RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 COX7A2P2O60397 106 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 PTTG1O95997 202 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 RPL7P18124 248 aaKnown RBP10.44□□□□□ -0.74
VAMP4-203ENST00000474047 Q6ZRG5 221 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 UHRF2Q96PU4 802 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 MGST2Q99735 147 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 ARV1Q9H2C2 271 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 PET100P0DJ07 73 aa10.43□□□□□ -0.74
VAMP4-203ENST00000474047 TMEM41BQ5BJD5 291 aa10.43□□□□□ -0.74
VAMP4-203ENST00000474047 OR11H2Q8NH07 326 aa10.43□□□□□ -0.74
VAMP4-203ENST00000474047 LRRC20Q8TCA0 184 aa10.43□□□□□ -0.74
VAMP4-203ENST00000474047 AGRNO00468 2067 aa10.43□□□□□ -0.74
VAMP4-203ENST00000474047 A0A0J9YWU9 116 aa10.42□□□□□ -0.74
VAMP4-203ENST00000474047 H2BFSP57053 126 aa10.42□□□□□ -0.74
VAMP4-203ENST00000474047 EBLN2Q6P2I7 272 aa10.42□□□□□ -0.74
VAMP4-203ENST00000474047 PPP1R1CQ8WVI7 109 aa10.42□□□□□ -0.74
VAMP4-203ENST00000474047 RPRMQ9NS64 109 aa10.42□□□□□ -0.74
VAMP4-203ENST00000474047 OR5AC2Q9NZP5 309 aa10.42□□□□□ -0.74
VAMP4-203ENST00000474047 WDR83OSQ9Y284 106 aa10.42□□□□□ -0.74
VAMP4-203ENST00000474047 ELOA3CA0A087WX78 387 aaPredicted RBP10.41□□□□□ -0.74
VAMP4-203ENST00000474047 IGKV3-20P01619 116 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 FGF7P21781 194 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 NHLH2Q02577 135 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 C10orf113Q5VZT2 155 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 LINC00305Q7Z4B0 112 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 ALG5Q9Y673 324 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 H3BMM0 161 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 SOCS3O14543 225 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 EWSR1Q01844 656 aaKnown RBP eCLIP10.41□□□□□ -0.74
VAMP4-203ENST00000474047 VWC2Q2TAL6 325 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 MIC13Q5XKP0 118 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 PATE2Q6UY27 113 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 FOXI2Q6ZQN5 318 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 OR4B1Q8NGF8 309 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 OR5C1Q8NGR4 320 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 C1QTNF4Q9BXJ3 329 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 DNAJC4Q9NNZ3 241 aa10.41□□□□□ -0.74
VAMP4-203ENST00000474047 HUWE1Q7Z6Z7 4374 aaKnown RBP10.4□□□□□ -0.74
VAMP4-203ENST00000474047 HLA-DRB4P13762 266 aa10.4□□□□□ -0.74
VAMP4-203ENST00000474047 SPATA31B1PQ5VZV4 182 aa10.4□□□□□ -0.74
VAMP4-203ENST00000474047 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.4□□□□□ -0.74
VAMP4-203ENST00000474047 OR1L4Q8NGR5 311 aa10.4□□□□□ -0.74
VAMP4-203ENST00000474047 PFDN5Q99471 154 aa10.4□□□□□ -0.74
VAMP4-203ENST00000474047 SAV1Q9H4B6 383 aaPredicted RBP10.4□□□□□ -0.74
VAMP4-203ENST00000474047 HLA-DRB4X5D2U9 266 aa10.4□□□□□ -0.74
VAMP4-203ENST00000474047 MPDU1O75352 247 aa10.39□□□□□ -0.75
VAMP4-203ENST00000474047 MPC2O95563 127 aa10.39□□□□□ -0.75
VAMP4-203ENST00000474047 DEFB1P60022 68 aa10.39□□□□□ -0.75
VAMP4-203ENST00000474047 CLINT1Q14677 625 aa10.39□□□□□ -0.75
VAMP4-203ENST00000474047 BPIFA4PQ86YQ2 179 aa10.39□□□□□ -0.75
VAMP4-203ENST00000474047 ZNF709Q8N972 641 aa10.39□□□□□ -0.75
VAMP4-203ENST00000474047 MED28Q9H204 178 aa10.39□□□□□ -0.75
VAMP4-203ENST00000474047 SLC39A9Q9NUM3 307 aa10.39□□□□□ -0.75
VAMP4-203ENST00000474047 CLEC5AQ9NY25 188 aa10.39□□□□□ -0.75
VAMP4-203ENST00000474047 CXorf65A6NEN9 183 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 H0YIZ8 118 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 C4BPBP20851 252 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 RPL29P47914 159 aaKnown RBP10.38□□□□□ -0.75
VAMP4-203ENST00000474047 B2MP61769 119 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 IGFL4Q6B9Z1 124 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 THAP6Q8TBB0 222 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 XCL2Q9UBD3 114 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 PRR20EP86478 221 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 PRR20CP86479 221 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 PRR20DP86480 221 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 PRR20BP86481 221 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 PRR20AP86496 221 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 OPCMLQ14982 345 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 GDF5OSQ5U4N7 250 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 ZNF738Q8NE65 137 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 TMEM37Q8WXS4 190 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 C20orf173Q96LM9 149 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 PXMP4Q9Y6I8 212 aa10.38□□□□□ -0.75
VAMP4-203ENST00000474047 F6UB75 175 aa10.37□□□□□ -0.75
VAMP4-203ENST00000474047 GIG44P09565 113 aaPredicted RBP10.37□□□□□ -0.75
VAMP4-203ENST00000474047 FXYD7P58549 80 aa10.37□□□□□ -0.75
VAMP4-203ENST00000474047 PMS2P11Q13670 270 aa10.37□□□□□ -0.75
VAMP4-203ENST00000474047 FAM78BQ5VT40 261 aa10.37□□□□□ -0.75
VAMP4-203ENST00000474047 RNF182Q8N6D2 247 aa10.37□□□□□ -0.75
VAMP4-203ENST00000474047 RNF126Q9BV68 326 aa10.37□□□□□ -0.75
VAMP4-203ENST00000474047 A0A087X0K7 114 aa10.36□□□□□ -0.75
VAMP4-203ENST00000474047 RPL12P30050 165 aaKnown RBP10.36□□□□□ -0.75
VAMP4-203ENST00000474047 PSG9Q00887 426 aa10.36□□□□□ -0.75
VAMP4-203ENST00000474047 RGS21Q2M5E4 152 aa10.36□□□□□ -0.75
VAMP4-203ENST00000474047 CHAC2Q8WUX2 184 aa10.36□□□□□ -0.75
VAMP4-203ENST00000474047 NPCDR1Q9BY65 106 aa10.36□□□□□ -0.75
VAMP4-203ENST00000474047 KCNIP2Q9NS61 270 aa10.36□□□□□ -0.75
VAMP4-203ENST00000474047 MBD2Q9UBB5 411 aa10.36□□□□□ -0.75
VAMP4-203ENST00000474047 A0A0J9YX75 114 aa10.36□□□□□ -0.75
VAMP4-203ENST00000474047 DEFB4AO15263 64 aa10.36□□□□□ -0.75
VAMP4-203ENST00000474047 DUSP14O95147 198 aaKnown RBP10.36□□□□□ -0.75
VAMP4-203ENST00000474047 SNRPCP09234 159 aaKnown RBP10.36□□□□□ -0.75
VAMP4-203ENST00000474047 LCN15Q6UWW0 184 aa10.36□□□□□ -0.75
VAMP4-203ENST00000474047 SCGB1C1Q8TD33 95 aa10.36□□□□□ -0.75
VAMP4-203ENST00000474047 C17orf77Q96MU5 243 aa10.36□□□□□ -0.75
VAMP4-203ENST00000474047 HSPB11Q9Y547 144 aa10.36□□□□□ -0.75
VAMP4-203ENST00000474047 TRAV8-2A0A0B4J237 113 aa10.35□□□□□ -0.75
VAMP4-203ENST00000474047 C17orf112F2Z3M2 114 aa10.35□□□□□ -0.75
VAMP4-203ENST00000474047 IFNA5P01569 189 aa10.35□□□□□ -0.75
VAMP4-203ENST00000474047 CXCL3P19876 107 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms