RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 PATE2Q6UY27 113 aa10.56□□□□□ -0.72
SSR4-207ENST00000471724 STXBP6Q8NFX7 210 aa10.56□□□□□ -0.72
SSR4-207ENST00000471724 TMEM37Q8WXS4 190 aa10.56□□□□□ -0.72
SSR4-207ENST00000471724 ZNF471Q9BX82 626 aaPredicted RBP10.56□□□□□ -0.72
SSR4-207ENST00000471724 MRPL32Q9BYC8 188 aaKnown RBP10.56□□□□□ -0.72
SSR4-207ENST00000471724 SLC25A32Q9H2D1 315 aa10.56□□□□□ -0.72
SSR4-207ENST00000471724 NOTCH1P46531 2555 aa10.56□□□□□ -0.72
SSR4-207ENST00000471724 DNASE2O00115 360 aaPredicted RBP10.55□□□□□ -0.72
SSR4-207ENST00000471724 MEOX2P50222 304 aa10.55□□□□□ -0.72
SSR4-207ENST00000471724 ACOT6Q3I5F7 207 aaPredicted RBP10.55□□□□□ -0.72
SSR4-207ENST00000471724 TMUB2Q71RG4 321 aa10.55□□□□□ -0.72
SSR4-207ENST00000471724 NRN1Q9NPD7 142 aa10.55□□□□□ -0.72
SSR4-207ENST00000471724 SELENOKQ9Y6D0 94 aa10.55□□□□□ -0.72
SSR4-207ENST00000471724 IGKV3-7A0A075B6H7 116 aa10.54□□□□□ -0.72
SSR4-207ENST00000471724 ZNF785A8K8V0 405 aa10.54□□□□□ -0.72
SSR4-207ENST00000471724 MBP02144 154 aa10.54□□□□□ -0.72
SSR4-207ENST00000471724 ATF4P18848 351 aaPredicted RBP10.54□□□□□ -0.72
SSR4-207ENST00000471724 M6PRP20645 277 aa10.54□□□□□ -0.72
SSR4-207ENST00000471724 RHOBP62745 196 aa10.54□□□□□ -0.72
SSR4-207ENST00000471724 FAM78BQ5VT40 261 aa10.54□□□□□ -0.72
SSR4-207ENST00000471724 LEMD1Q68G75 181 aa10.54□□□□□ -0.72
SSR4-207ENST00000471724 BPIFA4PQ86YQ2 179 aa10.54□□□□□ -0.72
SSR4-207ENST00000471724 PRR25Q96S07 402 aa10.54□□□□□ -0.72
SSR4-207ENST00000471724 MS4A6AQ9H2W1 248 aa10.54□□□□□ -0.72
SSR4-207ENST00000471724 CYTL1Q9NRR1 136 aa10.54□□□□□ -0.72
SSR4-207ENST00000471724 TPT1P13693 172 aaKnown RBP10.53□□□□□ -0.72
SSR4-207ENST00000471724 CD81P60033 236 aa10.53□□□□□ -0.72
SSR4-207ENST00000471724 LGALSLQ3ZCW2 172 aaPredicted RBP10.53□□□□□ -0.72
SSR4-207ENST00000471724 GCSAMLQ5JQS6 135 aa10.53□□□□□ -0.72
SSR4-207ENST00000471724 C9orf62Q8N4C0 152 aa10.53□□□□□ -0.72
SSR4-207ENST00000471724 STOML3Q8TAV4 291 aa10.53□□□□□ -0.72
SSR4-207ENST00000471724 SH3BGRL3Q9H299 93 aa10.53□□□□□ -0.72
SSR4-207ENST00000471724 AURKAIP1Q9NWT8 199 aaPredicted RBP10.53□□□□□ -0.72
SSR4-207ENST00000471724 FUT9Q9Y231 359 aa10.53□□□□□ -0.72
SSR4-207ENST00000471724 SPP1P10451 314 aa10.52□□□□□ -0.73
SSR4-207ENST00000471724 TFPI2P48307 235 aa10.52□□□□□ -0.73
SSR4-207ENST00000471724 CMC4P56277 68 aaPredicted RBP10.52□□□□□ -0.73
SSR4-207ENST00000471724 TAS2R45P59539 299 aa10.52□□□□□ -0.73
SSR4-207ENST00000471724 KHDC3LQ587J8 217 aa10.52□□□□□ -0.73
SSR4-207ENST00000471724 GBGT1Q8N5D6 347 aa10.52□□□□□ -0.73
SSR4-207ENST00000471724 FAM110AQ9BQ89 295 aa10.52□□□□□ -0.73
SSR4-207ENST00000471724 A0A087X0K7 114 aa10.51□□□□□ -0.73
SSR4-207ENST00000471724 A0A1W2PPV4 95 aa10.51□□□□□ -0.73
SSR4-207ENST00000471724 K7EQG2 157 aa10.51□□□□□ -0.73
SSR4-207ENST00000471724 RAB2AP61019 212 aa10.51□□□□□ -0.73
SSR4-207ENST00000471724 SNRPD3P62318 126 aaKnown RBP10.51□□□□□ -0.73
SSR4-207ENST00000471724 TMEM41BQ5BJD5 291 aa10.51□□□□□ -0.73
SSR4-207ENST00000471724 AKR1C8PQ5T2L2 129 aa10.51□□□□□ -0.73
SSR4-207ENST00000471724 MORN5Q5VZ52 161 aa10.51□□□□□ -0.73
SSR4-207ENST00000471724 EIF5AL1Q6IS14 154 aaKnown RBP10.51□□□□□ -0.73
SSR4-207ENST00000471724 BAP18Q8IXM2 172 aa10.51□□□□□ -0.73
SSR4-207ENST00000471724 OR10G4Q8NGN3 311 aa10.51□□□□□ -0.73
SSR4-207ENST00000471724 OR10G9Q8NGN4 311 aa10.51□□□□□ -0.73
SSR4-207ENST00000471724 OR10G7Q8NGN6 311 aa10.51□□□□□ -0.73
SSR4-207ENST00000471724 DCANP1Q8TF63 244 aa10.51□□□□□ -0.73
SSR4-207ENST00000471724 SEPSECSQ9HD40 501 aaKnown RBP10.51□□□□□ -0.73
SSR4-207ENST00000471724 TMEM14CQ9P0S9 112 aa10.51□□□□□ -0.73
SSR4-207ENST00000471724 MEGF8Q7Z7M0 2845 aa10.51□□□□□ -0.73
SSR4-207ENST00000471724 ISLRO14498 428 aa10.5□□□□□ -0.73
SSR4-207ENST00000471724 SEC11BP0C7V7 166 aa10.5□□□□□ -0.73
SSR4-207ENST00000471724 CDC34P49427 236 aaPredicted RBP10.5□□□□□ -0.73
SSR4-207ENST00000471724 PSMB3P49720 205 aa10.5□□□□□ -0.73
SSR4-207ENST00000471724 GUK1Q16774 197 aa10.5□□□□□ -0.73
SSR4-207ENST00000471724 LCN15Q6UWW0 184 aa10.5□□□□□ -0.73
SSR4-207ENST00000471724 SLC51BQ86UW2 128 aa10.5□□□□□ -0.73
SSR4-207ENST00000471724 WFDC3Q8IUB2 231 aa10.5□□□□□ -0.73
SSR4-207ENST00000471724 MRAPQ8TCY5 172 aa10.5□□□□□ -0.73
SSR4-207ENST00000471724 RFNGQ9Y644 331 aa10.5□□□□□ -0.73
SSR4-207ENST00000471724 OR11H12B2RN74 326 aa10.49□□□□□ -0.73
SSR4-207ENST00000471724 MRPS12O15235 138 aaKnown RBP10.49□□□□□ -0.73
SSR4-207ENST00000471724 OR7C2O60412 319 aa10.49□□□□□ -0.73
SSR4-207ENST00000471724 CD7P09564 240 aa10.49□□□□□ -0.73
SSR4-207ENST00000471724 ID1P41134 155 aa10.49□□□□□ -0.73
SSR4-207ENST00000471724 ODF3L2Q3SX64 289 aa10.49□□□□□ -0.73
SSR4-207ENST00000471724 FAM122CQ6P4D5 195 aa10.49□□□□□ -0.73
SSR4-207ENST00000471724 MIR17HGQ75NE6 70 aa10.49□□□□□ -0.73
SSR4-207ENST00000471724 SLC50A1Q9BRV3 221 aa10.49□□□□□ -0.73
SSR4-207ENST00000471724 SLC25A2Q9BXI2 301 aa10.49□□□□□ -0.73
SSR4-207ENST00000471724 MAP6D1Q9H9H5 199 aa10.49□□□□□ -0.73
SSR4-207ENST00000471724 TRAV5A0A0B4J249 113 aa10.48□□□□□ -0.73
SSR4-207ENST00000471724 UMAD1C9J7I0 102 aa10.48□□□□□ -0.73
SSR4-207ENST00000471724 PRB2P02812 416 aaPredicted RBP10.48□□□□□ -0.73
SSR4-207ENST00000471724 ZNF688P0C7X2 276 aa10.48□□□□□ -0.73
SSR4-207ENST00000471724 IGLC2P0DOY2 106 aa10.48□□□□□ -0.73
SSR4-207ENST00000471724 SPATA31B1PQ5VZV4 182 aa10.48□□□□□ -0.73
SSR4-207ENST00000471724 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.48□□□□□ -0.73
SSR4-207ENST00000471724 PQLC2Q6ZP29 291 aa10.48□□□□□ -0.73
SSR4-207ENST00000471724 LRRC20Q8TCA0 184 aa10.48□□□□□ -0.73
SSR4-207ENST00000471724 FAM167A-AS1Q96KT0 104 aa10.48□□□□□ -0.73
SSR4-207ENST00000471724 C16orf92Q96LL3 132 aa10.48□□□□□ -0.73
SSR4-207ENST00000471724 ACTR3CQ9C0K3 210 aaPredicted RBP10.48□□□□□ -0.73
SSR4-207ENST00000471724 HRH4Q9H3N8 390 aa10.48□□□□□ -0.73
SSR4-207ENST00000471724 SMAD5-AS1Q9Y6J3 95 aa10.48□□□□□ -0.73
SSR4-207ENST00000471724 K7EIL1 84 aa10.47□□□□□ -0.73
SSR4-207ENST00000471724 SOCS3O14543 225 aa10.47□□□□□ -0.73
SSR4-207ENST00000471724 HIST1H1EP10412 219 aaKnown RBP10.47□□□□□ -0.73
SSR4-207ENST00000471724 NKX2-5P52952 324 aaPredicted RBP10.47□□□□□ -0.73
SSR4-207ENST00000471724 UBE2L3P68036 154 aaKnown RBP10.47□□□□□ -0.73
SSR4-207ENST00000471724 PDE6HQ13956 83 aa10.47□□□□□ -0.73
SSR4-207ENST00000471724 Q8N1Y9 231 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms