RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 SPINK9Q5DT21 86 aa11.77□□□□□ -0.53
LMNA-213ENST00000473598 DEFB125Q8N687 156 aa11.77□□□□□ -0.53
LMNA-213ENST00000473598 TAF15Q92804 592 aaKnown RBP eCLIP11.77□□□□□ -0.53
LMNA-213ENST00000473598 MRPL18Q9H0U6 180 aaKnown RBP11.77□□□□□ -0.53
LMNA-213ENST00000473598 SONP18583 2426 aaKnown RBP11.77□□□□□ -0.53
LMNA-213ENST00000473598 UBE2L5PA0A1B0GUS4 154 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 LY6G6DO95868 133 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 MYOD1P15172 320 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 MRGPRG-AS1Q2M3A8 158 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 FER1L6-AS1Q8NA97 138 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 OR10P1Q8NGE3 313 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 VSIRQ9H7M9 311 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 TPSG1Q9NRR2 321 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 SIGLEC9Q9Y336 463 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 TEX50A0A1B0GTY4 177 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 OR10J3Q5JRS4 329 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 AMMECR1LQ6DCA0 310 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 S100A7AQ86SG5 101 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 Q8N6K4 173 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 NPBQ8NG41 125 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 KCNS1Q96KK3 526 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 TMEM147Q9BVK8 224 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 SLC39A9Q9NUM3 307 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 TIMM9Q9Y5J7 89 aa11.76□□□□□ -0.53
LMNA-213ENST00000473598 ZFHX3Q15911 3703 aa11.75□□□□□ -0.53
LMNA-213ENST00000473598 NSD1Q96L73 2696 aaPredicted RBP11.75□□□□□ -0.53
LMNA-213ENST00000473598 TRAV9-2A0A087WT02 112 aa11.75□□□□□ -0.53
LMNA-213ENST00000473598 LOC102724200A0A096LPH7 203 aaPredicted RBP11.75□□□□□ -0.53
LMNA-213ENST00000473598 RRHO14718 337 aa11.75□□□□□ -0.53
LMNA-213ENST00000473598 NBR2O15453 112 aa11.75□□□□□ -0.53
LMNA-213ENST00000473598 FAM106CPP0CH98 169 aa11.75□□□□□ -0.53
LMNA-213ENST00000473598 RHOBP62745 196 aa11.75□□□□□ -0.53
LMNA-213ENST00000473598 VWC2Q2TAL6 325 aa11.75□□□□□ -0.53
LMNA-213ENST00000473598 PPP1R27Q86WC6 154 aa11.75□□□□□ -0.53
LMNA-213ENST00000473598 OR4F5Q8NH21 305 aa11.75□□□□□ -0.53
LMNA-213ENST00000473598 COMMD5Q9GZQ3 224 aa11.75□□□□□ -0.53
LMNA-213ENST00000473598 PLXNB1O43157 2135 aa11.75□□□□□ -0.53
LMNA-213ENST00000473598 ANK3Q12955 4377 aaKnown RBP11.74□□□□□ -0.53
LMNA-213ENST00000473598 C15orf62A8K5M9 175 aa11.74□□□□□ -0.53
LMNA-213ENST00000473598 NDUFA3O95167 84 aa11.74□□□□□ -0.53
LMNA-213ENST00000473598 IGLC1P0CG04 106 aa11.74□□□□□ -0.53
LMNA-213ENST00000473598 VDAC2P45880 294 aaPredicted RBP11.74□□□□□ -0.53
LMNA-213ENST00000473598 PRCDQ00LT1 54 aa11.74□□□□□ -0.53
LMNA-213ENST00000473598 FAM120AOSQ5T036 256 aa11.74□□□□□ -0.53
LMNA-213ENST00000473598 MMD2Q8IY49 270 aa11.74□□□□□ -0.53
LMNA-213ENST00000473598 SGMS2Q8NHU3 365 aa11.74□□□□□ -0.53
LMNA-213ENST00000473598 FBXL15Q9H469 300 aa11.74□□□□□ -0.53
LMNA-213ENST00000473598 CLEC5AQ9NY25 188 aa11.74□□□□□ -0.53
LMNA-213ENST00000473598 C3orf79P0CE67 100 aa11.74□□□□□ -0.53
LMNA-213ENST00000473598 AMTP48728 403 aa11.74□□□□□ -0.53
LMNA-213ENST00000473598 OR1L8Q8NGR8 309 aa11.74□□□□□ -0.53
LMNA-213ENST00000473598 FAM103A1Q9BTL3 118 aaKnown RBP11.74□□□□□ -0.53
LMNA-213ENST00000473598 NDUFA4L2Q9NRX3 87 aa11.74□□□□□ -0.53
LMNA-213ENST00000473598 NIPBLQ6KC79 2804 aaeCLIP11.73□□□□□ -0.531e-6■■■□□ 18.6
LMNA-213ENST00000473598 OR2T8A6NH00 312 aa11.73□□□□□ -0.53
LMNA-213ENST00000473598 CD5LO43866 347 aa11.73□□□□□ -0.53
LMNA-213ENST00000473598 SAP30O75446 220 aa11.73□□□□□ -0.53
LMNA-213ENST00000473598 ATP6V0BQ99437 205 aa11.73□□□□□ -0.53
LMNA-213ENST00000473598 HINT2Q9BX68 163 aa11.73□□□□□ -0.53
LMNA-213ENST00000473598 HEYLQ9NQ87 328 aaPredicted RBP11.73□□□□□ -0.53
LMNA-213ENST00000473598 PEF1Q9UBV8 284 aaKnown RBP11.73□□□□□ -0.53
LMNA-213ENST00000473598 CUBNO60494 3623 aa11.73□□□□□ -0.53
LMNA-213ENST00000473598 E7EUB6 86 aa11.72□□□□□ -0.53
LMNA-213ENST00000473598 FSHBP01225 129 aa11.72□□□□□ -0.53
LMNA-213ENST00000473598 PSG9Q00887 426 aa11.72□□□□□ -0.53
LMNA-213ENST00000473598 PLGLAQ15195 96 aa11.72□□□□□ -0.53
LMNA-213ENST00000473598 PLEKHA3Q9HB20 300 aa11.72□□□□□ -0.53
LMNA-213ENST00000473598 ENY2Q9NPA8 101 aa11.72□□□□□ -0.53
LMNA-213ENST00000473598 SOX21Q9Y651 276 aaPredicted RBP11.72□□□□□ -0.53
LMNA-213ENST00000473598 CTXND1A0A1B0GTU2 59 aa11.72□□□□□ -0.53
LMNA-213ENST00000473598 MDFIC2A0A1B0GVS7 189 aa11.72□□□□□ -0.53
LMNA-213ENST00000473598 CGB1A6NKQ9 187 aa11.72□□□□□ -0.53
LMNA-213ENST00000473598 STAG3L3P0CL85 134 aa11.72□□□□□ -0.53
LMNA-213ENST00000473598 C12orf54Q6X4T0 127 aa11.72□□□□□ -0.53
LMNA-213ENST00000473598 SFRP2Q96HF1 295 aa11.72□□□□□ -0.53
LMNA-213ENST00000473598 HIVEP2P31629 2446 aa11.72□□□□□ -0.53
LMNA-213ENST00000473598 SERTM2A0A1B0GWG4 89 aa11.71□□□□□ -0.53
LMNA-213ENST00000473598 FCN1O00602 326 aa11.71□□□□□ -0.53
LMNA-213ENST00000473598 ZNF324O75467 553 aaPredicted RBP11.71□□□□□ -0.53
LMNA-213ENST00000473598 ACTL6BO94805 426 aa11.71□□□□□ -0.53
LMNA-213ENST00000473598 SMIM17P0DL12 118 aa11.71□□□□□ -0.53
LMNA-213ENST00000473598 CBLN1P23435 193 aa11.71□□□□□ -0.53
LMNA-213ENST00000473598 TNXAQ16473 311 aa11.71□□□□□ -0.53
LMNA-213ENST00000473598 C5orf64Q2M2E5 130 aa11.71□□□□□ -0.53
LMNA-213ENST00000473598 C10orf55Q5SWW7 151 aa11.71□□□□□ -0.53
LMNA-213ENST00000473598 BVES-AS1Q5T3Y7 98 aa11.71□□□□□ -0.53
LMNA-213ENST00000473598 OR10W1Q8NGF6 305 aa11.71□□□□□ -0.53
LMNA-213ENST00000473598 NCBP2LA6PVI3 153 aaKnown RBP11.7□□□□□ -0.54
LMNA-213ENST00000473598 F2Z2F3 143 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 INS-IGF2F8WCM5 200 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 PDE6DO43924 150 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 MT-ND6P03923 174 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 COX19Q49B96 90 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 RPP25LQ8N5L8 163 aaKnown RBP11.7□□□□□ -0.54
LMNA-213ENST00000473598 OR1B1Q8NGR6 318 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 PIFOQ8TCI5 191 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 BORCS7Q96B45 105 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 NPCDR1Q9BY65 106 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 GNB4Q9HAV0 340 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 YAE1D1Q9NRH1 226 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms