60829 102 aa7.91□□□□□ -1.14
COL12A1-206ENST00000474564 HIST1H1EP10412 219 aaKnown RBP7.91□□□□□ -1.14
COL12A1-206ENST00000474564 FOLR2P14207 255 aa7.91□□□□□ -1.14
COL12A1-206ENST00000474564 CD33P20138 364 aa7.91□□□□□ -1.14
COL12A1-206ENST00000474564 KRTAP10-3P60369 221 aa7.91□□□□□ -1.14
COL12A1-206ENST00000474564 CCL20P78556 96 aa7.91□□□□□ -1.14
COL12A1-206ENST00000474564 LINC00052Q96N35 136 aa7.91□□□□□ -1.14
COL12A1-206ENST00000474564 RARRES2Q99969 163 aa7.91□□□□□ -1.14
COL12A1-206ENST00000474564 SCRT1Q9BWW7 348 aa7.91□□□□□ -1.14
COL12A1-206ENST00000474564 NKX6-2Q9C056 277 aaPredicted RBP7.91□□□□□ -1.14
COL12A1-206ENST00000474564 SLC35B3Q9H1N7 401 aa7.91□□□□□ -1.14
COL12A1-206ENST00000474564 TMPRSS5Q9H3S3 457 aa7.91□□□□□ -1.14
COL12A1-206ENST00000474564 TMEM14CQ9P0S9 112 aa7.91□□□□□ -1.14
COL12A1-206ENST00000474564 NSD1Q96L73 2696 aaPredicted RBP7.9□□□□□ -1.14
COL12A1-206ENST00000474564 ZNF469Q96JG9 3925 aaPredicted RBP7.9□□□□□ -1.14
COL12A1-206ENST00000474564 C2orf70A6NJV1 201 aa7.9□□□□□ -1.14
COL12A1-206ENST00000474564 C11orf94C9JXX5 98 aa7.9□□□□□ -1.14
COL12A1-206ENST00000474564 DNASE2O00115 360 aaPredicted RBP7.9□□□□□ -1.14
COL12A1-206ENST00000474564 OR10J4P0C629 311 aa7.9□□□□□ -1.14
COL12A1-206ENST00000474564 NBEAP1P0C6P0 100 aa7.9□□□□□ -1.14
COL12A1-206ENST00000474564 ID1P41134 155 aa7.9□□□□□ -1.14
COL12A1-206ENST00000474564 INSL3P51460 131 aa7.9□□□□□ -1.14
COL12A1-206ENST00000474564 SRSF3P84103 164 aaKnown RBP7.9□□□□□ -1.14
COL12A1-206ENST00000474564 PSG9Q00887 426 aa7.9□□□□□ -1.14
COL12A1-206ENST00000474564 MEF2BQ02080 365 aaPredicted RBP7.9□□□□□ -1.14
COL12A1-206ENST00000474564 ICAM4Q14773 271 aa7.9□□□□□ -1.14
COL12A1-206ENST00000474564 SOHLH1Q5JUK2 328 aa7.9□□□□□ -1.14
COL12A1-206ENST00000474564 C16orf54Q6UWD8 224 aa7.9□□□□□ -1.14
COL12A1-206ENST00000474564 SIGLEC15Q6ZMC9 328 aa7.9□□□□□ -1.14
COL12A1-206ENST00000474564 CCDC28AQ8IWP9 274 aa7.9□□□□□ -1.14
COL12A1-206ENST00000474564 AAMDCQ9H7C9 122 aa7.9□□□□□ -1.14
COL12A1-206ENST00000474564 CLEC5AQ9NY25 188 aa7.9□□□□□ -1.14
COL12A1-206ENST00000474564 ZMAT5Q9UDW3 170 aaKnown RBP7.9□□□□□ -1.14
COL12A1-206ENST00000474564 MXRA5Q9NR99 2828 aa7.9□□□□□ -1.15
COL12A1-206ENST00000474564 IGHV3-49A0A0A0MS15 119 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 TRAV5A0A0B4J249 113 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 TRAV25A0A0B4J276 109 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 IGHV3-66A0A0C4DH42 116 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 ADARB2-AS1A8MUL3 147 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 F6UZH7 168 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 M0R036 132 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 CHEK1O14757 476 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 SAP30O75446 220 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 SNAPINO95295 136 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 ZNF674Q2M3X9 581 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 C9orf66Q5T8R8 295 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms