RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 S100A5P33763 92 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 BMI1P35226 326 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 OR2F1Q13607 317 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 TMEM128Q5BJH2 165 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 C16orf54Q6UWD8 224 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 TRPT1Q86TN4 253 aaKnown RBP5.03□□□□□ -1.6
VPS50-211ENST00000474412 KIR2DL5AQ8N109 375 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 CENPSQ8N2Z9 138 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 OR51G1Q8NGK1 321 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 KIR2DL5BQ8NHK3 375 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 RNASEH2CQ8TDP1 164 aaKnown RBP5.03□□□□□ -1.6
VPS50-211ENST00000474412 RNF125Q96EQ8 232 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 CLEC5AQ9NY25 188 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 FAM90A26D6RGX4 464 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 WRBO00258 174 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 PRB4P10163 310 aaPredicted RBP5.02□□□□□ -1.61
VPS50-211ENST00000474412 SLC25A4P12235 298 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 ANXA3P12429 323 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 ANXA7P20073 488 aaKnown RBP5.02□□□□□ -1.61
VPS50-211ENST00000474412 FAUP35544 74 aaKnown RBP5.02□□□□□ -1.61
VPS50-211ENST00000474412 YPEL3P61236 119 aaPredicted RBP5.02□□□□□ -1.61
VPS50-211ENST00000474412 LYZP61626 148 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 DHRS2Q13268 280 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 GAMTQ14353 236 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 PSMG4Q5JS54 123 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 GDF5OSQ5U4N7 250 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 GGNBP1Q5YKI7 109 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 TMEM182Q6ZP80 229 aaPredicted RBP5.02□□□□□ -1.61
VPS50-211ENST00000474412 LRTM2Q8N967 370 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 Q8NAQ8 132 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 OR11H2Q8NH07 326 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 PBDC1Q9BVG4 233 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 CSTL1Q9H114 145 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 PAIP2BQ9ULR5 123 aaKnown RBP5.02□□□□□ -1.61
VPS50-211ENST00000474412 KCNIP3Q9Y2W7 256 aa5.02□□□□□ -1.61
VPS50-211ENST00000474412 TRAV30A0A087WSZ9 112 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 TRAV2A0A0B4J234 112 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 DUXBA0A1W2PPF3 345 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 C9orf170A2RU37 121 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 ZFP92A6NM28 416 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 UBE2CO00762 179 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 CCSO14618 274 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 NDUFB6O95139 128 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 IFNA4P05014 189 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 IL7P13232 177 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 GATA2P23769 480 aaPredicted RBP5.01□□□□□ -1.61
VPS50-211ENST00000474412 AP3S2P59780 193 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 POLR2GP62487 172 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS50-211ENST00000474412 SRPXP78539 464 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 ACTL10Q5JWF8 245 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 SPANXN2Q5MJ10 180 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 TRIQKQ629K1 86 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 SIGLEC15Q6ZMC9 328 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 ACOT7LQ6ZUV0 252 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 Q8WTZ3 238 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 GRAMD2BQ96HH9 432 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 SLC35E1Q96K37 410 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 C17orf77Q96MU5 243 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 SCGB3A2Q96PL1 93 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 RARRES2Q99969 163 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 SCRT1Q9BWW7 348 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 TMEM231Q9H6L2 316 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 FBXL17Q9UF56 701 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 CELA1Q9UNI1 258 aa5.01□□□□□ -1.61
VPS50-211ENST00000474412 A0A1W2PS18 150 aa5□□□□□ -1.61
VPS50-211ENST00000474412 NUPR2A6NF83 97 aa5□□□□□ -1.61
VPS50-211ENST00000474412 HELTA6NFD8 242 aa5□□□□□ -1.61
VPS50-211ENST00000474412 PMS2P5A8MQ11 134 aa5□□□□□ -1.61
VPS50-211ENST00000474412 F6UB75 175 aa5□□□□□ -1.61
VPS50-211ENST00000474412 ZNF701M0R085 212 aaPredicted RBP5□□□□□ -1.61
VPS50-211ENST00000474412 SOCS3O14543 225 aa5□□□□□ -1.61
VPS50-211ENST00000474412 SYNGR2O43760 224 aa5□□□□□ -1.61
VPS50-211ENST00000474412 SSSCA1O60232 199 aa5□□□□□ -1.61
VPS50-211ENST00000474412 DEDDO75618 318 aa5□□□□□ -1.61
VPS50-211ENST00000474412 RBMY1A1P0DJD3 496 aaKnown RBP5□□□□□ -1.61
VPS50-211ENST00000474412 RBMY1CP0DJD4 496 aa5□□□□□ -1.61
VPS50-211ENST00000474412 RD3LP0DJH9 198 aa5□□□□□ -1.61
VPS50-211ENST00000474412 EIF2B2P49770 351 aaKnown RBP5□□□□□ -1.61
VPS50-211ENST00000474412 FXYD7P58549 80 aa5□□□□□ -1.61
VPS50-211ENST00000474412 PAFAH1B2P68402 229 aa5□□□□□ -1.61
VPS50-211ENST00000474412 RBMY1FQ15415 496 aaKnown RBP5□□□□□ -1.61
VPS50-211ENST00000474412 SPANXN5Q5MJ07 72 aa5□□□□□ -1.61
VPS50-211ENST00000474412 PAPPA-AS1Q5QFB9 102 aa5□□□□□ -1.61
VPS50-211ENST00000474412 ETFRF1Q6IPR1 90 aa5□□□□□ -1.61
VPS50-211ENST00000474412 ZNF767PQ75MW2 155 aa5□□□□□ -1.61
VPS50-211ENST00000474412 NOXA1Q86UR1 476 aa5□□□□□ -1.61
VPS50-211ENST00000474412 STHQ8IWL8 128 aa5□□□□□ -1.61
VPS50-211ENST00000474412 THAP8Q8NA92 274 aa5□□□□□ -1.61
VPS50-211ENST00000474412 CSNK1G2-AS1Q8NCQ2 148 aa5□□□□□ -1.61
VPS50-211ENST00000474412 OR4D5Q8NGN0 318 aa5□□□□□ -1.61
VPS50-211ENST00000474412 PHLDA1Q8WV24 401 aaPredicted RBP5□□□□□ -1.61
VPS50-211ENST00000474412 SLC25A21Q9BQT8 299 aaPredicted RBP5□□□□□ -1.61
VPS50-211ENST00000474412 C11orf68Q9H3H3 251 aaKnown RBP5□□□□□ -1.61
VPS50-211ENST00000474412 NRN1Q9NPD7 142 aa5□□□□□ -1.61
VPS50-211ENST00000474412 DOK5Q9P104 306 aa5□□□□□ -1.61
VPS50-211ENST00000474412 RCL1Q9Y2P8 373 aaKnown RBP5□□□□□ -1.61
VPS50-211ENST00000474412 U3KQ87 197 aa5□□□□□ -1.61
VPS50-211ENST00000474412 KMT2AQ03164 3969 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 A0A087WYN8 130 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 GAGE10A6NGK3 116 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms