RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 RNF141Q8WVD5 230 aa14.53□□□□□ -0.08
PSPC1-203ENST00000471658 ZNF503Q96F45 646 aa14.53□□□□□ -0.08
PSPC1-203ENST00000471658 UBQLN2Q9UHD9 624 aa14.53□□□□□ -0.08
PSPC1-203ENST00000471658 CTXND1A0A1B0GTU2 59 aa14.52□□□□□ -0.08
PSPC1-203ENST00000471658 A0A1B0GV50 99 aa14.52□□□□□ -0.08
PSPC1-203ENST00000471658 ZNF705EA8MWA4 302 aaPredicted RBP14.52□□□□□ -0.08
PSPC1-203ENST00000471658 PYYP10082 97 aa14.52□□□□□ -0.08
PSPC1-203ENST00000471658 OR8I2Q8N0Y5 310 aa14.52□□□□□ -0.08
PSPC1-203ENST00000471658 GLMPQ8WWB7 406 aa14.52□□□□□ -0.08
PSPC1-203ENST00000471658 NARS2Q96I59 477 aaKnown RBP14.52□□□□□ -0.08
PSPC1-203ENST00000471658 SMAD5-AS1Q9Y6J3 95 aa14.52□□□□□ -0.08
PSPC1-203ENST00000471658 A0A1W2PS18 150 aa14.52□□□□□ -0.09
PSPC1-203ENST00000471658 DPPA3Q6W0C5 159 aa14.52□□□□□ -0.09
PSPC1-203ENST00000471658 MARC2Q969Z3 335 aa14.52□□□□□ -0.09
PSPC1-203ENST00000471658 TECRQ9NZ01 308 aaKnown RBP14.52□□□□□ -0.09
PSPC1-203ENST00000471658 MRPS12O15235 138 aaKnown RBP14.51□□□□□ -0.09
PSPC1-203ENST00000471658 STAG3L2P0CL84 134 aa14.51□□□□□ -0.09
PSPC1-203ENST00000471658 STAG3L3P0CL85 134 aa14.51□□□□□ -0.09
PSPC1-203ENST00000471658 S100A7AQ86SG5 101 aa14.51□□□□□ -0.09
PSPC1-203ENST00000471658 SFT2D1Q8WV19 159 aa14.51□□□□□ -0.09
PSPC1-203ENST00000471658 MBD3L1Q8WWY6 194 aa14.51□□□□□ -0.09
PSPC1-203ENST00000471658 PFDN2Q9UHV9 154 aa14.51□□□□□ -0.09
PSPC1-203ENST00000471658 MAP1LC3B2A6NCE7 125 aa14.5□□□□□ -0.09
PSPC1-203ENST00000471658 OR7C2O60412 319 aa14.5□□□□□ -0.09
PSPC1-203ENST00000471658 SAP30O75446 220 aa14.5□□□□□ -0.09
PSPC1-203ENST00000471658 H2AFB1P0C5Y9 115 aa14.5□□□□□ -0.09
PSPC1-203ENST00000471658 C1orf194Q5T5A4 169 aa14.5□□□□□ -0.09
PSPC1-203ENST00000471658 C17orf77Q96MU5 243 aa14.5□□□□□ -0.09
PSPC1-203ENST00000471658 MAP1LC3BQ9GZQ8 125 aa14.5□□□□□ -0.09
PSPC1-203ENST00000471658 TMPRSS5Q9H3S3 457 aa14.5□□□□□ -0.09
PSPC1-203ENST00000471658 IGKV3-7A0A075B6H7 116 aa14.49□□□□□ -0.09
PSPC1-203ENST00000471658 H3BTX0 84 aa14.49□□□□□ -0.09
PSPC1-203ENST00000471658 OR10J4P0C629 311 aa14.49□□□□□ -0.09
PSPC1-203ENST00000471658 ARL14EPLP0DKL9 152 aa14.49□□□□□ -0.09
PSPC1-203ENST00000471658 GP9P14770 177 aa14.49□□□□□ -0.09
PSPC1-203ENST00000471658 CD33P20138 364 aa14.49□□□□□ -0.09
PSPC1-203ENST00000471658 S100A7P31151 101 aa14.49□□□□□ -0.09
PSPC1-203ENST00000471658 TCF24Q7RTU0 167 aa14.49□□□□□ -0.09
PSPC1-203ENST00000471658 WFDC9Q8NEX5 89 aa14.49□□□□□ -0.09
PSPC1-203ENST00000471658 GRAMD2BQ96HH9 432 aa14.49□□□□□ -0.09
PSPC1-203ENST00000471658 PAXXQ9BUH6 204 aa14.49□□□□□ -0.09
PSPC1-203ENST00000471658 OR51M1Q9H341 326 aa14.49□□□□□ -0.09
PSPC1-203ENST00000471658 TAS2R45P59539 299 aa14.48□□□□□ -0.09
PSPC1-203ENST00000471658 CCL20P78556 96 aa14.48□□□□□ -0.09
PSPC1-203ENST00000471658 DEFB114Q30KQ6 69 aa14.48□□□□□ -0.09
PSPC1-203ENST00000471658 KRTAP21-3Q3LHN1 58 aa14.48□□□□□ -0.09
PSPC1-203ENST00000471658 KHDC3LQ587J8 217 aa14.48□□□□□ -0.09
PSPC1-203ENST00000471658 FAM90A2PQ658T7 463 aa14.48□□□□□ -0.09
PSPC1-203ENST00000471658 BPIFA4PQ86YQ2 179 aa14.48□□□□□ -0.09
PSPC1-203ENST00000471658 DYNLRB2Q8TF09 96 aa14.48□□□□□ -0.09
PSPC1-203ENST00000471658 TMEM231Q9H6L2 316 aa14.48□□□□□ -0.09
PSPC1-203ENST00000471658 SIGLEC8Q9NYZ4 499 aa14.48□□□□□ -0.09
PSPC1-203ENST00000471658 H3BQ15 152 aa14.48□□□□□ -0.09
PSPC1-203ENST00000471658 RPL11P62913 178 aaKnown RBP14.48□□□□□ -0.09
PSPC1-203ENST00000471658 SIGLEC15Q6ZMC9 328 aa14.48□□□□□ -0.09
PSPC1-203ENST00000471658 ZNF767PQ75MW2 155 aa14.48□□□□□ -0.09
PSPC1-203ENST00000471658 IZUMO1RA6ND01 250 aa14.47□□□□□ -0.09
PSPC1-203ENST00000471658 RPL7P18124 248 aaKnown RBP14.47□□□□□ -0.09
PSPC1-203ENST00000471658 GCHFRP30047 84 aa14.47□□□□□ -0.09
PSPC1-203ENST00000471658 CD300EQ496F6 205 aaPredicted RBP14.47□□□□□ -0.09
PSPC1-203ENST00000471658 IQCF2Q8IXL9 164 aa14.47□□□□□ -0.09
PSPC1-203ENST00000471658 GBGT1Q8N5D6 347 aa14.47□□□□□ -0.09
PSPC1-203ENST00000471658 FXYD5Q96DB9 178 aa14.47□□□□□ -0.09
PSPC1-203ENST00000471658 SAT2Q96F10 170 aaPredicted RBP14.47□□□□□ -0.09
PSPC1-203ENST00000471658 ZNF586Q9NXT0 402 aa14.47□□□□□ -0.09
PSPC1-203ENST00000471658 TMEM14CQ9P0S9 112 aa14.47□□□□□ -0.09
PSPC1-203ENST00000471658 CMYA5Q8N3K9 4069 aa14.46□□□□□ -0.09
PSPC1-203ENST00000471658 ZNF785A8K8V0 405 aa14.46□□□□□ -0.09
PSPC1-203ENST00000471658 CXorf1O96002 111 aa14.46□□□□□ -0.09
PSPC1-203ENST00000471658 NMBP08949 121 aa14.46□□□□□ -0.09
PSPC1-203ENST00000471658 IGLL1P15814 213 aa14.46□□□□□ -0.09
PSPC1-203ENST00000471658 BMI1P35226 326 aa14.46□□□□□ -0.09
PSPC1-203ENST00000471658 BLOC1S1P78537 153 aa14.46□□□□□ -0.09
PSPC1-203ENST00000471658 PQLC2Q6ZP29 291 aa14.46□□□□□ -0.09
PSPC1-203ENST00000471658 HRH4Q9H3N8 390 aa14.46□□□□□ -0.09
PSPC1-203ENST00000471658 IGLC2P0DOY2 106 aa14.45□□□□□ -0.1
PSPC1-203ENST00000471658 GALR1P47211 349 aa14.45□□□□□ -0.1
PSPC1-203ENST00000471658 UBE2L3P68036 154 aaKnown RBP14.45□□□□□ -0.1
PSPC1-203ENST00000471658 TMEM61Q8N0U2 210 aa14.45□□□□□ -0.1
PSPC1-203ENST00000471658 BLNKQ8WV28 456 aa14.45□□□□□ -0.1
PSPC1-203ENST00000471658 DNHD1Q96M86 4753 aa14.45□□□□□ -0.1
PSPC1-203ENST00000471658 HIST1H1EP10412 219 aaKnown RBP14.44□□□□□ -0.1
PSPC1-203ENST00000471658 ATF4P18848 351 aaPredicted RBP14.44□□□□□ -0.1
PSPC1-203ENST00000471658 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.44□□□□□ -0.1
PSPC1-203ENST00000471658 WFDC3Q8IUB2 231 aa14.44□□□□□ -0.1
PSPC1-203ENST00000471658 STXBP6Q8NFX7 210 aa14.44□□□□□ -0.1
PSPC1-203ENST00000471658 GPR82Q96P67 336 aa14.44□□□□□ -0.1
PSPC1-203ENST00000471658 RNF24Q9Y225 148 aa14.44□□□□□ -0.1
PSPC1-203ENST00000471658 TEX46H3BTG2 121 aa14.44□□□□□ -0.1
PSPC1-203ENST00000471658 RGS13O14921 159 aa14.44□□□□□ -0.1
PSPC1-203ENST00000471658 IGLV1-51P01701 117 aa14.44□□□□□ -0.1
PSPC1-203ENST00000471658 NBEAP1P0C6P0 100 aa14.44□□□□□ -0.1
PSPC1-203ENST00000471658 TFPI2P48307 235 aa14.44□□□□□ -0.1
PSPC1-203ENST00000471658 LRRC20Q8TCA0 184 aa14.44□□□□□ -0.1
PSPC1-203ENST00000471658 TRAV1-1A0A0B4J248 108 aa14.43□□□□□ -0.1
PSPC1-203ENST00000471658 HELTA6NFD8 242 aa14.43□□□□□ -0.1
PSPC1-203ENST00000471658 SLC17A3O00476 420 aa14.43□□□□□ -0.1
PSPC1-203ENST00000471658 C9orf66Q5T8R8 295 aa14.43□□□□□ -0.1
PSPC1-203ENST00000471658 IGFL4Q6B9Z1 124 aa14.43□□□□□ -0.1
PSPC1-203ENST00000471658 RBPMS2Q6ZRY4 209 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms